RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 NELFCDQ8IXH7 590 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 CPA6Q8N4T0 437 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 TTC16Q8NEE8 873 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 RPLP0P6Q8NHW5 317 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 ZNF507Q8TCN5 953 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 PLEKHO2Q8TD55 490 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 SCFD1Q8WVM8 642 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 ZNF516Q92618 1163 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 PAGE5Q96GU1 130 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 PCED1BQ96HM7 432 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 SPATA17Q96L03 361 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 CGRRF1Q99675 332 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 P2RY13Q9BPV8 354 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 TTLL2Q9BWV7 592 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 LINC00597Q9H2U6 94 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 DPEP3Q9H4B8 488 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 SMOC1Q9H4F8 434 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 MAGEC2Q9UBF1 373 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-215ENST00000554656 DACH1Q9UI36 760 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 ARHGAP26Q9UNA1 814 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 PCDHA5Q9Y5H7 936 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 MYH10P35580 1976 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 THADAQ6YHU6 1953 aa11.28□□□□□ -0.6
SHMT2-215ENST00000554656 MYO18AQ92614 2054 aaKnown RBP11.28□□□□□ -0.6
SHMT2-215ENST00000554656 USP24Q9UPU5 2620 aa11.27□□□□□ -0.6
SHMT2-215ENST00000554656 CCDC163A0A0D9SF12 145 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 F8VP50 259 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 CLIC2O15247 247 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 DLATP10515 647 aaKnown RBP11.27□□□□□ -0.61
SHMT2-215ENST00000554656 DRD1P21728 446 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 OPRD1P41143 372 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 IFNAR2P48551 515 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 ZNF165P49910 485 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 CYP2J2P51589 502 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 CYP27A1Q02318 531 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 MESP2Q0VG99 397 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 DPYDQ12882 1025 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 PSMD6Q15008 389 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 SNRNP35Q16560 246 aaKnown RBP11.27□□□□□ -0.61
SHMT2-215ENST00000554656 MDH1BQ5I0G3 518 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 PPM1JQ5JR12 505 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 VSTM1Q6UX27 236 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 C4orf50Q6ZRC1 276 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 SFTPA1Q8IWL2 248 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 RDH13Q8NBN7 331 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 MYCBPAPQ8TBZ2 947 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 CD101Q93033 1021 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 ATP2A3Q93084 1043 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 C7orf25Q9BPX7 421 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 XYLT2Q9H1B5 865 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 ARRDC1-AS1Q9H2J1 176 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 RMND1Q9NWS8 449 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 SLC8A2Q9UPR5 921 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 PLXND1Q9Y4D7 1925 aa11.27□□□□□ -0.61
SHMT2-215ENST00000554656 ZNF840PA6NDX5 716 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 LEFTY2O00292 366 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 CLDN5O00501 218 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 SCAMP3O14828 347 aaKnown RBP11.26□□□□□ -0.61
SHMT2-215ENST00000554656 DCLK1O15075 740 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 OLFM2O95897 454 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 ADRB1P08588 477 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 HDCP19113 662 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 GRIK1P39086 918 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 CASP4P49662 377 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 MORC3Q14149 939 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 DMC1Q14565 340 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 KCNB1Q14721 858 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 IQCB1Q15051 598 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 SURF1Q15526 300 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 PLK5Q496M5 336 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 PLA2G2CQ5R387 149 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 DENND5BQ6ZUT9 1274 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 STXBP4Q6ZWJ1 553 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 UNC13DQ70J99 1090 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 CACNA2D4Q7Z3S7 1137 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 GRAMD1CQ8IYS0 662 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 MLKLQ8NB16 471 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 ELMO3Q96BJ8 720 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 CCDC127Q96BQ5 260 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 LOXL4Q96JB6 756 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 MMS19Q96T76 1030 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 ZNF518BQ9C0D4 1074 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 RNF38Q9H0F5 515 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 BLZF1Q9H2G9 400 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 CBX8Q9HC52 389 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 KIAA1586Q9HCI6 787 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 UBE4BO95155 1302 aa11.26□□□□□ -0.61
SHMT2-215ENST00000554656 SMTNL1A8MU46 457 aa11.25□□□□□ -0.61
SHMT2-215ENST00000554656 K7EQS6 105 aa11.25□□□□□ -0.61
SHMT2-215ENST00000554656 TM4SF5O14894 197 aa11.25□□□□□ -0.61
SHMT2-215ENST00000554656 IKBKBO14920 756 aa11.25□□□□□ -0.61
SHMT2-215ENST00000554656 ATG13O75143 517 aa11.25□□□□□ -0.61
SHMT2-215ENST00000554656 TACC1O75410 805 aa11.25□□□□□ -0.61
SHMT2-215ENST00000554656 AKAP3O75969 853 aa11.25□□□□□ -0.61
SHMT2-215ENST00000554656 OAS1P00973 400 aaKnown RBP11.25□□□□□ -0.61
SHMT2-215ENST00000554656 CYP17A1P05093 508 aa11.25□□□□□ -0.61
SHMT2-215ENST00000554656 ZNF806P0C7X5 589 aa11.25□□□□□ -0.61
SHMT2-215ENST00000554656 HNRNPLP14866 589 aaKnown RBP eCLIP11.25□□□□□ -0.61
SHMT2-215ENST00000554656 PTPN1P18031 435 aaKnown RBP11.25□□□□□ -0.61
SHMT2-215ENST00000554656 TNNI1P19237 187 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms