RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 ADAM9Q13443 819 aa13.85□□□□□ -0.19
NPAS3-209ENST00000551008 RUNX3Q13761 415 aa13.85□□□□□ -0.19
NPAS3-209ENST00000551008 SGSM1Q2NKQ1 1148 aa13.85□□□□□ -0.19
NPAS3-209ENST00000551008 GAB4Q2WGN9 574 aa13.85□□□□□ -0.19
NPAS3-209ENST00000551008 ITPRIPL2Q3MIP1 535 aa13.85□□□□□ -0.19
NPAS3-209ENST00000551008 FSTL4Q6MZW2 842 aa13.85□□□□□ -0.19
NPAS3-209ENST00000551008 INTS8Q75QN2 995 aaKnown RBP13.85□□□□□ -0.19
NPAS3-209ENST00000551008 CRYBG2Q8N1P7 616 aa13.85□□□□□ -0.19
NPAS3-209ENST00000551008 C12orf29Q8N999 325 aa13.85□□□□□ -0.19
NPAS3-209ENST00000551008 SCAMP5Q8TAC9 235 aa13.85□□□□□ -0.19
NPAS3-209ENST00000551008 TAF4BQ92750 862 aa13.85□□□□□ -0.19
NPAS3-209ENST00000551008 SMOQ99835 787 aa13.85□□□□□ -0.19
NPAS3-209ENST00000551008 ARHGAP26Q9UNA1 814 aa13.85□□□□□ -0.19
NPAS3-209ENST00000551008 WNT6Q9Y6F9 365 aa13.85□□□□□ -0.19
NPAS3-209ENST00000551008 MYO18AQ92614 2054 aaKnown RBP13.85□□□□□ -0.19
NPAS3-209ENST00000551008 FAM92AA1XBS5 289 aa13.84□□□□□ -0.19
NPAS3-209ENST00000551008 HHLA1C9JL84 531 aa13.84□□□□□ -0.19
NPAS3-209ENST00000551008 K7ESF4 209 aa13.84□□□□□ -0.19
NPAS3-209ENST00000551008 KIF20AO95235 890 aa13.84□□□□□ -0.19
NPAS3-209ENST00000551008 CKMP06732 381 aa13.84□□□□□ -0.19
NPAS3-209ENST00000551008 USP17L7P0C7H9 530 aa13.84□□□□□ -0.19
NPAS3-209ENST00000551008 DMWDQ09019 674 aa13.84□□□□□ -0.19
NPAS3-209ENST00000551008 EML3Q32P44 896 aa13.84□□□□□ -0.19
NPAS3-209ENST00000551008 TMEM196Q5HYL7 178 aa13.84□□□□□ -0.19
NPAS3-209ENST00000551008 ZNF658Q5TYW1 1059 aaPredicted RBP13.84□□□□□ -0.19
NPAS3-209ENST00000551008 ANKRD40Q6AI12 368 aa13.84□□□□□ -0.19
NPAS3-209ENST00000551008 GPRIN1Q7Z2K8 1008 aa13.84□□□□□ -0.19
NPAS3-209ENST00000551008 ADSSL1Q8N142 457 aa13.84□□□□□ -0.19
NPAS3-209ENST00000551008 SH3RF2Q8TEC5 729 aa13.84□□□□□ -0.19
NPAS3-209ENST00000551008 ZFRQ96KR1 1074 aaKnown RBP13.84□□□□□ -0.19
NPAS3-209ENST00000551008 TIGD1Q96MW7 591 aa13.84□□□□□ -0.19
NPAS3-209ENST00000551008 GSDMAQ96QA5 445 aa13.84□□□□□ -0.19
NPAS3-209ENST00000551008 MMRN2Q9H8L6 949 aa13.84□□□□□ -0.19
NPAS3-209ENST00000551008 TMEM8AQ9HCN3 771 aa13.84□□□□□ -0.19
NPAS3-209ENST00000551008 CSNK1G1Q9HCP0 422 aa13.84□□□□□ -0.19
NPAS3-209ENST00000551008 KRT82Q9NSB4 513 aa13.84□□□□□ -0.19
NPAS3-209ENST00000551008 FAM49BQ9NUQ9 324 aa13.84□□□□□ -0.19
NPAS3-209ENST00000551008 ANTXRLA6NF34 631 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 CILPO75339 1184 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 ZDHHC11BP0C7U3 371 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 HDCP19113 662 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 ANXA13P27216 316 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 SLC5A3P53794 718 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 SLC7A9P82251 487 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 CBWD6Q4V339 395 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 CBWD3Q5JTY5 395 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 CBWD5Q5RIA9 395 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 UNC93AQ86WB7 457 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 NUP93Q8N1F7 819 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 SLC2A14Q8TDB8 520 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 OSCP1Q8WVF1 389 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 WBP2Q969T9 261 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 SMARCD1Q96GM5 515 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 TNIP3Q96KP6 325 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 ARID3AQ99856 593 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 IER2Q9BTL4 223 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 NIF3L1Q9GZT8 377 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 LINC00597Q9H2U6 94 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 ECT2Q9H8V3 914 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 DMAP1Q9NPF5 467 aaPredicted RBP13.83□□□□□ -0.2
NPAS3-209ENST00000551008 THG1LQ9NWX6 298 aaKnown RBP13.83□□□□□ -0.2
NPAS3-209ENST00000551008 TRPM5Q9NZQ8 1165 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 MAN1B1Q9UKM7 699 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 SDK1Q7Z5N4 2213 aa13.83□□□□□ -0.2
NPAS3-209ENST00000551008 RALGAPA1Q6GYQ0 2036 aa13.82□□□□□ -0.2
NPAS3-209ENST00000551008 LEFTY2O00292 366 aa13.82□□□□□ -0.2
NPAS3-209ENST00000551008 TRDMT1O14717 391 aaKnown RBP13.82□□□□□ -0.2
NPAS3-209ENST00000551008 SCAMP3O14828 347 aaKnown RBP13.82□□□□□ -0.2
NPAS3-209ENST00000551008 AP1G2O75843 785 aa13.82□□□□□ -0.2
NPAS3-209ENST00000551008 PAPSS2O95340 614 aaPredicted RBP13.82□□□□□ -0.2
NPAS3-209ENST00000551008 LMNAP02545 664 aaKnown RBP13.82□□□□□ -0.2
NPAS3-209ENST00000551008 CHRM1P11229 460 aaPredicted RBP13.82□□□□□ -0.2
NPAS3-209ENST00000551008 PFKLP17858 780 aa13.82□□□□□ -0.2
NPAS3-209ENST00000551008 RPL13P26373 211 aaKnown RBP13.82□□□□□ -0.2
NPAS3-209ENST00000551008 GTF2H1P32780 548 aa13.82□□□□□ -0.2
NPAS3-209ENST00000551008 GJA4P35212 333 aa13.82□□□□□ -0.2
NPAS3-209ENST00000551008 IFRD2Q12894 506 aaPredicted RBP13.82□□□□□ -0.2
NPAS3-209ENST00000551008 PDGFRLQ15198 375 aa13.82□□□□□ -0.2
NPAS3-209ENST00000551008 C1orf228Q6PIY5 440 aa13.82□□□□□ -0.2
NPAS3-209ENST00000551008 SPEM1Q8N4L4 309 aa13.82□□□□□ -0.2
NPAS3-209ENST00000551008 DUSP9Q99956 384 aaKnown RBP13.82□□□□□ -0.2
NPAS3-209ENST00000551008 SEMA4AQ9H3S1 761 aa13.82□□□□□ -0.2
NPAS3-209ENST00000551008 POLR3BQ9NW08 1133 aaPredicted RBP13.82□□□□□ -0.2
NPAS3-209ENST00000551008 ZSCAN32Q9NX65 697 aa13.82□□□□□ -0.2
NPAS3-209ENST00000551008 GMIPQ9P107 970 aa13.82□□□□□ -0.2
NPAS3-209ENST00000551008 PCDHGA2Q9Y5H1 932 aa13.82□□□□□ -0.2
NPAS3-209ENST00000551008 COCHO43405 550 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 EGFP01133 1207 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 KRT13P13646 458 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 P4HA1P13674 534 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 YWHAQP27348 245 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 MXI1P50539 228 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 CCR3P51677 355 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 MESP2Q0VG99 397 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 LRRC32Q14392 662 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 DGKKQ5KSL6 1271 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 SNX30Q5VWJ9 437 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 KRT39Q6A163 491 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 ISM2Q6H9L7 571 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 CLEC20AQ6ZU45 233 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms