RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 MMP13P45452 471 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 MNAT1P51948 309 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 PMS2P54278 862 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 DMWDQ09019 674 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 TARBP2Q15633 366 aaKnown RBP11.74□□□□□ -0.53
SRP54-205ENST00000554803 MAEAQ7L5Y9 396 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 CPLX4Q7Z7G2 160 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 JAMLQ86YT9 394 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 DAW1Q8N136 415 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 CCDC197Q8NCU1 140 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 PJA1Q8NG27 643 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 CCHCR1Q8TD31 782 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 GRK7Q8WTQ7 553 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 RSAD2Q8WXG1 361 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 SGSM3Q96HU1 749 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 XPO6Q96QU8 1125 aaKnown RBP11.74□□□□□ -0.53
SRP54-205ENST00000554803 MYCBPQ99417 103 aaPredicted RBP11.74□□□□□ -0.53
SRP54-205ENST00000554803 ZSWIM1Q9BR11 485 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 AP1M1Q9BXS5 423 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 NIFKQ9BYG3 293 aaKnown RBP11.74□□□□□ -0.53
SRP54-205ENST00000554803 SFXN1Q9H9B4 322 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 XPNPEP1Q9NQW7 623 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 RNF19AQ9NV58 838 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 WHRNQ9P202 907 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 FBXO4Q9UKT5 387 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 USP18Q9UMW8 372 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 SMG5Q9UPR3 1016 aaKnown RBP11.74□□□□□ -0.53
SRP54-205ENST00000554803 PCDHGA2Q9Y5H1 932 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 IRAK3Q9Y616 596 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.73□□□□□ -0.53
SRP54-205ENST00000554803 SFI1A8K8P3 1242 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 KIAA0391O15091 583 aaKnown RBP11.73□□□□□ -0.53
SRP54-205ENST00000554803 RGS16O15492 202 aaPredicted RBP11.73□□□□□ -0.53
SRP54-205ENST00000554803 HBP1O60381 514 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 EXOC3O60645 756 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 ZC3H11AO75152 810 aaKnown RBP eCLIP11.73□□□□□ -0.53
SRP54-205ENST00000554803 TCEA3O75764 348 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 MYBL1P10243 752 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 HPDP32754 393 aaPredicted RBP11.73□□□□□ -0.53
SRP54-205ENST00000554803 GSCP56915 257 aaPredicted RBP11.73□□□□□ -0.53
SRP54-205ENST00000554803 XRCC4Q13426 336 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 RNF187Q5TA31 235 aaPredicted RBP11.73□□□□□ -0.53
SRP54-205ENST00000554803 OTUD6AQ7L8S5 288 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 GLYCTKQ8IVS8 523 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 CCDC13Q8IYE1 715 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 SLC44A3Q8N4M1 653 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 OLIG1Q8TAK6 271 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 GPR152Q8TDT2 470 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 TMEM40Q8WWA1 233 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 RAPGEF5Q92565 580 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 KIFAP3Q92845 792 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 SEC16BQ96JE7 1060 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 FAM167AQ96KS9 214 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 CCDC114Q96M63 670 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 ZBP1Q9H171 429 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 PLEKHA4Q9H4M7 779 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 PPCSQ9HAB8 311 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 C17orf75Q9HAS0 396 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 PARD6AQ9NPB6 346 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 GPRC5CQ9NQ84 441 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 ARHGEF3Q9NR81 526 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 NRBP2Q9NSY0 501 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 SAMD15Q9P1V8 674 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 GTF3C4Q9UKN8 822 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 ST3GAL5Q9UNP4 418 aa11.73□□□□□ -0.53
SRP54-205ENST00000554803 NOVA2Q9UNW9 492 aaKnown RBP11.73□□□□□ -0.53
SRP54-205ENST00000554803 H0YCG3 227 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 SLC30A4O14863 429 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 GPR182O15218 404 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 CYP1A2P05177 515 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 SLC1A1P43005 524 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 CASP4P49662 377 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 PDE6CP51160 858 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 DNA2P51530 1060 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 MFAP3P55082 362 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 MAGOHP61326 146 aaKnown RBP11.72□□□□□ -0.53
SRP54-205ENST00000554803 PTP4A2Q12974 167 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 IFT88Q13099 833 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 CALCOCO2Q13137 446 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 RIPK1Q13546 671 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 DSC3Q14574 896 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 EMC2Q15006 297 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 ENOX2Q16206 610 aaKnown RBP11.72□□□□□ -0.53
SRP54-205ENST00000554803 ANKRD20A8PQ5CZ79 823 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 TNFAIP8L3Q5GJ75 292 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 C15orf39Q6ZRI6 1047 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 ZNF677Q86XU0 584 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 SYCP3Q8IZU3 236 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 XXYLT1Q8NBI6 393 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 ZBTB44Q8NCP5 570 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 NXPE3Q969Y0 559 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 MAGOHBQ96A72 148 aaKnown RBP11.72□□□□□ -0.53
SRP54-205ENST00000554803 SERPINB12Q96P63 405 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 FIZ1Q96SL8 496 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 GPR88Q9GZN0 384 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 CENPHQ9H3R5 247 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 DHX33Q9H6R0 707 aaKnown RBP11.72□□□□□ -0.53
SRP54-205ENST00000554803 LRRC19Q9H756 370 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 CDHR5Q9HBB8 845 aa11.72□□□□□ -0.53
SRP54-205ENST00000554803 PPANQ9NQ55 473 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms