RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 AMFRQ9UKV5 643 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 FNDC1Q4ZHG4 1894 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-210ENST00000553693 MBD3L4A6NDZ8 208 aaPredicted RBP4.91□□□□□ -1.62
SCFD1-210ENST00000553693 MBD3L3A6NE82 208 aaPredicted RBP4.91□□□□□ -1.62
SCFD1-210ENST00000553693 FRS3O43559 492 aa4.91□□□□□ -1.62
SCFD1-210ENST00000553693 PDE8BO95263 885 aa4.91□□□□□ -1.62
SCFD1-210ENST00000553693 PHKG2P15735 406 aa4.91□□□□□ -1.62
SCFD1-210ENST00000553693 KLRC1P26715 233 aa4.91□□□□□ -1.62
SCFD1-210ENST00000553693 RENBPP51606 427 aa4.91□□□□□ -1.62
SCFD1-210ENST00000553693 BCAT1P54687 386 aa4.91□□□□□ -1.62
SCFD1-210ENST00000553693 ETFDHQ16134 617 aa4.91□□□□□ -1.62
SCFD1-210ENST00000553693 SUPT20HL1Q3ZLR7 823 aa4.91□□□□□ -1.62
SCFD1-210ENST00000553693 DCAF12L1Q5VU92 463 aa4.91□□□□□ -1.62
SCFD1-210ENST00000553693 C11orf87Q6NUJ2 197 aa4.91□□□□□ -1.62
SCFD1-210ENST00000553693 MIS18BP1Q6P0N0 1132 aa4.91□□□□□ -1.62
SCFD1-210ENST00000553693 TMEM171Q8WVE6 324 aa4.91□□□□□ -1.62
SCFD1-210ENST00000553693 SPSB4Q96A44 273 aa4.91□□□□□ -1.62
SCFD1-210ENST00000553693 C5orf34Q96MH7 638 aa4.91□□□□□ -1.62
SCFD1-210ENST00000553693 QTRT1Q9BXR0 403 aaKnown RBP4.91□□□□□ -1.62
SCFD1-210ENST00000553693 FAM204AQ9H8W3 233 aa4.91□□□□□ -1.62
SCFD1-210ENST00000553693 SMURF2Q9HAU4 748 aa4.91□□□□□ -1.62
SCFD1-210ENST00000553693 ATP6V0A4Q9HBG4 840 aa4.91□□□□□ -1.62
SCFD1-210ENST00000553693 XPNPEP3Q9NQH7 507 aa4.91□□□□□ -1.62
SCFD1-210ENST00000553693 C1orf112Q9NSG2 853 aa4.91□□□□□ -1.62
SCFD1-210ENST00000553693 ISM1B1AKI9 464 aa4.9□□□□□ -1.63
SCFD1-210ENST00000553693 AP4M1O00189 453 aa4.9□□□□□ -1.63
SCFD1-210ENST00000553693 CCP110O43303 1012 aa4.9□□□□□ -1.63
SCFD1-210ENST00000553693 VNN1O95497 513 aa4.9□□□□□ -1.63
SCFD1-210ENST00000553693 EPHA3P29320 983 aa4.9□□□□□ -1.63
SCFD1-210ENST00000553693 MMP13P45452 471 aa4.9□□□□□ -1.63
SCFD1-210ENST00000553693 LY6KQ17RY6 165 aa4.9□□□□□ -1.63
SCFD1-210ENST00000553693 MINDY4Q4G0A6 757 aa4.9□□□□□ -1.63
SCFD1-210ENST00000553693 C4orf46Q504U0 113 aa4.9□□□□□ -1.63
SCFD1-210ENST00000553693 TMEM63BQ5T3F8 832 aa4.9□□□□□ -1.63
SCFD1-210ENST00000553693 FAM102BQ5T8I3 360 aa4.9□□□□□ -1.63
SCFD1-210ENST00000553693 DPY19L3Q6ZPD9 716 aa4.9□□□□□ -1.63
SCFD1-210ENST00000553693 CNGA4Q8IV77 575 aa4.9□□□□□ -1.63
SCFD1-210ENST00000553693 FCRL4Q96PJ5 515 aa4.9□□□□□ -1.63
SCFD1-210ENST00000553693 PRR25Q96S07 402 aa4.9□□□□□ -1.63
SCFD1-210ENST00000553693 SH2D3AQ9BRG2 576 aa4.9□□□□□ -1.63
SCFD1-210ENST00000553693 PRSS22Q9GZN4 317 aa4.9□□□□□ -1.63
SCFD1-210ENST00000553693 GBA2Q9HCG7 927 aaPredicted RBP4.9□□□□□ -1.63
SCFD1-210ENST00000553693 SNX15Q9NRS6 342 aa4.9□□□□□ -1.63
SCFD1-210ENST00000553693 CDY1Q9Y6F8 540 aa4.9□□□□□ -1.63
SCFD1-210ENST00000553693 CYP2D7A0A087X1C5 515 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 LOC102723971A0A1B0GUV8 181 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 SMIM35A0A1B0GVV1 85 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 CFAP69A5D8W1 941 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 TRIM43BA6NCK2 446 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 KCNU1A8MYU2 1149 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 TMEM233B4DJY2 109 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 BTBD19C9JJ37 291 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 TBX3O15119 743 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 TP73O15350 636 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 SRGAP2O75044 1071 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 GCATO75600 419 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 BMP15O95972 392 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 MYBP10242 640 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 FPR3P25089 353 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 GKP32189 559 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 ARHGAP25P42331 645 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 PLCD1P51178 756 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 CACHD1Q5VU97 1274 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 SLC2A7Q6PXP3 512 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 KIAA0319LQ8IZA0 1049 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 Q8N9P0 234 aaPredicted RBP4.89□□□□□ -1.63
SCFD1-210ENST00000553693 DNAJB14Q8TBM8 379 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 TRIM43Q96BQ3 446 aaPredicted RBP4.89□□□□□ -1.63
SCFD1-210ENST00000553693 MMS19Q96T76 1030 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 FAM118BQ9BPY3 351 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 C22orf23Q9BZE7 217 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 TRIM36Q9NQ86 728 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 PDGFCQ9NRA1 345 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 TUBA8Q9NY65 449 aaPredicted RBP4.89□□□□□ -1.63
SCFD1-210ENST00000553693 AFF4Q9UHB7 1163 aaKnown RBP4.89□□□□□ -1.63
SCFD1-210ENST00000553693 USP22Q9UPT9 525 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 DRG1Q9Y295 367 aaKnown RBP4.89□□□□□ -1.63
SCFD1-210ENST00000553693 THRAP3Q9Y2W1 955 aaKnown RBP4.89□□□□□ -1.63
SCFD1-210ENST00000553693 WDR17Q8IZU2 1322 aa4.89□□□□□ -1.63
SCFD1-210ENST00000553693 TMEM232C9JQI7 657 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 CES2O00748 559 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 RGS10O43665 173 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 MOSPD3O75425 235 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 PMPCBO75439 489 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 RNF8O76064 485 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 RASAL1O95294 804 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 FGAP02671 866 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 S100BP04271 92 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-210ENST00000553693 CYP2A6P11509 494 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-210ENST00000553693 BRAFP15056 766 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 CACNB3P54284 484 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 ZNF268Q14587 947 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-210ENST00000553693 PPP2R5AQ15172 486 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 CNN3Q15417 329 aaKnown RBP4.88□□□□□ -1.63
SCFD1-210ENST00000553693 FAM187BQ17R55 369 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 RNASE12Q5GAN4 147 aaKnown RBP4.88□□□□□ -1.63
SCFD1-210ENST00000553693 PXDC1Q5TGL8 231 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 NXNQ6DKJ4 435 aa4.88□□□□□ -1.63
SCFD1-210ENST00000553693 BCDIN3DQ7Z5W3 292 aaKnown RBP4.88□□□□□ -1.63
SCFD1-210ENST00000553693 CHPFQ8IZ52 775 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms