RNA–Protein interactions for RNA: ENST00000554292.1

PCNX1-206, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 402 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-206ENST00000554292 TXNDC8Q6A555 127 aa30.04■■■□□ 2.4
PCNX1-206ENST00000554292 ANKRD52Q8NB46 1076 aa30.04■■■□□ 2.4
PCNX1-206ENST00000554292 KIF9Q9HAQ2 790 aa30.04■■■□□ 2.4
PCNX1-206ENST00000554292 TRPC7Q9HCX4 862 aa30.04■■■□□ 2.4
PCNX1-206ENST00000554292 IL37Q9NZH6 218 aa30.04■■■□□ 2.4
PCNX1-206ENST00000554292 FBXL21Q9UKT6 434 aa30.04■■■□□ 2.4
PCNX1-206ENST00000554292 CNTN6Q9UQ52 1028 aa30.04■■■□□ 2.4
PCNX1-206ENST00000554292 HELZP42694 1942 aaKnown RBP30.04■■■□□ 2.4
PCNX1-206ENST00000554292 TMEM221A6NGB7 291 aa30.03■■■□□ 2.4
PCNX1-206ENST00000554292 M0R296 226 aa30.03■■■□□ 2.4
PCNX1-206ENST00000554292 PSMC3P17980 439 aa30.03■■■□□ 2.4
PCNX1-206ENST00000554292 VIPR2P41587 438 aa30.03■■■□□ 2.4
PCNX1-206ENST00000554292 ZNF165P49910 485 aa30.03■■■□□ 2.4
PCNX1-206ENST00000554292 PFKPQ01813 784 aa30.03■■■□□ 2.4
PCNX1-206ENST00000554292 NCAPHQ15003 741 aa30.03■■■□□ 2.4
PCNX1-206ENST00000554292 FUCA2Q9BTY2 467 aa30.03■■■□□ 2.4
PCNX1-206ENST00000554292 VPS16Q9H269 839 aa30.03■■■□□ 2.4
PCNX1-206ENST00000554292 LIMA1Q9UHB6 759 aaKnown RBP30.03■■■□□ 2.4
PCNX1-206ENST00000554292 TSPAN16Q9UKR8 245 aa30.03■■■□□ 2.4
PCNX1-206ENST00000554292 HEPACAM2A8MVW5 462 aa30.02■■■□□ 2.4
PCNX1-206ENST00000554292 USP17L7P0C7H9 530 aa30.02■■■□□ 2.4
PCNX1-206ENST00000554292 RFX1P22670 979 aa30.02■■■□□ 2.4
PCNX1-206ENST00000554292 ZNF132P52740 706 aa30.02■■■□□ 2.4
PCNX1-206ENST00000554292 VITQ6UXI7 678 aa30.02■■■□□ 2.4
PCNX1-206ENST00000554292 MFSD6LQ8IWD5 586 aa30.02■■■□□ 2.4
PCNX1-206ENST00000554292 YAF2Q8IY57 180 aa30.02■■■□□ 2.4
PCNX1-206ENST00000554292 CELF5Q8N6W0 485 aaKnown RBP30.02■■■□□ 2.4
PCNX1-206ENST00000554292 SCAMP5Q8TAC9 235 aa30.02■■■□□ 2.4
PCNX1-206ENST00000554292 TRMT61BQ9BVS5 477 aaKnown RBP30.02■■■□□ 2.4
PCNX1-206ENST00000554292 UBXN6Q9BZV1 441 aa30.02■■■□□ 2.4
PCNX1-206ENST00000554292 WNT16Q9UBV4 365 aa30.02■■■□□ 2.4
PCNX1-206ENST00000554292 FAM92AA1XBS5 289 aa30.01■■■□□ 2.39
PCNX1-206ENST00000554292 ZNF840PA6NDX5 716 aa30.01■■■□□ 2.39
PCNX1-206ENST00000554292 O00370 1275 aa30.01■■■□□ 2.39
PCNX1-206ENST00000554292 CKMP06732 381 aa30.01■■■□□ 2.39
PCNX1-206ENST00000554292 ZNF18P17022 549 aa30.01■■■□□ 2.39
PCNX1-206ENST00000554292 BST2Q10589 180 aaKnown RBP30.01■■■□□ 2.39
PCNX1-206ENST00000554292 GJB7Q6PEY0 223 aa30.01■■■□□ 2.39
PCNX1-206ENST00000554292 PLA2G2FQ9BZM2 168 aa30.01■■■□□ 2.39
PCNX1-206ENST00000554292 SIX2Q9NPC8 291 aa30.01■■■□□ 2.39
PCNX1-206ENST00000554292 TDP1Q9NUW8 608 aa30.01■■■□□ 2.39
PCNX1-206ENST00000554292 FAM86C2PA6NEL3 165 aa30■■■□□ 2.39
PCNX1-206ENST00000554292 BECN2A8MW95 431 aa30■■■□□ 2.39
PCNX1-206ENST00000554292 PRR33A8MZF0 331 aa30■■■□□ 2.39
PCNX1-206ENST00000554292 HHLA1C9JL84 531 aa30■■■□□ 2.39
PCNX1-206ENST00000554292 PRAMEF12O95522 483 aa30■■■□□ 2.39
PCNX1-206ENST00000554292 CAVIN2O95810 425 aa30■■■□□ 2.39
PCNX1-206ENST00000554292 ABL1P00519 1130 aa30■■■□□ 2.39
PCNX1-206ENST00000554292 CFHP08603 1231 aa30■■■□□ 2.39
PCNX1-206ENST00000554292 SETSIPP0DME0 302 aa30■■■□□ 2.39
PCNX1-206ENST00000554292 COPB1P53618 953 aaKnown RBP30■■■□□ 2.39
PCNX1-206ENST00000554292 GPC5P78333 572 aa30■■■□□ 2.39
PCNX1-206ENST00000554292 ZNF268Q14587 947 aaPredicted RBP30■■■□□ 2.39
PCNX1-206ENST00000554292 ARHGAP44Q17R89 818 aa30■■■□□ 2.39
PCNX1-206ENST00000554292 LCLAT1Q6UWP7 414 aa30■■■□□ 2.39
PCNX1-206ENST00000554292 ASIC4Q96FT7 647 aa30■■■□□ 2.39
PCNX1-206ENST00000554292 BRD9Q9H8M2 597 aa30■■■□□ 2.39
PCNX1-206ENST00000554292 RNF225M0QZC1 329 aaPredicted RBP29.99■■■□□ 2.39
PCNX1-206ENST00000554292 GRM2Q14416 872 aa29.99■■■□□ 2.39
PCNX1-206ENST00000554292 CNGA2Q16280 664 aa29.99■■■□□ 2.39
PCNX1-206ENST00000554292 ZSCAN23Q3MJ62 389 aa29.99■■■□□ 2.39
PCNX1-206ENST00000554292 TTC30AQ86WT1 665 aa29.99■■■□□ 2.39
PCNX1-206ENST00000554292 SHC3Q92529 594 aa29.99■■■□□ 2.39
PCNX1-206ENST00000554292 IRF7Q92985 503 aa29.99■■■□□ 2.39
PCNX1-206ENST00000554292 C11orf16Q9NQ32 467 aa29.99■■■□□ 2.39
PCNX1-206ENST00000554292 TLR8Q9NR97 1041 aaKnown RBP29.99■■■□□ 2.39
PCNX1-206ENST00000554292 DNAJC12Q9UKB3 198 aa29.99■■■□□ 2.39
PCNX1-206ENST00000554292 WDR3Q9UNX4 943 aaKnown RBP eCLIP29.99■■■□□ 2.39
PCNX1-206ENST00000554292 SCML2Q9UQR0 700 aa29.99■■■□□ 2.39
PCNX1-206ENST00000554292 TRIOO75962 3097 aa29.98■■■□□ 2.39
PCNX1-206ENST00000554292 XPO1O14980 1071 aaKnown RBP29.98■■■□□ 2.39
PCNX1-206ENST00000554292 HDCP19113 662 aa29.98■■■□□ 2.39
PCNX1-206ENST00000554292 GPRIN1Q7Z2K8 1008 aa29.98■■■□□ 2.39
PCNX1-206ENST00000554292 BMP8AQ7Z5Y6 402 aa29.98■■■□□ 2.39
PCNX1-206ENST00000554292 DHX40Q8IX18 779 aaKnown RBP29.98■■■□□ 2.39
PCNX1-206ENST00000554292 BPIFB1Q8TDL5 484 aa29.98■■■□□ 2.39
PCNX1-206ENST00000554292 TFAP2BQ92481 460 aa29.98■■■□□ 2.39
PCNX1-206ENST00000554292 DNASE1L2Q92874 299 aa29.98■■■□□ 2.39
PCNX1-206ENST00000554292 LSM14BQ9BX40 385 aaKnown RBP29.98■■■□□ 2.39
PCNX1-206ENST00000554292 THG1LQ9NWX6 298 aaKnown RBP29.98■■■□□ 2.39
PCNX1-206ENST00000554292 GMIPQ9P107 970 aa29.98■■■□□ 2.39
PCNX1-206ENST00000554292 KIF26AQ9ULI4 1882 aaPredicted RBP29.97■■■□□ 2.39
PCNX1-206ENST00000554292 C2orf78A6NCI8 922 aa29.97■■■□□ 2.39
PCNX1-206ENST00000554292 LGALS16A8MUM7 142 aa29.97■■■□□ 2.39
PCNX1-206ENST00000554292 ZNF263O14978 683 aa29.97■■■□□ 2.39
PCNX1-206ENST00000554292 MED7O43513 233 aa29.97■■■□□ 2.39
PCNX1-206ENST00000554292 BRD2P25440 801 aaKnown RBP29.97■■■□□ 2.39
PCNX1-206ENST00000554292 GDI1P31150 447 aa29.97■■■□□ 2.39
PCNX1-206ENST00000554292 USP8P40818 1118 aa29.97■■■□□ 2.39
PCNX1-206ENST00000554292 TUBP50607 506 aa29.97■■■□□ 2.39
PCNX1-206ENST00000554292 KIF11P52732 1056 aa29.97■■■□□ 2.39
PCNX1-206ENST00000554292 APBA1Q02410 837 aa29.97■■■□□ 2.39
PCNX1-206ENST00000554292 FCHO2Q0JRZ9 810 aa29.97■■■□□ 2.39
PCNX1-206ENST00000554292 KCNMA1Q12791 1236 aa29.97■■■□□ 2.39
PCNX1-206ENST00000554292 ARHGAP29Q52LW3 1261 aa29.97■■■□□ 2.39
PCNX1-206ENST00000554292 SNX30Q5VWJ9 437 aa29.97■■■□□ 2.39
PCNX1-206ENST00000554292 PIGZQ86VD9 579 aa29.97■■■□□ 2.39
PCNX1-206ENST00000554292 ARL14EPQ8N8R7 260 aaPredicted RBP29.97■■■□□ 2.39
PCNX1-206ENST00000554292 USP13Q92995 863 aaPredicted RBP29.97■■■□□ 2.39
PCNX1-206ENST00000554292 RSPRY1Q96DX4 576 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms