RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 TRPM5Q9NZQ8 1165 aa13.43□□□□□ -0.26
LETMD1-222ENST00000550274 MMP17Q9ULZ9 603 aa13.43□□□□□ -0.26
LETMD1-222ENST00000550274 R3HCC1Q9Y3T6 440 aaKnown RBP13.43□□□□□ -0.26
LETMD1-222ENST00000550274 CPQQ9Y646 472 aa13.43□□□□□ -0.26
LETMD1-222ENST00000550274 PKD1L2Q7Z442 2459 aa13.42□□□□□ -0.26
LETMD1-222ENST00000550274 TRIM66O15016 1216 aa13.42□□□□□ -0.26
LETMD1-222ENST00000550274 KIAA0391O15091 583 aaKnown RBP13.42□□□□□ -0.26
LETMD1-222ENST00000550274 CST3P01034 146 aaPredicted RBP13.42□□□□□ -0.26
LETMD1-222ENST00000550274 PFKLP17858 780 aa13.42□□□□□ -0.26
LETMD1-222ENST00000550274 PDCP20941 246 aa13.42□□□□□ -0.26
LETMD1-222ENST00000550274 SYT1P21579 422 aa13.42□□□□□ -0.26
LETMD1-222ENST00000550274 ANXA13P27216 316 aa13.42□□□□□ -0.26
LETMD1-222ENST00000550274 SLC6A11P48066 632 aa13.42□□□□□ -0.26
LETMD1-222ENST00000550274 NOP14P78316 857 aaKnown RBP13.42□□□□□ -0.26
LETMD1-222ENST00000550274 MAPRE1Q15691 268 aaKnown RBP13.42□□□□□ -0.26
LETMD1-222ENST00000550274 CRY1Q16526 586 aa13.42□□□□□ -0.26
LETMD1-222ENST00000550274 TRAPPC11Q7Z392 1133 aa13.42□□□□□ -0.26
LETMD1-222ENST00000550274 C12orf40Q86WS4 652 aa13.42□□□□□ -0.26
LETMD1-222ENST00000550274 WDR49Q8IV35 697 aa13.42□□□□□ -0.26
LETMD1-222ENST00000550274 CCDC65Q8IXS2 484 aa13.42□□□□□ -0.26
LETMD1-222ENST00000550274 ALLCQ8N6M5 410 aa13.42□□□□□ -0.26
LETMD1-222ENST00000550274 CEP295NLQ96MC4 621 aa13.42□□□□□ -0.26
LETMD1-222ENST00000550274 MMS19Q96T76 1030 aa13.42□□□□□ -0.26
LETMD1-222ENST00000550274 DPEP3Q9H4B8 488 aa13.42□□□□□ -0.26
LETMD1-222ENST00000550274 UPF2Q9HAU5 1272 aaKnown RBP13.42□□□□□ -0.26
LETMD1-222ENST00000550274 NBEAQ8NFP9 2946 aa13.42□□□□□ -0.26
LETMD1-222ENST00000550274 PCDH15Q96QU1 1955 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 CDX4O14627 284 aaPredicted RBP13.41□□□□□ -0.26
LETMD1-222ENST00000550274 ABL1P00519 1130 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 OAS1P00973 400 aaKnown RBP13.41□□□□□ -0.26
LETMD1-222ENST00000550274 TAF10Q12962 218 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 SLC39A14Q15043 492 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 DHCR24Q15392 516 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 SURF1Q15526 300 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 HS2ST1Q7LGA3 356 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 CYP2U1Q7Z449 544 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 C11orf74Q86VG3 221 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 TTC30AQ86WT1 665 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 ADGRG2Q8IZP9 1017 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 FRMD1Q8N878 549 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 IL17RCQ8NAC3 791 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 RDH13Q8NBN7 331 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 TXNDC5Q8NBS9 432 aaKnown RBP13.41□□□□□ -0.26
LETMD1-222ENST00000550274 CCDC26Q8TAB7 109 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 OLIG1Q8TAK6 271 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 RLN3Q8WXF3 142 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 C8orf48Q96LL4 319 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 ZNF518BQ9C0D4 1074 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 ZDHHC4Q9NPG8 344 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 CFAP97Q9P2B7 532 aa13.41□□□□□ -0.26
LETMD1-222ENST00000550274 RALYQ9UKM9 306 aaKnown RBP13.41□□□□□ -0.26
LETMD1-222ENST00000550274 MORC2Q9Y6X9 1032 aaPredicted RBP13.41□□□□□ -0.26
LETMD1-222ENST00000550274 SGK1O00141 431 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 CLDN5O00501 218 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 KHNYNO15037 678 aaKnown RBP13.4□□□□□ -0.26
LETMD1-222ENST00000550274 TGFB1I1O43294 461 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 TACC1O75410 805 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 KAT7O95251 611 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 KLF8O95600 359 aaPredicted RBP13.4□□□□□ -0.26
LETMD1-222ENST00000550274 DLATP10515 647 aaKnown RBP13.4□□□□□ -0.26
LETMD1-222ENST00000550274 TIE1P35590 1138 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 GNL1P36915 607 aaPredicted RBP13.4□□□□□ -0.26
LETMD1-222ENST00000550274 DHPSP49366 369 aaPredicted RBP13.4□□□□□ -0.26
LETMD1-222ENST00000550274 IRX4P78413 519 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 MRPS21P82921 87 aaKnown RBP13.4□□□□□ -0.26
LETMD1-222ENST00000550274 KDSRQ06136 332 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 ZNF252P-AS1Q0IIN9 211 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 IFRD2Q12894 506 aaPredicted RBP13.4□□□□□ -0.26
LETMD1-222ENST00000550274 E2F4Q16254 413 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 SNRNP35Q16560 246 aaKnown RBP13.4□□□□□ -0.26
LETMD1-222ENST00000550274 SH3PXD2AQ5TCZ1 1133 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 EMC10Q5UCC4 262 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 DAB2IPQ5VWQ8 1189 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 RHBDF2Q6PJF5 856 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 STXBP4Q6ZWJ1 553 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 EPM2AIP1Q7L775 607 aaPredicted RBP13.4□□□□□ -0.26
LETMD1-222ENST00000550274 OR6B3Q8NGW1 331 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 FNBP1Q96RU3 617 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 PNKPQ96T60 521 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 TRIM9Q9C026 710 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 GZF1Q9H116 711 aaPredicted RBP13.4□□□□□ -0.26
LETMD1-222ENST00000550274 TNMDQ9H2S6 317 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 SNX25Q9H3E2 840 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 TMEM9BQ9NQ34 198 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 KBTBD4Q9NVX7 518 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 EHD2Q9NZN4 543 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 WASF3Q9UPY6 502 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 BAHCC1Q9P281 2608 aa13.4□□□□□ -0.26
LETMD1-222ENST00000550274 ANKRD11Q6UB99 2663 aaPredicted RBP13.39□□□□□ -0.27
LETMD1-222ENST00000550274 C1QTNF9BB2RNN3 333 aa13.39□□□□□ -0.27
LETMD1-222ENST00000550274 TOP3BO95985 862 aaKnown RBP13.39□□□□□ -0.27
LETMD1-222ENST00000550274 PROS1P07225 676 aa13.39□□□□□ -0.27
LETMD1-222ENST00000550274 C1QTNF9P0C862 333 aa13.39□□□□□ -0.27
LETMD1-222ENST00000550274 PTPN1P18031 435 aaKnown RBP13.39□□□□□ -0.27
LETMD1-222ENST00000550274 TNNI1P19237 187 aa13.39□□□□□ -0.27
LETMD1-222ENST00000550274 SPINK2P20155 84 aa13.39□□□□□ -0.27
LETMD1-222ENST00000550274 P2RY2P41231 377 aa13.39□□□□□ -0.27
LETMD1-222ENST00000550274 KIR2DL1P43626 348 aaPredicted RBP13.39□□□□□ -0.27
LETMD1-222ENST00000550274 PPP3CCP48454 512 aa13.39□□□□□ -0.27
LETMD1-222ENST00000550274 FOXC1Q12948 553 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms