RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 NCAM2O15394 837 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 FCER1AP12319 257 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 EGR1P18146 543 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 GNAT2P19087 354 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 MGAT1P26572 445 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 MAPK9P45984 424 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 CPT1AP50416 773 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 CHN2P52757 468 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 BOP1Q14137 746 aaKnown RBP4.89□□□□□ -1.63
SNRPF-202ENST00000549580 MAPRE1Q15691 268 aaKnown RBP4.89□□□□□ -1.63
SNRPF-202ENST00000549580 PLA1AQ53H76 456 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 METRNLQ641Q3 311 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 LIN54Q6MZP7 749 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 MED25Q71SY5 747 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 SYT12Q8IV01 421 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 CFAP52Q8N1V2 620 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 CLASRPQ8N2M8 674 aaKnown RBP4.89□□□□□ -1.63
SNRPF-202ENST00000549580 RAPGEF4Q8WZA2 1011 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 UBXN10Q96LJ8 280 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 KATNAL1Q9BW62 490 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 TLR10Q9BXR5 811 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.89□□□□□ -1.63
SNRPF-202ENST00000549580 SERHL2Q9H4I8 314 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 SPON1Q9HCB6 807 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 RRN3Q9NYV6 651 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 VSX1Q9NZR4 365 aaPredicted RBP4.89□□□□□ -1.63
SNRPF-202ENST00000549580 PDP2Q9P2J9 529 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.89□□□□□ -1.63
SNRPF-202ENST00000549580 ATP11BQ9Y2G3 1177 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 TBC1D30Q9Y2I9 924 aa4.89□□□□□ -1.63
SNRPF-202ENST00000549580 POLR2AP24928 1970 aaKnown RBP4.89□□□□□ -1.63
SNRPF-202ENST00000549580 COL11A2P13942 1736 aaPredicted RBP4.89□□□□□ -1.63
SNRPF-202ENST00000549580 PRRT4C9JH25 899 aa4.88□□□□□ -1.63
SNRPF-202ENST00000549580 IPO5O00410 1097 aaKnown RBP4.88□□□□□ -1.63
SNRPF-202ENST00000549580 PIP5K1BO14986 540 aa4.88□□□□□ -1.63
SNRPF-202ENST00000549580 IDEP14735 1019 aa4.88□□□□□ -1.63
SNRPF-202ENST00000549580 LAG3P18627 525 aa4.88□□□□□ -1.63
SNRPF-202ENST00000549580 IQCB1Q15051 598 aa4.88□□□□□ -1.63
SNRPF-202ENST00000549580 INSCQ1MX18 579 aa4.88□□□□□ -1.63
SNRPF-202ENST00000549580 SLC5A9Q2M3M2 681 aa4.88□□□□□ -1.63
SNRPF-202ENST00000549580 ARHGAP15Q53QZ3 475 aa4.88□□□□□ -1.63
SNRPF-202ENST00000549580 RAP1GAP2Q684P5 730 aa4.88□□□□□ -1.63
SNRPF-202ENST00000549580 NAIF1Q69YI7 327 aaPredicted RBP4.88□□□□□ -1.63
SNRPF-202ENST00000549580 CRTC1Q6UUV9 634 aa4.88□□□□□ -1.63
SNRPF-202ENST00000549580 C9orf106Q8NAJ2 232 aa4.88□□□□□ -1.63
SNRPF-202ENST00000549580 POC1BQ8TC44 478 aa4.88□□□□□ -1.63
SNRPF-202ENST00000549580 OTUD7AQ8TE49 926 aaPredicted RBP4.88□□□□□ -1.63
SNRPF-202ENST00000549580 SLC46A1Q96NT5 459 aa4.88□□□□□ -1.63
SNRPF-202ENST00000549580 SENP7Q9BQF6 1050 aa4.88□□□□□ -1.63
SNRPF-202ENST00000549580 FAM83DQ9H4H8 585 aa4.88□□□□□ -1.63
SNRPF-202ENST00000549580 POGKQ9P215 609 aa4.88□□□□□ -1.63
SNRPF-202ENST00000549580 ZMYND8Q9ULU4 1186 aaPredicted RBP4.88□□□□□ -1.63
SNRPF-202ENST00000549580 SCAF8Q9UPN6 1271 aaKnown RBP4.88□□□□□ -1.63
SNRPF-202ENST00000549580 H7C4K7 107 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 IRAK2O43187 625 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 RRP9O43818 475 aaKnown RBP4.87□□□□□ -1.63
SNRPF-202ENST00000549580 IPO13O94829 963 aaKnown RBP4.87□□□□□ -1.63
SNRPF-202ENST00000549580 TNFRSF6BO95407 300 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 AGR2O95994 175 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 ATXN1LP0C7T5 689 aaKnown RBP4.87□□□□□ -1.63
SNRPF-202ENST00000549580 NPPBP16860 134 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 TPH1P17752 444 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 POLE2P56282 527 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 PIGFQ07326 219 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 TAF5Q15542 800 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 TRIM71Q2Q1W2 868 aaKnown RBP4.87□□□□□ -1.63
SNRPF-202ENST00000549580 DCAF17Q5H9S7 520 aaPredicted RBP4.87□□□□□ -1.63
SNRPF-202ENST00000549580 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.87□□□□□ -1.63
SNRPF-202ENST00000549580 TMTC4Q5T4D3 741 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 JAKMIP3Q5VZ66 844 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 TAPT1Q6NXT6 567 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 CLEC4GQ6UXB4 293 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 RHOT2Q8IXI1 618 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 PSD4Q8NDX1 1056 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 MARS2Q96GW9 593 aaKnown RBP4.87□□□□□ -1.63
SNRPF-202ENST00000549580 LRIG1Q96JA1 1093 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 ZSCAN31Q96LW9 406 aaPredicted RBP4.87□□□□□ -1.63
SNRPF-202ENST00000549580 NEU1Q99519 415 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 PCDHAC1Q9H158 963 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 ZBTB26Q9HCK0 441 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 ZSCAN32Q9NX65 697 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 DNMT3BQ9UBC3 853 aaKnown RBP4.87□□□□□ -1.63
SNRPF-202ENST00000549580 CA14Q9ULX7 337 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 SHOC2Q9UQ13 582 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 DTNAQ9Y4J8 743 aa4.87□□□□□ -1.63
SNRPF-202ENST00000549580 EPN1Q9Y6I3 576 aaPredicted RBP4.87□□□□□ -1.63
SNRPF-202ENST00000549580 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 AQP7P3A6NL99 342 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 EIF3FO00303 357 aaPredicted RBP4.86□□□□□ -1.63
SNRPF-202ENST00000549580 POLRMTO00411 1230 aaKnown RBP4.86□□□□□ -1.63
SNRPF-202ENST00000549580 ASNA1O43681 348 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 VPS4BO75351 444 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 FAM155BO75949 473 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 GLP2RO95838 553 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 SLC5A2P31639 672 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 ATICP31939 592 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 DDIT3P35638 169 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 PTDSS1P48651 473 aaKnown RBP4.86□□□□□ -1.63
SNRPF-202ENST00000549580 PNLIPRP1P54315 467 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 TBX2Q13207 712 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms