RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 C3orf58Q8NDZ4 430 aa19.65■□□□□ 0.74
LRP1-204ENST00000553277 CPA5Q8WXQ8 436 aa19.65■□□□□ 0.74
LRP1-204ENST00000553277 TOP1MTQ969P6 601 aa19.65■□□□□ 0.74
LRP1-204ENST00000553277 CYFIP2Q96F07 1278 aa19.65■□□□□ 0.74
LRP1-204ENST00000553277 ROPN1BQ9BZX4 212 aaPredicted RBP19.65■□□□□ 0.74
LRP1-204ENST00000553277 ZNF518BQ9C0D4 1074 aa19.65■□□□□ 0.74
LRP1-204ENST00000553277 RASSF4Q9H2L5 321 aa19.65■□□□□ 0.74
LRP1-204ENST00000553277 ROPN1Q9HAT0 212 aaPredicted RBP19.65■□□□□ 0.74
LRP1-204ENST00000553277 ADAM22Q9P0K1 906 aa19.65■□□□□ 0.74
LRP1-204ENST00000553277 LRFN2Q9ULH4 789 aa19.65■□□□□ 0.74
LRP1-204ENST00000553277 NOVA2Q9UNW9 492 aaKnown RBP19.65■□□□□ 0.74
LRP1-204ENST00000553277 B4GALT3O60512 393 aa19.64■□□□□ 0.73
LRP1-204ENST00000553277 DDHD2O94830 711 aa19.64■□□□□ 0.73
LRP1-204ENST00000553277 RAD23BP54727 409 aa19.64■□□□□ 0.73
LRP1-204ENST00000553277 MAMLD1Q13495 774 aa19.64■□□□□ 0.73
LRP1-204ENST00000553277 SCARA5Q6ZMJ2 495 aa19.64■□□□□ 0.73
LRP1-204ENST00000553277 C16orf59Q7L2K0 433 aa19.64■□□□□ 0.73
LRP1-204ENST00000553277 UNC93AQ86WB7 457 aa19.64■□□□□ 0.73
LRP1-204ENST00000553277 ZNF280BQ86YH2 543 aa19.64■□□□□ 0.73
LRP1-204ENST00000553277 EXD1Q8NHP7 514 aa19.64■□□□□ 0.73
LRP1-204ENST00000553277 SPATA18Q8TC71 538 aa19.64■□□□□ 0.73
LRP1-204ENST00000553277 RNF25Q96BH1 459 aaPredicted RBP19.64■□□□□ 0.73
LRP1-204ENST00000553277 PAAF1Q9BRP4 392 aa19.64■□□□□ 0.73
LRP1-204ENST00000553277 MRPL9Q9BYD2 267 aaKnown RBP19.64■□□□□ 0.73
LRP1-204ENST00000553277 CENPHQ9H3R5 247 aa19.64■□□□□ 0.73
LRP1-204ENST00000553277 PARVAQ9NVD7 372 aa19.64■□□□□ 0.73
LRP1-204ENST00000553277 A0A087WUV0 522 aaPredicted RBP19.63■□□□□ 0.73
LRP1-204ENST00000553277 CASTOR2A6NHX0 329 aa19.63■□□□□ 0.73
LRP1-204ENST00000553277 TRAPPC3O43617 180 aa19.63■□□□□ 0.73
LRP1-204ENST00000553277 DGKIO75912 1065 aa19.63■□□□□ 0.73
LRP1-204ENST00000553277 GAS8O95995 478 aa19.63■□□□□ 0.73
LRP1-204ENST00000553277 AGTP01019 485 aa19.63■□□□□ 0.73
LRP1-204ENST00000553277 CD58P19256 250 aa19.63■□□□□ 0.73
LRP1-204ENST00000553277 IGFBP6P24592 240 aaPredicted RBP19.63■□□□□ 0.73
LRP1-204ENST00000553277 PPIGQ13427 754 aaKnown RBP eCLIP19.63■□□□□ 0.734e-10■□□□□ 11.2
LRP1-204ENST00000553277 ODF2Q5BJF6 829 aa19.63■□□□□ 0.73
LRP1-204ENST00000553277 LRRC38Q5VT99 294 aa19.63■□□□□ 0.73
LRP1-204ENST00000553277 CPNE8Q86YQ8 564 aa19.63■□□□□ 0.73
LRP1-204ENST00000553277 ABI1Q8IZP0 508 aa19.63■□□□□ 0.73
LRP1-204ENST00000553277 BBOF1Q8ND07 529 aa19.63■□□□□ 0.73
LRP1-204ENST00000553277 ATL2Q8NHH9 583 aa19.63■□□□□ 0.73
LRP1-204ENST00000553277 MYCBPAPQ8TBZ2 947 aa19.63■□□□□ 0.73
LRP1-204ENST00000553277 KBTBD7Q8WVZ9 684 aa19.63■□□□□ 0.73
LRP1-204ENST00000553277 CCT8L2Q96SF2 557 aa19.63■□□□□ 0.73
LRP1-204ENST00000553277 PRKAG2Q9UGJ0 569 aa19.63■□□□□ 0.73
LRP1-204ENST00000553277 KIAA1257Q9ULG3 409 aa19.63■□□□□ 0.73
LRP1-204ENST00000553277 COL4A6Q14031 1691 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 GMNCA6NCL1 334 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 M0QZQ0 153 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 GABRDO14764 452 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 HPDP32754 393 aaPredicted RBP19.62■□□□□ 0.73
LRP1-204ENST00000553277 RAP1GAPP47736 663 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 MAGOHP61326 146 aaKnown RBP19.62■□□□□ 0.73
LRP1-204ENST00000553277 TAP1Q03518 808 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 KLF1Q13351 362 aaPredicted RBP19.62■□□□□ 0.73
LRP1-204ENST00000553277 PPP1R7Q15435 360 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 CCNG2Q16589 344 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 TNFAIP8L3Q5GJ75 292 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 TTC19Q6DKK2 380 aaPredicted RBP19.62■□□□□ 0.73
LRP1-204ENST00000553277 RHBDF2Q6PJF5 856 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 SLC4A11Q8NBS3 891 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 ZNF606Q8WXB4 792 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 HTATIP2Q9BUP3 242 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 DCLK3Q9C098 648 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 RC3H2Q9HBD1 1191 aaKnown RBP19.62■□□□□ 0.73
LRP1-204ENST00000553277 CACNG4Q9UBN1 327 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 IP6K2Q9UHH9 426 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 FAM169AQ9Y6X4 670 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 B3GAT3O94766 335 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 CALB1P05937 261 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 MMP8P22894 467 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 WARSP23381 471 aaKnown RBP19.62■□□□□ 0.73
LRP1-204ENST00000553277 CETN2P41208 172 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 WDR5P61964 334 aaKnown RBP19.62■□□□□ 0.73
LRP1-204ENST00000553277 CEP128Q6ZU80 1094 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 TMEM86AQ8N2M4 240 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 APPL2Q8NEU8 664 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 FEZF2Q8TBJ5 459 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 ZNF473Q8WTR7 871 aaKnown RBP19.62■□□□□ 0.73
LRP1-204ENST00000553277 PPM1EQ8WY54 764 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 ZNF689Q96CS4 500 aaPredicted RBP19.62■□□□□ 0.73
LRP1-204ENST00000553277 SNF8Q96H20 258 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 TMEM176AQ96HP8 235 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 SENP8Q96LD8 212 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 TWNKQ96RR1 684 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 MRPL45Q9BRJ2 306 aaKnown RBP19.62■□□□□ 0.73
LRP1-204ENST00000553277 FOXP3Q9BZS1 431 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 ELOVL4Q9GZR5 314 aa19.62■□□□□ 0.73
LRP1-204ENST00000553277 RIPK2O43353 540 aa19.61■□□□□ 0.73
LRP1-204ENST00000553277 HUS1O60921 280 aa19.61■□□□□ 0.73
LRP1-204ENST00000553277 CPP00450 1065 aa19.61■□□□□ 0.73
LRP1-204ENST00000553277 CYP11A1P05108 521 aa19.61■□□□□ 0.73
LRP1-204ENST00000553277 CDH5P33151 784 aaPredicted RBP19.61■□□□□ 0.73
LRP1-204ENST00000553277 NDST1P52848 882 aa19.61■□□□□ 0.73
LRP1-204ENST00000553277 SLC29A2Q14542 456 aa19.61■□□□□ 0.73
LRP1-204ENST00000553277 TIGD5Q53EQ6 642 aa19.61■□□□□ 0.73
LRP1-204ENST00000553277 CRYBG2Q8N1P7 616 aa19.61■□□□□ 0.73
LRP1-204ENST00000553277 SUSD3Q96L08 255 aa19.61■□□□□ 0.73
LRP1-204ENST00000553277 NT5C1AQ9BXI3 368 aa19.61■□□□□ 0.73
LRP1-204ENST00000553277 NRDE2Q9H7Z3 1164 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms