RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 TAS2R14Q9NYV8 317 aa15.28■□□□□ 0.04
SHMT2-210ENST00000553950 CNOT8Q9UFF9 292 aaKnown RBP15.28■□□□□ 0.04
SHMT2-210ENST00000553950 FBXW11Q9UKB1 542 aa15.28■□□□□ 0.04
SHMT2-210ENST00000553950 PYCARDQ9ULZ3 195 aa15.28■□□□□ 0.04
SHMT2-210ENST00000553950 REXO2Q9Y3B8 237 aaKnown RBP15.28■□□□□ 0.04
SHMT2-210ENST00000553950 YIPF1Q9Y548 306 aa15.28■□□□□ 0.04
SHMT2-210ENST00000553950 TNRC18O15417 2968 aaPredicted RBP15.28■□□□□ 0.04
SHMT2-210ENST00000553950 E5RJQ4 531 aa15.27■□□□□ 0.04
SHMT2-210ENST00000553950 F8VP50 259 aa15.27■□□□□ 0.04
SHMT2-210ENST00000553950 ADAM12O43184 909 aa15.27■□□□□ 0.04
SHMT2-210ENST00000553950 DNAJB1P25685 340 aa15.27■□□□□ 0.04
SHMT2-210ENST00000553950 ADIGQ0VDE8 80 aa15.27■□□□□ 0.04
SHMT2-210ENST00000553950 TCEAL1Q15170 157 aa15.27■□□□□ 0.04
SHMT2-210ENST00000553950 RAB41Q5JT25 222 aa15.27■□□□□ 0.04
SHMT2-210ENST00000553950 PMF1Q6P1K2 205 aa15.27■□□□□ 0.04
SHMT2-210ENST00000553950 ITIH5Q86UX2 942 aa15.27■□□□□ 0.04
SHMT2-210ENST00000553950 CCAR2Q8N163 923 aaKnown RBP15.27■□□□□ 0.04
SHMT2-210ENST00000553950 ELMOD1Q8N336 334 aa15.27■□□□□ 0.04
SHMT2-210ENST00000553950 ARHGAP18Q8N392 663 aa15.27■□□□□ 0.04
SHMT2-210ENST00000553950 WDTC1Q8N5D0 677 aa15.27■□□□□ 0.04
SHMT2-210ENST00000553950 RNF10Q8N5U6 811 aaKnown RBP15.27■□□□□ 0.04
SHMT2-210ENST00000553950 ATAD1Q8NBU5 361 aa15.27■□□□□ 0.04
SHMT2-210ENST00000553950 SELENOOQ9BVL4 669 aa15.27■□□□□ 0.04
SHMT2-210ENST00000553950 THAP2Q9H0W7 228 aa15.27■□□□□ 0.04
SHMT2-210ENST00000553950 ASNSD1Q9NWL6 643 aa15.27■□□□□ 0.04
SHMT2-210ENST00000553950 LMCD1Q9NZU5 365 aa15.27■□□□□ 0.04
SHMT2-210ENST00000553950 ASB3Q9Y575 518 aa15.27■□□□□ 0.04
SHMT2-210ENST00000553950 CYP1A2P05177 515 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 GLI1P08151 1106 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 CSH1P0DML2 217 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 CSH2P0DML3 217 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 HOXA9P31269 272 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 RGS7P49802 495 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 SLC5A3P53794 718 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 EPHB3P54753 998 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 HADHBP55084 474 aaKnown RBP15.26■□□□□ 0.03
SHMT2-210ENST00000553950 PTP4A2Q12974 167 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 DUSP4Q13115 394 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 EFHC1Q5JVL4 640 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 DENND5BQ6ZUT9 1274 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 NUP93Q8N1F7 819 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 PDZD8Q8NEN9 1154 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 ZMIZ2Q8NF64 920 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 UBE2Q2Q8WVN8 375 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 ALS2CR12Q96Q35 445 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 ZNF576Q9H609 170 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 TMEM51Q9NW97 253 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 UXTQ9UBK9 157 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-210ENST00000553950 CYTH4Q9UIA0 394 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 INSL5Q9Y5Q6 135 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 MYO9BQ13459 2157 aa15.26■□□□□ 0.03
SHMT2-210ENST00000553950 OBSL1O75147 1896 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 HIDE1A8MVS5 230 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 HHLA1C9JL84 531 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 TGM5O43548 720 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 HSF2BPO75031 334 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 MTA2O94776 668 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 LRG1P02750 347 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 ERBB2P04626 1255 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 POU2F2P09086 479 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 RRM1P23921 792 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 CLCN4P51793 760 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 TKTL1P51854 596 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 TAF12Q16514 161 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 FAM102AQ5T9C2 384 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-210ENST00000553950 OR6B2Q6IFH4 312 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 PLEKHA7Q6IQ23 1121 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 SLC26A9Q7LBE3 791 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 ARCQ7LC44 396 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 SPRED2Q7Z698 418 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 XYLT1Q86Y38 959 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 KREMEN2Q8NCW0 462 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 OVCA2Q8WZ82 227 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 MCRS1Q96EZ8 462 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 PACSIN1Q9BY11 444 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 RHOBTB2Q9BYZ6 727 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 NSUN3Q9H649 340 aaKnown RBP15.25■□□□□ 0.03
SHMT2-210ENST00000553950 CERS4Q9HA82 394 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 DZANK1Q9NVP4 752 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 CTTNBP2NLQ9P2B4 639 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 MYO1AQ9UBC5 1043 aa15.25■□□□□ 0.03
SHMT2-210ENST00000553950 COLQQ9Y215 455 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-210ENST00000553950 DENND4CQ5VZ89 1909 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 TULP2O00295 520 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 KIF5CO60282 957 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 BEST1O76090 585 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 VNN2O95498 520 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 ZBED1O96006 694 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 C8AP07357 584 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 HNRNPA1P09651 372 aaKnown RBP eCLIP15.24■□□□□ 0.03
SHMT2-210ENST00000553950 LCP1P13796 627 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 IRS1P35568 1242 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 PSEN1P49768 467 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 CACNA2D1P54289 1103 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 MRPS5P82675 430 aaKnown RBP15.24■□□□□ 0.03
SHMT2-210ENST00000553950 SLC6A3Q01959 620 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 CAMK1Q14012 370 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 CYP4A22Q5TCH4 519 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 ZNF697Q5TEC3 545 aa15.24■□□□□ 0.03
SHMT2-210ENST00000553950 DCUN1D2Q6PH85 259 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms