RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 FAM124BQ9H5Z6 455 aaPredicted RBP11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 TMEM8AQ9HCN3 771 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 SPATA6Q9NWH7 488 aaPredicted RBP11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 GCNT4Q9P109 453 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 OTOGLQ3ZCN5 2332 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 WDR87Q6ZQQ6 2873 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 PRR23AA6NEV1 266 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 SPECC1L-ADORA2AF8WAN1 911 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 CETN3O15182 167 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 SLC16A3O15427 465 aaKnown RBP11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 STX10O60499 249 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 CLSTN1O94985 981 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 RTN3O95197 1032 aaPredicted RBP11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 CKMP06732 381 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 SP9P0CG40 484 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 EPB41P11171 864 aaKnown RBP11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 CCNE1P24864 410 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 CTHP32929 405 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 PRCPP42785 496 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 RAP1GAPP47736 663 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 GCLMP48507 274 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 LRRC63Q05C16 580 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 PPP3CAQ08209 521 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 INCA1Q0VD86 236 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 USP4Q13107 963 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 LRRC32Q14392 662 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 PDGFRLQ15198 375 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 ZNF77Q15935 545 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 ITPRIPL2Q3MIP1 535 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 SCARA5Q6ZMJ2 495 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 FAM35AQ86V20 835 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 SMYD4Q8IYR2 804 aaPredicted RBP11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 CRYBG2Q8N1P7 616 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 CCDC150Q8NCX0 1101 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 OVCA2Q8WZ82 227 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 SMARCD1Q96GM5 515 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 ZFYVE19Q96K21 471 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 SLITRK1Q96PX8 696 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 TSG101Q99816 390 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 ZNF518BQ9C0D4 1074 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 DNAI2Q9GZS0 605 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 NIF3L1Q9GZT8 377 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 SDCBP2Q9H190 292 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 CYP3A43Q9HB55 503 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 DMAP1Q9NPF5 467 aaPredicted RBP11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 PRMT8Q9NR22 394 aaPredicted RBP11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 TMEM30AQ9NV96 361 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 GTSE1Q9NYZ3 720 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 TRPM5Q9NZQ8 1165 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 NDRG2Q9UN36 371 aaKnown RBP11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 ARHGAP26Q9UNA1 814 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 CCL26Q9Y258 94 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 PCDHA5Q9Y5H7 936 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 ZNF292O60281 2723 aa11.06□□□□□ -0.64
PTCD2P1-201ENST00000554393 KIAA1549LQ6ZVL6 1849 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 EP300Q09472 2414 aaPredicted RBP11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 ZNF840PA6NDX5 716 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 KINO60870 393 aaKnown RBP11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 OLFM2O95897 454 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 TRIM49P0CI25 452 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 TRIM49CP0CI26 452 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 CHRNB1P11230 501 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 MXI1P50539 228 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 NDST1P52848 882 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 CACNA2D1P54289 1103 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 USP46P62068 366 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 FKBP3Q00688 224 aaKnown RBP11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 AMPD2Q01433 879 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 STIM1Q13586 685 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 PPP2R5DQ14738 602 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 MTF1Q14872 753 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 DGKKQ5KSL6 1271 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 KRT39Q6A163 491 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 CC2D1AQ6P1N0 951 aaPredicted RBP11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 FOXR2Q6PJQ5 311 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 PAQR9Q6ZVX9 377 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 ASCL5Q7RTU5 278 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 GPIHBP1Q8IV16 184 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 FUKQ8N0W3 1084 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 ADSSL1Q8N142 457 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 NUP93Q8N1F7 819 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 SYNPOQ8N3V7 929 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 TTC39CQ8N584 583 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 PDZD8Q8NEN9 1154 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 TAS1R2Q8TE23 839 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 NELL1Q92832 810 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 ZDHHC16Q969W1 377 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 FAM126AQ9BYI3 521 aaPredicted RBP11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 LMAN1LQ9HAT1 526 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 TRPC7Q9HCX4 862 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 GKN1Q9NS71 199 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 COMMD8Q9NX08 183 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 IL37Q9NZH6 218 aa11.05□□□□□ -0.64
PTCD2P1-201ENST00000554393 ATRXP46100 2492 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 FAM92AA1XBS5 289 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 C2orf78A6NCI8 922 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 CLDN5O00501 218 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 PSMA7O14818 248 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 OAS1P00973 400 aaKnown RBP11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 HDCP19113 662 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms