RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 FGFR1OPO95684 399 aaKnown RBP11.3□□□□□ -0.6
SHMT2-213ENST00000554600 TARSP26639 723 aaKnown RBP11.3□□□□□ -0.6
SHMT2-213ENST00000554600 SOX9P48436 509 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 FMO5P49326 533 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 PDE6CP51160 858 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 PLCB2Q00722 1185 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 TNK2Q07912 1038 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 CETN1Q12798 172 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 TPD52L1Q16890 204 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-213ENST00000554600 PAQR9Q6ZVX9 377 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 TTC39CQ8N584 583 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 FAM3CQ92520 227 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 CYFIP2Q96F07 1278 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 HEXIM2Q96MH2 286 aaKnown RBP11.3□□□□□ -0.6
SHMT2-213ENST00000554600 GBP4Q96PP9 640 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 SLC22A12Q96S37 553 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 NELL2Q99435 816 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 ARID3AQ99856 593 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 DDX23Q9BUQ8 820 aaKnown RBP11.3□□□□□ -0.6
SHMT2-213ENST00000554600 TTLL2Q9BWV7 592 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 NUP62CLQ9H1M0 184 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 GKN1Q9NS71 199 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 CISHQ9NSE2 258 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 GTSE1Q9NYZ3 720 aa11.3□□□□□ -0.6
SHMT2-213ENST00000554600 ZFHX2Q9C0A1 2572 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-213ENST00000554600 GOLGA6L22H0YM25 854 aa11.29□□□□□ -0.6
SHMT2-213ENST00000554600 GNA14O95837 355 aa11.29□□□□□ -0.6
SHMT2-213ENST00000554600 CCDC192P0DO97 292 aa11.29□□□□□ -0.6
SHMT2-213ENST00000554600 PPP3CCP48454 512 aa11.29□□□□□ -0.6
SHMT2-213ENST00000554600 IFNAR2P48551 515 aa11.29□□□□□ -0.6
SHMT2-213ENST00000554600 SLC5A3P53794 718 aa11.29□□□□□ -0.6
SHMT2-213ENST00000554600 YWHAEP62258 255 aaKnown RBP11.29□□□□□ -0.6
SHMT2-213ENST00000554600 CUL2Q13617 745 aa11.29□□□□□ -0.6
SHMT2-213ENST00000554600 ZNF268Q14587 947 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-213ENST00000554600 ANGPT1Q15389 498 aa11.29□□□□□ -0.6
SHMT2-213ENST00000554600 ITPRIPL2Q3MIP1 535 aa11.29□□□□□ -0.6
SHMT2-213ENST00000554600 TRIM68Q6AZZ1 485 aa11.29□□□□□ -0.6
SHMT2-213ENST00000554600 PDZD8Q8NEN9 1154 aa11.29□□□□□ -0.6
SHMT2-213ENST00000554600 SCAMP5Q8TAC9 235 aa11.29□□□□□ -0.6
SHMT2-213ENST00000554600 SH3RF2Q8TEC5 729 aa11.29□□□□□ -0.6
SHMT2-213ENST00000554600 NT5C1BQ96P26 610 aa11.29□□□□□ -0.6
SHMT2-213ENST00000554600 IPO9Q96P70 1041 aaKnown RBP11.29□□□□□ -0.6
SHMT2-213ENST00000554600 HNRNPABQ99729 332 aaKnown RBP11.29□□□□□ -0.6
SHMT2-213ENST00000554600 SMOQ99835 787 aa11.29□□□□□ -0.6
SHMT2-213ENST00000554600 NACA2Q9H009 215 aa11.29□□□□□ -0.6
SHMT2-213ENST00000554600 EBF3Q9H4W6 596 aa11.29□□□□□ -0.6
SHMT2-213ENST00000554600 C8orf33Q9H7E9 229 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-213ENST00000554600 TRPV5Q9NQA5 729 aa11.29□□□□□ -0.6
SHMT2-213ENST00000554600 SPATA6Q9NWH7 488 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-213ENST00000554600 SMPD4Q9NXE4 827 aa11.29□□□□□ -0.6
SHMT2-213ENST00000554600 CHORDC1Q9UHD1 332 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-213ENST00000554600 SDK1Q7Z5N4 2213 aa11.28□□□□□ -0.6
SHMT2-213ENST00000554600 KIAA1549LQ6ZVL6 1849 aa11.28□□□□□ -0.6
SHMT2-213ENST00000554600 ZNF840PA6NDX5 716 aa11.28□□□□□ -0.6
SHMT2-213ENST00000554600 SPECC1L-ADORA2AF8WAN1 911 aa11.28□□□□□ -0.6
SHMT2-213ENST00000554600 BEST1O76090 585 aa11.28□□□□□ -0.6
SHMT2-213ENST00000554600 MBL2P11226 248 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-213ENST00000554600 GLULP15104 373 aa11.28□□□□□ -0.6
SHMT2-213ENST00000554600 CD19P15391 556 aa11.28□□□□□ -0.6
SHMT2-213ENST00000554600 MCCD1P59942 119 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-213ENST00000554600 FOXK2Q01167 660 aa11.28□□□□□ -0.6
SHMT2-213ENST00000554600 MTF1Q14872 753 aa11.28□□□□□ -0.6
SHMT2-213ENST00000554600 PPP1R26Q5T8A7 1209 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-213ENST00000554600 FOXR2Q6PJQ5 311 aa11.28□□□□□ -0.6
SHMT2-213ENST00000554600 CLEC20AQ6ZU45 233 aa11.28□□□□□ -0.6
SHMT2-213ENST00000554600 PPM1KQ8N3J5 372 aa11.28□□□□□ -0.6
SHMT2-213ENST00000554600 ZMIZ2Q8NF64 920 aa11.28□□□□□ -0.6
SHMT2-213ENST00000554600 WHAMMQ8TF30 809 aa11.28□□□□□ -0.6
SHMT2-213ENST00000554600 OSBPL6Q9BZF3 934 aa11.28□□□□□ -0.6
SHMT2-213ENST00000554600 DUS2Q9NX74 493 aaKnown RBP11.28□□□□□ -0.6
SHMT2-213ENST00000554600 GMIPQ9P107 970 aa11.28□□□□□ -0.6
SHMT2-213ENST00000554600 GCNT4Q9P109 453 aa11.28□□□□□ -0.6
SHMT2-213ENST00000554600 RWDD2AQ9UIY3 292 aa11.28□□□□□ -0.6
SHMT2-213ENST00000554600 COQ4Q9Y3A0 265 aa11.28□□□□□ -0.6
SHMT2-213ENST00000554600 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.28□□□□□ -0.6
SHMT2-213ENST00000554600 WNT6Q9Y6F9 365 aa11.28□□□□□ -0.6
SHMT2-213ENST00000554600 ARNTLO00327 626 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 SCAMP3O14828 347 aaKnown RBP11.27□□□□□ -0.61
SHMT2-213ENST00000554600 LAMTOR5O43504 91 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 AFPP02771 609 aaKnown RBP11.27□□□□□ -0.61
SHMT2-213ENST00000554600 ARSAP15289 507 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 PFKLP17858 780 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 ACO1P21399 889 aaKnown RBP11.27□□□□□ -0.61
SHMT2-213ENST00000554600 TBXAS1P24557 533 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-213ENST00000554600 CTHP32929 405 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 MAGEA9P43362 315 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 RAD23BP54727 409 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 KCNH2Q12809 1159 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 USP4Q13107 963 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 RUNX3Q13761 415 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 PON2Q15165 354 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 PDGFRLQ15198 375 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 ZNF77Q15935 545 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 HECTD3Q5T447 861 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 RALGPS2Q86X27 583 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-213ENST00000554600 C1orf210Q8IVY1 113 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 CPA6Q8N4T0 437 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 MLKLQ8NB16 471 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 SLC4A11Q8NBS3 891 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 OVCA2Q8WZ82 227 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms