RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 ATAD1Q8NBU5 361 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 ZMIZ2Q8NF64 920 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 ATRIPQ8WXE1 791 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 SPATA17Q96L03 361 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 TRIM62Q9BVG3 475 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 NKX2-4Q9H2Z4 354 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 ALG13Q9NP73 1137 aaKnown RBP15.12■□□□□ 0.01
SHOX2-206ENST00000554685 CNGB3Q9NQW8 809 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 COMMD8Q9NX08 183 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 EHD2Q9NZN4 543 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 TRIM10Q9UDY6 481 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 MTUS1Q9ULD2 1270 aa15.12■□□□□ 0.01
SHOX2-206ENST00000554685 A0A1W2PPC1 479 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 FAM170AA1A519 330 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 SIGLEC16A6NMB1 481 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 TEX28O15482 410 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 ADAM12O43184 909 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 BEST1O76090 585 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 ARHGEF15O94989 841 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 MOCS3O95396 460 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 GLI1P08151 1106 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 KRT3P12035 628 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 LCP1P13796 627 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 PBX2P40425 430 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 TKTL1P51854 596 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 GNG11P61952 73 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 SLC6A3Q01959 620 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 ADCY1Q08828 1119 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 ADIGQ0VDE8 80 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 PLD1Q13393 1074 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 MAMLD1Q13495 774 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 C2CD6Q53TS8 623 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 EFHC1Q5JVL4 640 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 FAM102AQ5T9C2 384 aaPredicted RBP15.11■□□□□ 0.01
SHOX2-206ENST00000554685 PLPP4Q5VZY2 271 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 NYAP1Q6ZVC0 841 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 FAM183BPQ6ZVS7 135 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 MRPL43Q8N983 215 aaKnown RBP15.11■□□□□ 0.01
SHOX2-206ENST00000554685 FEZF2Q8TBJ5 459 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 MICAL1Q8TDZ2 1067 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 AUTS2Q8WXX7 1259 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 IRGQQ8WZA9 623 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 KCNK16Q96T55 309 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 SEPT5Q99719 369 aaPredicted RBP15.11■□□□□ 0.01
SHOX2-206ENST00000554685 RHOBTB2Q9BYZ6 727 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 FBXO44Q9H4M3 255 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 ASNSD1Q9NWL6 643 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 PAXBP1Q9Y5B6 917 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 PCDHGC5Q9Y5F6 944 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 DUSP10Q9Y6W6 482 aa15.11■□□□□ 0.01
SHOX2-206ENST00000554685 TCRBV5S1A1TA0A578 114 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 HHLA1C9JL84 531 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 GOLGA8SH3BPF8 625 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 MYO1FO00160 1098 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 FSCN2O14926 492 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 PAPSS1O43252 624 aaPredicted RBP15.1■□□□□ 0.01
SHOX2-206ENST00000554685 BUB1O43683 1085 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 RTN3O95197 1032 aaPredicted RBP15.1■□□□□ 0.01
SHOX2-206ENST00000554685 CNPP09543 421 aaKnown RBP15.1■□□□□ 0.01
SHOX2-206ENST00000554685 CACNA2D1P54289 1103 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 ETF1P62495 437 aaKnown RBP15.1■□□□□ 0.01
SHOX2-206ENST00000554685 MRPS5P82675 430 aaKnown RBP15.1■□□□□ 0.01
SHOX2-206ENST00000554685 MLLT1Q03111 559 aaPredicted RBP15.1■□□□□ 0.01
SHOX2-206ENST00000554685 DUSP4Q13115 394 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 VEPH1Q14D04 833 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 ZNF569Q5MCW4 686 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 C11orf63Q6NUN7 778 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 OLFML1Q6UWY5 402 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 CCDC149Q6ZUS6 474 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 RTL10Q7L3V2 364 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 SLC26A9Q7LBE3 791 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 ARCQ7LC44 396 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 TCEAL8Q8IYN2 117 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 NUP93Q8N1F7 819 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 TPCN2Q8NHX9 752 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 FNIP1Q8TF40 1166 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 GOLGA1Q92805 767 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 C16orf45Q96MC5 204 aaPredicted RBP15.1■□□□□ 0.01
SHOX2-206ENST00000554685 KLHL5Q96PQ7 755 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 CYP4F11Q9HBI6 524 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 OSGEPQ9NPF4 335 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 IP6K2Q9UHH9 426 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 ANAPC7Q9UJX3 599 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 NLRC5Q86WI3 1866 aa15.1■□□□□ 0.01
SHOX2-206ENST00000554685 TMEM191CA6NGB0 347 aa15.09■□□□□ 0.01
SHOX2-206ENST00000554685 C2orf71A6NGG8 1288 aa15.09■□□□□ 0.01
SHOX2-206ENST00000554685 PRRG1O14668 218 aa15.09■□□□□ 0.01
SHOX2-206ENST00000554685 GRM6O15303 877 aa15.09■□□□□ 0.01
SHOX2-206ENST00000554685 HSF2BPO75031 334 aa15.09■□□□□ 0.01
SHOX2-206ENST00000554685 ZBED1O96006 694 aa15.09■□□□□ 0.01
SHOX2-206ENST00000554685 GLUD1P00367 558 aa15.09■□□□□ 0.01
SHOX2-206ENST00000554685 ABL1P00519 1130 aa15.09■□□□□ 0.01
SHOX2-206ENST00000554685 KLRC2P26717 231 aa15.09■□□□□ 0.01
SHOX2-206ENST00000554685 ALDH1A3P47895 512 aa15.09■□□□□ 0.01
SHOX2-206ENST00000554685 SLC5A3P53794 718 aa15.09■□□□□ 0.01
SHOX2-206ENST00000554685 ERVFC1P60507 584 aa15.09■□□□□ 0.01
SHOX2-206ENST00000554685 PPP1R15BQ5SWA1 713 aa15.09■□□□□ 0.01
SHOX2-206ENST00000554685 ELMSAN1Q6PJG2 1045 aa15.09■□□□□ 0.01
SHOX2-206ENST00000554685 DENND5BQ6ZUT9 1274 aa15.09■□□□□ 0.01
SHOX2-206ENST00000554685 DAAM2Q86T65 1068 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms