RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 A8MXQ7 604 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 SLC9A3R1O14745 358 aaPredicted RBP7.03□□□□□ -1.28
SLIRP-203ENST00000554074 MAPK13O15264 365 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 PHACTR2O75167 634 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 RTN3O95197 1032 aaPredicted RBP7.03□□□□□ -1.28
SLIRP-203ENST00000554074 KIF20AO95235 890 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 OAS1P00973 400 aaKnown RBP7.03□□□□□ -1.28
SLIRP-203ENST00000554074 EGFP01133 1207 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 C4BPAP04003 597 aaKnown RBP7.03□□□□□ -1.28
SLIRP-203ENST00000554074 P4HA1P13674 534 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 PFKFB1P16118 471 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 EIF2DP41214 584 aaKnown RBP7.03□□□□□ -1.28
SLIRP-203ENST00000554074 TUBP50607 506 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 GALK1P51570 392 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 MCCD1P59942 119 aaPredicted RBP7.03□□□□□ -1.28
SLIRP-203ENST00000554074 USP46P62068 366 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 KRT85P78386 507 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 DMWDQ09019 674 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 NCOA4Q13772 614 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 CSRP2Q16527 193 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 SGSM1Q2NKQ1 1148 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 ZNF699Q32M78 642 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 FOXD4L6Q3SYB3 417 aaPredicted RBP7.03□□□□□ -1.28
SLIRP-203ENST00000554074 KMT5BQ4FZB7 885 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 ZNF667Q5HYK9 610 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 FOXD4L5Q5VV16 416 aaPredicted RBP7.03□□□□□ -1.28
SLIRP-203ENST00000554074 SNX30Q5VWJ9 437 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 PKN3Q6P5Z2 889 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 FOXD4L3Q6VB84 417 aaPredicted RBP7.03□□□□□ -1.28
SLIRP-203ENST00000554074 PRR23BQ6ZRT6 265 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 SYT13Q7L8C5 426 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.03□□□□□ -1.28
SLIRP-203ENST00000554074 DDX42Q86XP3 938 aaKnown RBP eCLIP7.03□□□□□ -1.28
SLIRP-203ENST00000554074 GRAMD1CQ8IYS0 662 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 NUP93Q8N1F7 819 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 PLEKHO2Q8TD55 490 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 GAB3Q8WWW8 586 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 FOXD4L4Q8WXT5 416 aaPredicted RBP7.03□□□□□ -1.28
SLIRP-203ENST00000554074 CD101Q93033 1021 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 ACDQ96AP0 544 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 SMARCD1Q96GM5 515 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 ZC3H10Q96K80 434 aaKnown RBP7.03□□□□□ -1.28
SLIRP-203ENST00000554074 TNIP3Q96KP6 325 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 B3GNT5Q9BYG0 378 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 ZNF518BQ9C0D4 1074 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 PARD6AQ9NPB6 346 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 TMEM30AQ9NV96 361 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 C2orf42Q9NWW7 574 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 IL37Q9NZH6 218 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 EBF1Q9UH73 591 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 CDV3Q9UKY7 258 aaKnown RBP7.03□□□□□ -1.28
SLIRP-203ENST00000554074 USP18Q9UMW8 372 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 SLC8A2Q9UPR5 921 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 TRAF3IP3Q9Y228 551 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 WNT6Q9Y6F9 365 aa7.03□□□□□ -1.28
SLIRP-203ENST00000554074 LAMA1P25391 3075 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 A0A1W2PQ27 194 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 A0A1W2PQ64 194 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 A0A1W2PQD8 194 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 PCNX2A6NKB5 2137 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 LEFTY2O00292 366 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 TNFRSF10BO14763 440 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 RNF40O75150 1001 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 RPP40O75818 363 aaKnown RBP7.02□□□□□ -1.29
SLIRP-203ENST00000554074 RHOBTB3O94955 611 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 VNN1O95497 513 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 ASS1P00966 412 aaKnown RBP7.02□□□□□ -1.29
SLIRP-203ENST00000554074 NR3C1P04150 777 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 ZDHHC11BP0C7U3 371 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 YWHAQP27348 245 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 RAP1GAPP47736 663 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 CASP4P49662 377 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 ATXN1P54253 815 aaKnown RBP7.02□□□□□ -1.29
SLIRP-203ENST00000554074 CACNA2D1P54289 1103 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 ZXDBP98169 803 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 SPEM2Q0P670 501 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 TAF10Q12962 218 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 BIRC3Q13489 604 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 GAB4Q2WGN9 574 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 HEATR6Q6AI08 1181 aaKnown RBP7.02□□□□□ -1.29
SLIRP-203ENST00000554074 PRR23CQ6ZRP0 262 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 PAQR9Q6ZVX9 377 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 CEP68Q76N32 757 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 CACNA2D4Q7Z3S7 1137 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 FAM35AQ86V20 835 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 UNC93AQ86WB7 457 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 CRYBG2Q8N1P7 616 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 FAM160A2Q8N612 972 aaPredicted RBP7.02□□□□□ -1.29
SLIRP-203ENST00000554074 NETO1Q8TDF5 533 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 EZH1Q92800 747 aaPredicted RBP7.02□□□□□ -1.29
SLIRP-203ENST00000554074 CCDC47Q96A33 483 aaKnown RBP7.02□□□□□ -1.29
SLIRP-203ENST00000554074 OTUB2Q96DC9 234 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 FAXDC2Q96IV6 333 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 SPATA32Q96LK8 384 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 SCAND2PQ9GZW5 306 aaPredicted RBP7.02□□□□□ -1.29
SLIRP-203ENST00000554074 RNF38Q9H0F5 515 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 LINC00597Q9H2U6 94 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 DPEP3Q9H4B8 488 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 SMYD3Q9H7B4 428 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 FBRSL1Q9HCM7 1045 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms