RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 TANGO2Q6ICL3 276 aa9.87□□□□□ -0.83
CHD8-206ENST00000553870 DPY19L2P1Q6NXN4 242 aa9.87□□□□□ -0.83
CHD8-206ENST00000553870 TRIM67Q6ZTA4 783 aa9.87□□□□□ -0.83
CHD8-206ENST00000553870 BMP8AQ7Z5Y6 402 aa9.87□□□□□ -0.83
CHD8-206ENST00000553870 ARID3BQ8IVW6 561 aaPredicted RBP9.87□□□□□ -0.83
CHD8-206ENST00000553870 MFSD6LQ8IWD5 586 aa9.87□□□□□ -0.83
CHD8-206ENST00000553870 DHX40Q8IX18 779 aaKnown RBP9.87□□□□□ -0.83
CHD8-206ENST00000553870 ZNF276Q8N554 614 aa9.87□□□□□ -0.83
CHD8-206ENST00000553870 CELF5Q8N6W0 485 aaKnown RBP9.87□□□□□ -0.83
CHD8-206ENST00000553870 RBBP8NLQ8NC74 664 aaPredicted RBP9.87□□□□□ -0.83
CHD8-206ENST00000553870 STKLD1Q8NE28 680 aa9.87□□□□□ -0.83
CHD8-206ENST00000553870 SHC3Q92529 594 aa9.87□□□□□ -0.83
CHD8-206ENST00000553870 KHSRPQ92945 711 aaKnown RBP eCLIP9.87□□□□□ -0.83
CHD8-206ENST00000553870 KAT5Q92993 513 aa9.87□□□□□ -0.83
CHD8-206ENST00000553870 VPS16Q9H269 839 aa9.87□□□□□ -0.83
CHD8-206ENST00000553870 HSD3B7Q9H2F3 369 aa9.87□□□□□ -0.83
CHD8-206ENST00000553870 EPHX3Q9H6B9 360 aa9.87□□□□□ -0.83
CHD8-206ENST00000553870 KIF9Q9HAQ2 790 aa9.87□□□□□ -0.83
CHD8-206ENST00000553870 TRPV5Q9NQA5 729 aa9.87□□□□□ -0.83
CHD8-206ENST00000553870 TMEM30AQ9NV96 361 aa9.87□□□□□ -0.83
CHD8-206ENST00000553870 TAB2Q9NYJ8 693 aa9.87□□□□□ -0.83
CHD8-206ENST00000553870 DNAJC12Q9UKB3 198 aa9.87□□□□□ -0.83
CHD8-206ENST00000553870 SCML2Q9UQR0 700 aa9.87□□□□□ -0.83
CHD8-206ENST00000553870 USP3Q9Y6I4 520 aa9.87□□□□□ -0.83
CHD8-206ENST00000553870 PTPRDP23468 1912 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 LGALS16A8MUM7 142 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 HHLA1C9JL84 531 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 RNF225M0QZC1 329 aaPredicted RBP9.86□□□□□ -0.83
CHD8-206ENST00000553870 O00370 1275 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 XPO1O14980 1071 aaKnown RBP9.86□□□□□ -0.83
CHD8-206ENST00000553870 BEST1O76090 585 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 ZDHHC11BP0C7U3 371 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 SETSIPP0DME0 302 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 KRT5P13647 590 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 TCF3P15923 654 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 HDCP19113 662 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 FCARP24071 287 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 TUBP50607 506 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 KIF11P52732 1056 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 MLLT6P55198 1093 aaPredicted RBP9.86□□□□□ -0.83
CHD8-206ENST00000553870 USP46P62068 366 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 PLCB2Q00722 1185 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 PTK2Q05397 1052 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 FCHO2Q0JRZ9 810 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 BST2Q10589 180 aaKnown RBP9.86□□□□□ -0.83
CHD8-206ENST00000553870 FILIP1LQ4L180 1135 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 PKDCCQ504Y2 493 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 RAB41Q5JT25 222 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 KLHDC7AQ5VTJ3 777 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 TXNDC8Q6A555 127 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 AOPEPQ8N6M6 819 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 MAB21L3Q8N8X9 362 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 SCAMP5Q8TAC9 235 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 RSAD2Q8WXG1 361 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 KCTD13Q8WZ19 329 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 DNASE1L2Q92874 299 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 IRF7Q92985 503 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 FBXO32Q969P5 355 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 HSFY1Q96LI6 401 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 ERGIC2Q96RQ1 377 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 RPP25Q9BUL9 199 aaKnown RBP9.86□□□□□ -0.83
CHD8-206ENST00000553870 TRMT61BQ9BVS5 477 aaKnown RBP9.86□□□□□ -0.83
CHD8-206ENST00000553870 STK33Q9BYT3 514 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 SIX2Q9NPC8 291 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 TLR8Q9NR97 1041 aaKnown RBP9.86□□□□□ -0.83
CHD8-206ENST00000553870 TDP1Q9NUW8 608 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 THG1LQ9NWX6 298 aaKnown RBP9.86□□□□□ -0.83
CHD8-206ENST00000553870 TSPAN16Q9UKR8 245 aa9.86□□□□□ -0.83
CHD8-206ENST00000553870 C5orf42Q9H799 3197 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 HEPACAM2A8MVW5 462 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 PRR33A8MZF0 331 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 FOXN3O00409 490 aaPredicted RBP9.85□□□□□ -0.83
CHD8-206ENST00000553870 NRG2O14511 850 aaPredicted RBP9.85□□□□□ -0.83
CHD8-206ENST00000553870 CHADO15335 359 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 TADA3O75528 432 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 OLFM2O95897 454 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 UCHL3P15374 230 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 VIPR2P41587 438 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 PLA2G4AP47712 749 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 GPC5P78333 572 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 SLC7A9P82251 487 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 CYP4F8P98187 520 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 UBXN1Q04323 297 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 PDE4CQ08493 712 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 ARHGAP44Q17R89 818 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 GOLGA7BQ2TAP0 167 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 ARHGAP29Q52LW3 1261 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 TMEM31Q5JXX7 168 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 STXBP5Q5T5C0 1151 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 PM20D1Q6GTS8 502 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 KLHDC10Q6PID8 442 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 APTXQ7Z2E3 356 aaKnown RBP9.85□□□□□ -0.83
CHD8-206ENST00000553870 CCDC186Q7Z3E2 898 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 TADA2BQ86TJ2 420 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 PIGZQ86VD9 579 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 TTC30AQ86WT1 665 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 DDX42Q86XP3 938 aaKnown RBP eCLIP9.85□□□□□ -0.83
CHD8-206ENST00000553870 YAF2Q8IY57 180 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 FAM71AQ8IYT1 594 aa9.85□□□□□ -0.83
CHD8-206ENST00000553870 SCML4Q8N228 414 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms