RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 FAM3CQ92520 227 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 SLC5A5Q92911 643 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 LENG9Q96B70 501 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 CCDC51Q96ER9 411 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 MCRS1Q96EZ8 462 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 LOXL4Q96JB6 756 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 CLSTN3Q9BQT9 956 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 TTPALQ9BTX7 342 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 G6PC3Q9BUM1 346 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 TRMT61BQ9BVS5 477 aaKnown RBP5.35□□□□□ -1.55
ATXN3-229ENST00000554672 LSM14BQ9BX40 385 aaKnown RBP5.35□□□□□ -1.55
ATXN3-229ENST00000554672 ASPNQ9BXN1 380 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 PLA2G2FQ9BZM2 168 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 ZMYND12Q9H0C1 365 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 UNC45AQ9H3U1 944 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 BRD9Q9H8M2 597 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 TRPV5Q9NQA5 729 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 KBTBD4Q9NVX7 518 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 VTI1BQ9UEU0 232 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 NDRG2Q9UN36 371 aaKnown RBP5.35□□□□□ -1.55
ATXN3-229ENST00000554672 IPPQ9Y573 584 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 COL4A3BPQ9Y5P4 624 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 RBM8AQ9Y5S9 174 aaKnown RBP5.35□□□□□ -1.55
ATXN3-229ENST00000554672 ATRXP46100 2492 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 CACNA1IQ9P0X4 2223 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 SF3B1O75533 1304 aaKnown RBP eCLIP5.34□□□□□ -1.554e-12■■■■■ 275.7
ATXN3-229ENST00000554672 MYOCOSA0A1B0GUC4 107 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 TMEM150BA6NC51 233 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 RGS13O14921 159 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 SGSM2O43147 1006 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 GREM1O60565 184 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 DKC1O60832 514 aaKnown RBP eCLIP5.34□□□□□ -1.55
ATXN3-229ENST00000554672 PSMD10O75832 226 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 PAPSS2O95340 614 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-229ENST00000554672 CHRNB1P11230 501 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 PTPN2P17706 415 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 GLDCP23378 1020 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 HOXA6P31267 233 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 MLH1P40692 756 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 PSMC5P62195 406 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 SATB1Q01826 763 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 SPIRE1Q08AE8 756 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 LAMTOR4Q0VGL1 99 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 ELAVL2Q12926 359 aaKnown RBP5.34□□□□□ -1.55
ATXN3-229ENST00000554672 LRRC32Q14392 662 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 HSP90AA2PQ14568 343 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-229ENST00000554672 PSMD5Q16401 504 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 PFKFB3Q16875 520 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-229ENST00000554672 RTP2Q5QGT7 225 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 SNAP47Q5SQN1 464 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 FAM171A1Q5VUB5 890 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 LRCH2Q5VUJ6 765 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 NOTUMQ6P988 496 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 C1orf228Q6PIY5 440 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 ANO5Q75V66 913 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 CEP57Q86XR8 500 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 LILRA2Q8N149 483 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 REXO1Q8N1G1 1221 aaKnown RBP5.34□□□□□ -1.55
ATXN3-229ENST00000554672 GSTCDQ8NEC7 633 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 SLC7A14Q8TBB6 771 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 ZSCAN18Q8TBC5 510 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-229ENST00000554672 BICD2Q8TD16 824 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 TCP11Q8WWU5 503 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 PSPC1Q8WXF1 523 aaKnown RBP5.34□□□□□ -1.55
ATXN3-229ENST00000554672 KCNN1Q92952 543 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 CCDC136Q96JN2 1154 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 SH2D3AQ9BRG2 576 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 EIF2AQ9BY44 585 aaKnown RBP5.34□□□□□ -1.55
ATXN3-229ENST00000554672 TRIM6Q9C030 488 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-229ENST00000554672 CSRNP2Q9H175 543 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 ARRDC1-AS1Q9H2J1 176 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 MINDY3Q9H8M7 445 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 ZFP14Q9HCL3 533 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 ZNF334Q9HCZ1 680 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-229ENST00000554672 HCFC1R1Q9NWW0 138 aa5.34□□□□□ -1.55
ATXN3-229ENST00000554672 BAZ2BQ9UIF8 2168 aaKnown RBP5.33□□□□□ -1.56
ATXN3-229ENST00000554672 CCDC196A0A1B0GTZ2 297 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 FITM1A5D6W6 292 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 K7ESF4 209 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 ZNF197O14709 1029 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 SLC27A2O14975 620 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 ZNF263O14978 683 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 ADAM12O43184 909 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 ZBTB43O43298 467 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 EDIL3O43854 480 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 PSPNO60542 156 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 TSPAN1O60635 241 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 ERLIN2O94905 339 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 IGHDP01880 384 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 RHOP08100 348 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 PSMC3P17980 439 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 GDI1P31150 447 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 OR1D2P34982 312 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 GALK1P51570 392 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 PTENP60484 403 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 POU5F1BQ06416 359 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 GRIK3Q13003 919 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 SRSF5Q13243 272 aaKnown RBP5.33□□□□□ -1.56
ATXN3-229ENST00000554672 PWP1Q13610 501 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 SF3A2Q15428 464 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms