RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 RAD51AP2Q09MP3 1159 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 TRIM29Q14134 588 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 DBX2Q6ZNG2 339 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 LURAP1LQ8IV03 231 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 SCN4BQ8IWT1 228 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 PHTF2Q8N3S3 785 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 SNX29Q8TEQ0 813 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 FCRL3Q96P31 734 aaPredicted RBP14.82□□□□□ -0.04
PRPF39-204ENST00000553605 DPP3Q9NY33 737 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 CPSF3Q9UKF6 684 aaKnown RBP14.82□□□□□ -0.04
PRPF39-204ENST00000553605 GOLGA4Q13439 2230 aaKnown RBP14.82□□□□□ -0.04
PRPF39-204ENST00000553605 ANAPC1Q9H1A4 1944 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 SCAMP3O14828 347 aaKnown RBP14.81□□□□□ -0.04
PRPF39-204ENST00000553605 FLRT2O43155 660 aa14.81□□□□□ -0.04
PRPF39-204ENST00000553605 CILPO75339 1184 aa14.81□□□□□ -0.04
PRPF39-204ENST00000553605 CER1O95813 267 aa14.81□□□□□ -0.04
PRPF39-204ENST00000553605 HLA-EP13747 358 aa14.81□□□□□ -0.04
PRPF39-204ENST00000553605 NDUFV2P19404 249 aa14.81□□□□□ -0.04
PRPF39-204ENST00000553605 CDC25AP30304 524 aa14.81□□□□□ -0.04
PRPF39-204ENST00000553605 NTSR1P30989 418 aa14.81□□□□□ -0.04
PRPF39-204ENST00000553605 EIF2S3P41091 472 aaKnown RBP14.81□□□□□ -0.04
PRPF39-204ENST00000553605 MATKP42679 507 aa14.81□□□□□ -0.04
PRPF39-204ENST00000553605 ORC2Q13416 577 aaPredicted RBP14.81□□□□□ -0.04
PRPF39-204ENST00000553605 PDIA5Q14554 519 aa14.81□□□□□ -0.04
PRPF39-204ENST00000553605 SMAD1Q15797 465 aaKnown RBP14.81□□□□□ -0.04
PRPF39-204ENST00000553605 ACBD6Q9BR61 282 aa14.81□□□□□ -0.04
PRPF39-204ENST00000553605 RNF38Q9H0F5 515 aa14.81□□□□□ -0.04
PRPF39-204ENST00000553605 GTF3C4Q9UKN8 822 aa14.81□□□□□ -0.04
PRPF39-204ENST00000553605 MYO18AQ92614 2054 aaKnown RBP14.81□□□□□ -0.04
PRPF39-204ENST00000553605 H0YCG3 227 aa14.8□□□□□ -0.04
PRPF39-204ENST00000553605 HNRNPDLO14979 420 aaKnown RBP14.8□□□□□ -0.04
PRPF39-204ENST00000553605 ARHGAP6O43182 974 aa14.8□□□□□ -0.04
PRPF39-204ENST00000553605 SLC7A9P82251 487 aa14.8□□□□□ -0.04
PRPF39-204ENST00000553605 HLA-BQ31612 363 aa14.8□□□□□ -0.04
PRPF39-204ENST00000553605 SV2CQ496J9 727 aa14.8□□□□□ -0.04
PRPF39-204ENST00000553605 PREPLQ4J6C6 727 aaPredicted RBP14.8□□□□□ -0.04
PRPF39-204ENST00000553605 INTS6LQ5JSJ4 861 aaKnown RBP14.8□□□□□ -0.04
PRPF39-204ENST00000553605 SDE2Q6IQ49 451 aa14.8□□□□□ -0.04
PRPF39-204ENST00000553605 IL27RAQ6UWB1 636 aa14.8□□□□□ -0.04
PRPF39-204ENST00000553605 NUDT18Q6ZVK8 323 aa14.8□□□□□ -0.04
PRPF39-204ENST00000553605 SPATA2LQ8IUW3 424 aaPredicted RBP14.8□□□□□ -0.04
PRPF39-204ENST00000553605 NAT16Q8N8M0 369 aa14.8□□□□□ -0.04
PRPF39-204ENST00000553605 IPO4Q8TEX9 1081 aaKnown RBP14.8□□□□□ -0.04
PRPF39-204ENST00000553605 DNASE2BQ8WZ79 361 aa14.8□□□□□ -0.04
PRPF39-204ENST00000553605 MSTO1Q9BUK6 570 aa14.8□□□□□ -0.04
PRPF39-204ENST00000553605 ASB7Q9H672 318 aa14.8□□□□□ -0.04
PRPF39-204ENST00000553605 CLMPQ9H6B4 373 aa14.8□□□□□ -0.04
PRPF39-204ENST00000553605 CD93Q9NPY3 652 aa14.8□□□□□ -0.04
PRPF39-204ENST00000553605 SMPD4Q9NXE4 827 aa14.8□□□□□ -0.04
PRPF39-204ENST00000553605 DDX43Q9NXZ2 648 aaKnown RBP14.8□□□□□ -0.04
PRPF39-204ENST00000553605 TRPM5Q9NZQ8 1165 aa14.8□□□□□ -0.04
PRPF39-204ENST00000553605 FNDC3AQ9Y2H6 1198 aaKnown RBP14.8□□□□□ -0.04
PRPF39-204ENST00000553605 C2CD2Q9Y426 696 aa14.8□□□□□ -0.04
PRPF39-204ENST00000553605 PCDHGB2Q9Y5G2 931 aa14.8□□□□□ -0.04
PRPF39-204ENST00000553605 CPQQ9Y646 472 aa14.8□□□□□ -0.04
PRPF39-204ENST00000553605 MYO18BQ8IUG5 2567 aa14.8□□□□□ -0.04
PRPF39-204ENST00000553605 A0A0B4J269 797 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 TEX51A0A1B0GUA7 166 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 PLK4O00444 970 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 RRP8O43159 456 aaKnown RBP14.79□□□□□ -0.04
PRPF39-204ENST00000553605 ACAT1P24752 427 aaKnown RBP14.79□□□□□ -0.04
PRPF39-204ENST00000553605 GAD2Q05329 585 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 TCHHQ07283 1943 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 CFAP221Q4G0U5 840 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 CCDC157Q569K6 752 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 LY6G5CQ5SRR4 150 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 C10orf76Q5T2E6 689 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 BTBD8Q5XKL5 378 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 GPR155Q7Z3F1 870 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 KCNK18Q7Z418 384 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 MIB1Q86YT6 1006 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 PDCL2Q8N4E4 241 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 ZCCHC9Q8N567 271 aaKnown RBP14.79□□□□□ -0.04
PRPF39-204ENST00000553605 ERLEC1Q96DZ1 483 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 PKMYT1Q99640 499 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 MIR1-1HGQ9H1L0 117 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 CD248Q9HCU0 757 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 CFAP97Q9P2B7 532 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 DEC1Q9P2X7 70 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 HCN2Q9UL51 889 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.79□□□□□ -0.04
PRPF39-204ENST00000553605 STARD13Q9Y3M8 1113 aa14.79□□□□□ -0.04
PRPF39-204ENST00000553605 MYOFQ9NZM1 2061 aa14.78□□□□□ -0.04
PRPF39-204ENST00000553605 MEI4A8MW99 385 aa14.78□□□□□ -0.04
PRPF39-204ENST00000553605 TNFSF14O43557 240 aa14.78□□□□□ -0.04
PRPF39-204ENST00000553605 TULP3O75386 442 aa14.78□□□□□ -0.04
PRPF39-204ENST00000553605 ACOT2P49753 483 aa14.78□□□□□ -0.04
PRPF39-204ENST00000553605 NCKAP1LP55160 1127 aa14.78□□□□□ -0.04
PRPF39-204ENST00000553605 IRX6P78412 446 aaPredicted RBP14.78□□□□□ -0.04
PRPF39-204ENST00000553605 MYL7Q01449 175 aa14.78□□□□□ -0.04
PRPF39-204ENST00000553605 SUZ12Q15022 739 aaKnown RBP14.78□□□□□ -0.04
PRPF39-204ENST00000553605 KRT79Q5XKE5 535 aa14.78□□□□□ -0.04
PRPF39-204ENST00000553605 ETFBKMTQ8IXQ9 262 aa14.78□□□□□ -0.04
PRPF39-204ENST00000553605 CHPFQ8IZ52 775 aa14.78□□□□□ -0.04
PRPF39-204ENST00000553605 C4orf32Q8N8J7 132 aa14.78□□□□□ -0.04
PRPF39-204ENST00000553605 IGSF22Q8N9C0 903 aa14.78□□□□□ -0.04
PRPF39-204ENST00000553605 NXPE2Q96DL1 559 aa14.78□□□□□ -0.04
PRPF39-204ENST00000553605 FUBP3Q96I24 572 aaKnown RBP eCLIP14.78□□□□□ -0.04
PRPF39-204ENST00000553605 RAB34Q9BZG1 259 aa14.78□□□□□ -0.04
PRPF39-204ENST00000553605 SLC6A17Q9H1V8 727 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms