RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 AXIN1O15169 862 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 VNN1O95497 513 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 TPM1P09493 284 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 TBXAS1P24557 533 aaPredicted RBP12.11□□□□□ -0.47
TMEM116-218ENST00000552839 KPNA1P52294 538 aaPredicted RBP12.11□□□□□ -0.47
TMEM116-218ENST00000552839 LIMK1P53667 647 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 LILRA4P59901 499 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 SHC2P98077 582 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 LRRC32Q14392 662 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 CCDC6Q16204 474 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 AASDHQ4L235 1098 aaPredicted RBP12.11□□□□□ -0.47
TMEM116-218ENST00000552839 CTXN3Q4LDR2 81 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 C1orf220Q5T0J3 134 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 ZNF280DQ6N043 979 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 TXNDC11Q6PKC3 985 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 GPIHBP1Q8IV16 184 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 ADGRF2Q8IZF7 708 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 THEM5Q8N1Q8 247 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 TMEM130Q8N3G9 435 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 NEK11Q8NG66 645 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 SHKBP1Q8TBC3 707 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 CSGALNACT1Q8TDX6 532 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 SENP8Q96LD8 212 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 FAM81BQ96LP2 452 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 RBSNQ9H1K0 784 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 ARRDC1-AS1Q9H2J1 176 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 C8orf33Q9H7E9 229 aaPredicted RBP12.11□□□□□ -0.47
TMEM116-218ENST00000552839 ASAH2Q9NR71 780 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 IFNKQ9P0W0 207 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 AFF4Q9UHB7 1163 aaKnown RBP12.11□□□□□ -0.47
TMEM116-218ENST00000552839 PCDHB8Q9UN66 801 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 MYBPHLA2RUH7 354 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 CHADO15335 359 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 ASS1P00966 412 aaKnown RBP12.1□□□□□ -0.47
TMEM116-218ENST00000552839 ZNF806P0C7X5 589 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 CD58P19256 250 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 HOXA6P31267 233 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 CTHP32929 405 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 TSPY1Q01534 308 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 YWHAHQ04917 246 aaPredicted RBP12.1□□□□□ -0.47
TMEM116-218ENST00000552839 FCHO2Q0JRZ9 810 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 RAPGEF1Q13905 1077 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 MIIPQ5JXC2 388 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 DGKKQ5KSL6 1271 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 OVOS1Q6IE37 1185 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 SPOPLQ6IQ16 392 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 C1orf228Q6PIY5 440 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 RNF19BQ6ZMZ0 732 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 CACNA2D4Q7Z3S7 1137 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 WDR5BQ86VZ2 330 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 YAF2Q8IY57 180 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 TMEM86AQ8N2M4 240 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 TTC39CQ8N584 583 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 TOP6BLQ8N6T0 577 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 C12orf50Q8NA57 414 aaPredicted RBP12.1□□□□□ -0.47
TMEM116-218ENST00000552839 LEMD2Q8NC56 503 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 EHBP1Q8NDI1 1231 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 OR6B3Q8NGW1 331 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 ANP32BQ92688 251 aaKnown RBP12.1□□□□□ -0.47
TMEM116-218ENST00000552839 E2F7Q96AV8 911 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 MSANTD3Q96H12 275 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 SUSD3Q96L08 255 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 LRRC3Q9BY71 257 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 GPR88Q9GZN0 384 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 SLITRK6Q9H5Y7 841 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 CHD8Q9HCK8 2581 aa12.1□□□□□ -0.47
TMEM116-218ENST00000552839 A0A1W2PRU2 124 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 GOLGA6L6A8MZA4 724 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 SPECC1L-ADORA2AF8WAN1 911 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 PMM2O15305 246 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 STAU1O95793 577 aaKnown RBP12.09□□□□□ -0.47
TMEM116-218ENST00000552839 CST3P01034 146 aaPredicted RBP12.09□□□□□ -0.47
TMEM116-218ENST00000552839 KRT5P13647 590 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 CPB1P15086 417 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 TYMPP19971 482 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 PCSK1P29120 753 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 USP8P40818 1118 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 MFAP3P55082 362 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 PON2Q15165 354 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 SYCP1Q15431 976 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 STXBP5Q5T5C0 1151 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 TRIM65Q6PJ69 517 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 RALGPS2Q86X27 583 aaPredicted RBP12.09□□□□□ -0.47
TMEM116-218ENST00000552839 TMC8Q8IU68 726 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 DRC7Q8IY82 874 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 TTC8Q8TAM2 541 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 LRRC3BQ96PB8 259 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 SPAG5Q96R06 1193 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 SMYD3Q9H7B4 428 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 FAM207AQ9NSI2 230 aaPredicted RBP12.09□□□□□ -0.47
TMEM116-218ENST00000552839 GTSE1Q9NYZ3 720 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 MAFFQ9ULX9 164 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 YIPF1Q9Y548 306 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 TIMM13Q9Y5L4 95 aaPredicted RBP12.09□□□□□ -0.47
TMEM116-218ENST00000552839 SCN1AP35498 2009 aa12.09□□□□□ -0.47
TMEM116-218ENST00000552839 A0A1B0GTH6 734 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 A8MXQ7 604 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 M0QZQ0 153 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 VNN2O95498 520 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 RAP1GAPP47736 663 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms