RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 UTP11Q9Y3A2 253 aaKnown RBP20.67■□□□□ 0.9
SSH1-209ENST00000551165 SCN5AQ14524 2016 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 ENPP3O14638 875 aa20.66■□□□□ 0.9
SSH1-209ENST00000551165 INPPL1O15357 1258 aa20.66■□□□□ 0.9
SSH1-209ENST00000551165 TRUB2O95900 331 aaKnown RBP20.66■□□□□ 0.9
SSH1-209ENST00000551165 FAM163BP0C2L3 166 aa20.66■□□□□ 0.9
SSH1-209ENST00000551165 NPR3P17342 541 aa20.66■□□□□ 0.9
SSH1-209ENST00000551165 ADIGQ0VDE8 80 aa20.66■□□□□ 0.9
SSH1-209ENST00000551165 PPP2R5EQ16537 467 aa20.66■□□□□ 0.9
SSH1-209ENST00000551165 HSPH1Q92598 858 aa20.66■□□□□ 0.9
SSH1-209ENST00000551165 RBM41Q96IZ5 413 aaKnown RBP20.66■□□□□ 0.9
SSH1-209ENST00000551165 KRT82Q9NSB4 513 aa20.66■□□□□ 0.9
SSH1-209ENST00000551165 TSC2P49815 1807 aa20.66■□□□□ 0.9
SSH1-209ENST00000551165 XPO1O14980 1071 aaKnown RBP20.66■□□□□ 0.9
SSH1-209ENST00000551165 RNF8O76064 485 aa20.66■□□□□ 0.9
SSH1-209ENST00000551165 ATXN1P54253 815 aaKnown RBP20.66■□□□□ 0.9
SSH1-209ENST00000551165 PLEKHG4Q58EX7 1191 aa20.66■□□□□ 0.9
SSH1-209ENST00000551165 NOMO2Q5JPE7 1267 aa20.66■□□□□ 0.9
SSH1-209ENST00000551165 POLNQ7Z5Q5 900 aa20.66■□□□□ 0.9
SSH1-209ENST00000551165 CTU1Q7Z7A3 348 aaKnown RBP20.66■□□□□ 0.9
SSH1-209ENST00000551165 HAUS1Q96CS2 278 aa20.66■□□□□ 0.9
SSH1-209ENST00000551165 TBC1D13Q9NVG8 400 aa20.66■□□□□ 0.9
SSH1-209ENST00000551165 TMLHEQ9NVH6 421 aa20.66■□□□□ 0.9
SSH1-209ENST00000551165 ASNSD1Q9NWL6 643 aa20.66■□□□□ 0.9
SSH1-209ENST00000551165 HCSTQ9UBK5 93 aa20.66■□□□□ 0.9
SSH1-209ENST00000551165 hCG_1818297A0A087WSY0 165 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 H3BQF6 201 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 CCL23P55773 120 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 BFSP2Q13515 415 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 EMBQ6PCB8 327 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 ZMIZ2Q8NF64 920 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 OR10T2Q8NGX3 314 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 CAVIN3Q969G5 261 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 SMOQ99835 787 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 WBP1LQ9NX94 342 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 FAM187AA6NFU0 413 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 M0QZQ0 153 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 ODC1P11926 461 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 DSC1Q08554 894 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 ADCY1Q08828 1119 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 GPRIN1Q7Z2K8 1008 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 PRUNE1Q86TP1 453 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 FAM35AQ86V20 835 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 LRRTM3Q86VH5 581 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 FAM172AQ8WUF8 416 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 NGRNQ9NPE2 291 aaKnown RBP20.65■□□□□ 0.9
SSH1-209ENST00000551165 DDX56Q9NY93 547 aaKnown RBP20.65■□□□□ 0.9
SSH1-209ENST00000551165 CALCOCO1Q9P1Z2 691 aa20.65■□□□□ 0.9
SSH1-209ENST00000551165 SAE1Q9UBE0 346 aaPredicted RBP20.65■□□□□ 0.9
SSH1-209ENST00000551165 KDELR1P24390 212 aa20.64■□□□□ 0.89
SSH1-209ENST00000551165 RPL21P46778 160 aaKnown RBP20.64■□□□□ 0.89
SSH1-209ENST00000551165 FNTAP49354 379 aa20.64■□□□□ 0.89
SSH1-209ENST00000551165 PLCB3Q01970 1234 aa20.64■□□□□ 0.89
SSH1-209ENST00000551165 CUL1Q13616 776 aa20.64■□□□□ 0.89
SSH1-209ENST00000551165 HADHQ16836 314 aaKnown RBP20.64■□□□□ 0.89
SSH1-209ENST00000551165 TFDP3Q5H9I0 405 aa20.64■□□□□ 0.89
SSH1-209ENST00000551165 DCLRE1AQ6PJP8 1040 aa20.64■□□□□ 0.89
SSH1-209ENST00000551165 KRT222Q8N1A0 295 aa20.64■□□□□ 0.89
SSH1-209ENST00000551165 MYCBPAPQ8TBZ2 947 aa20.64■□□□□ 0.89
SSH1-209ENST00000551165 DIS3LQ8TF46 1054 aaKnown RBP20.64■□□□□ 0.89
SSH1-209ENST00000551165 HSFY1Q96LI6 401 aa20.64■□□□□ 0.89
SSH1-209ENST00000551165 PPP1R12CQ9BZL4 782 aa20.64■□□□□ 0.89
SSH1-209ENST00000551165 UBXN6Q9BZV1 441 aa20.64■□□□□ 0.89
SSH1-209ENST00000551165 CDH9Q9ULB4 789 aa20.64■□□□□ 0.89
SSH1-209ENST00000551165 PRG3Q9Y2Y8 225 aaPredicted RBP20.64■□□□□ 0.89
SSH1-209ENST00000551165 KRT7P08729 469 aa20.64■□□□□ 0.89
SSH1-209ENST00000551165 DYNLT1P63172 113 aa20.64■□□□□ 0.89
SSH1-209ENST00000551165 TRIP13Q15645 432 aaPredicted RBP20.64■□□□□ 0.89
SSH1-209ENST00000551165 ODF2Q5BJF6 829 aa20.64■□□□□ 0.89
SSH1-209ENST00000551165 SCYL2Q6P3W7 929 aa20.64■□□□□ 0.89
SSH1-209ENST00000551165 SLC26A9Q7LBE3 791 aa20.64■□□□□ 0.89
SSH1-209ENST00000551165 COLGALT2Q8IYK4 626 aa20.64■□□□□ 0.89
SSH1-209ENST00000551165 MAGEB5Q9BZ81 275 aa20.64■□□□□ 0.89
SSH1-209ENST00000551165 GPATCH2LQ9NWQ4 482 aa20.64■□□□□ 0.89
SSH1-209ENST00000551165 DPYSL4O14531 572 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 AP1G2O75843 785 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 FAM200BP0CF97 657 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 PCK1P35558 622 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 OR1G1P47890 313 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 HDAC4P56524 1084 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 MMRN1Q13201 1228 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 ACAP1Q15027 740 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 ZDHHC17Q8IUH5 632 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 FTHL17Q9BXU8 183 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 RAB17Q9H0T7 212 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 GRHL1Q9NZI5 618 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 CYP11A1P05108 521 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 SDC4P31431 198 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 BCAR1P56945 870 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 PITX1P78337 314 aaPredicted RBP20.63■□□□□ 0.89
SSH1-209ENST00000551165 FAAP100Q0VG06 881 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 ZDHHC24Q6UX98 284 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 SLC39A5Q6ZMH5 540 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 CMASQ8NFW8 434 aaPredicted RBP20.63■□□□□ 0.89
SSH1-209ENST00000551165 RIN2Q8WYP3 895 aaPredicted RBP20.63■□□□□ 0.89
SSH1-209ENST00000551165 MYLPFQ96A32 169 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 SUSD3Q96L08 255 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 UROC1Q96N76 676 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 TMEM161AQ9NX61 479 aa20.63■□□□□ 0.89
SSH1-209ENST00000551165 ECEL1O95672 775 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms