RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 TOX4O94842 621 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 MECP2P51608 486 aaKnown RBP4.81□□□□□ -1.64
ATXN3-227ENST00000554491 ROR2Q01974 943 aaKnown RBP4.81□□□□□ -1.64
ATXN3-227ENST00000554491 CUL4BQ13620 913 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 WDR43Q15061 677 aaKnown RBP eCLIP4.81□□□□□ -1.64
ATXN3-227ENST00000554491 DGKDQ16760 1214 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 PLEKHG6Q3KR16 790 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 ZC3H12BQ5HYM0 836 aaKnown RBP4.81□□□□□ -1.64
ATXN3-227ENST00000554491 C1QL3Q5VWW1 255 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 ARMC3Q5W041 872 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 CCSAPQ6IQ19 270 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-227ENST00000554491 MRGPREQ86SM8 312 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 CLEC14AQ86T13 490 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 C11orf74Q86VG3 221 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 LURAP1LQ8IV03 231 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 MAB21L3Q8N8X9 362 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 APPL2Q8NEU8 664 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 WDR66Q8TBY9 1149 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 PARD3BQ8TEW8 1205 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 PPP2R3CQ969Q6 453 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 EPSTI1Q96J88 318 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 MAML3Q96JK9 1138 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 ALS2CR12Q96Q35 445 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 SPAG5Q96R06 1193 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 TCF25Q9BQ70 676 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 TNMDQ9H2S6 317 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 GBA2Q9HCG7 927 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-227ENST00000554491 TRIM39Q9HCM9 518 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 IFT57Q9NWB7 429 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 SNTG2Q9NY99 539 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 NOSIPQ9Y314 301 aaKnown RBP4.81□□□□□ -1.64
ATXN3-227ENST00000554491 SPO11Q9Y5K1 396 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 MRFAP1Q9Y605 127 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 GMEB1Q9Y692 573 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 CENPFP49454 3210 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 ZNF521Q96K83 1311 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 A0A1W2PRQ8 180 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 TLDC2A0PJX2 215 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 DYTNA2CJ06 578 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 TARSL2A2RTX5 802 aaKnown RBP4.8□□□□□ -1.64
ATXN3-227ENST00000554491 GTPBP10A4D1E9 387 aaKnown RBP4.8□□□□□ -1.64
ATXN3-227ENST00000554491 H0Y3Z8 333 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 DIAPH2O60879 1101 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 B3GALNT1O75752 331 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 RNASEH2AO75792 299 aaKnown RBP4.8□□□□□ -1.64
ATXN3-227ENST00000554491 CYP19A1P11511 503 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-227ENST00000554491 NPR1P16066 1061 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 FERP16591 822 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 DESP17661 470 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 CD9P21926 228 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 BMP5P22003 454 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 HOXC13P31276 330 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 KIF5BP33176 963 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 KIF11P52732 1056 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 ROM1Q03395 351 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 RBL2Q08999 1139 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 CCDC57Q2TAC2 916 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 KLHL40Q2TBA0 621 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 RABL6Q3YEC7 729 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-227ENST00000554491 CCDC38Q502W7 563 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 SMUG1Q53HV7 270 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 FKBP15Q5T1M5 1219 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 CFAP58Q5T655 872 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 NUGGCQ68CJ6 796 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 SLFN12LQ6IEE8 588 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 SDE2Q6IQ49 451 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 PDXDC1Q6P996 788 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 SLC30A9Q6PML9 568 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 MTHFD1LQ6UB35 978 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 RASAL3Q86YV0 1011 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 VRK3Q8IV63 474 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 TRMT2AQ8IZ69 625 aaKnown RBP4.8□□□□□ -1.64
ATXN3-227ENST00000554491 DCLK2Q8N568 766 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 PAF1Q8N7H5 531 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 MB21D1Q8N884 522 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 SPC24Q8NBT2 197 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 MSANTD4Q8NCY6 345 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 NEK11Q8NG66 645 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 OR8K1Q8NGG5 319 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 GPR150Q8NGU9 434 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 GSDMBQ8TAX9 411 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 MAGEC3Q8TD91 643 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 TRPC4APQ8TEL6 797 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.8□□□□□ -1.64
ATXN3-227ENST00000554491 APPBP2Q92624 585 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 CUL5Q93034 780 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 SNX21Q969T3 373 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 RBM41Q96IZ5 413 aaKnown RBP4.8□□□□□ -1.64
ATXN3-227ENST00000554491 ZMAT2Q96NC0 199 aaKnown RBP4.8□□□□□ -1.64
ATXN3-227ENST00000554491 PGAP2Q9UHJ9 254 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 POLG2Q9UHN1 485 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 DNAI1Q9UI46 699 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 G3BP2Q9UN86 482 aaKnown RBP4.8□□□□□ -1.64
ATXN3-227ENST00000554491 PRELID1Q9Y255 219 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 CARD8Q9Y2G2 431 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 ZNF646O15015 1829 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-227ENST00000554491 SIPA1L3O60292 1781 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-227ENST00000554491 LAMA3Q16787 3333 aa4.8□□□□□ -1.64
ATXN3-227ENST00000554491 PTPRCP08575 1304 aa4.79□□□□□ -1.64
ATXN3-227ENST00000554491 LINC00854A0A1B0GVQ3 168 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms