RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 SCLT1Q96NL6 688 aa10.46□□□□□ -0.73
RAB5B-206ENST00000549505 UBN1Q9NPG3 1134 aa10.46□□□□□ -0.73
RAB5B-206ENST00000549505 ANAPC5Q9UJX4 755 aa10.46□□□□□ -0.73
RAB5B-206ENST00000549505 TPX2Q9ULW0 747 aaKnown RBP10.46□□□□□ -0.73
RAB5B-206ENST00000549505 BCLAF3A2AJT9 711 aaKnown RBP10.46□□□□□ -0.74
RAB5B-206ENST00000549505 CFAP69A5D8W1 941 aa10.46□□□□□ -0.74
RAB5B-206ENST00000549505 MYADML2A6NDP7 307 aa10.46□□□□□ -0.74
RAB5B-206ENST00000549505 RNF8O76064 485 aa10.46□□□□□ -0.74
RAB5B-206ENST00000549505 GNRH1P01148 92 aa10.46□□□□□ -0.74
RAB5B-206ENST00000549505 LMAN1P49257 510 aa10.46□□□□□ -0.74
RAB5B-206ENST00000549505 TFDP2Q14188 446 aa10.46□□□□□ -0.74
RAB5B-206ENST00000549505 DPYSL3Q14195 570 aa10.46□□□□□ -0.74
RAB5B-206ENST00000549505 SLC29A2Q14542 456 aa10.46□□□□□ -0.74
RAB5B-206ENST00000549505 TMEM130Q8N3G9 435 aa10.46□□□□□ -0.74
RAB5B-206ENST00000549505 NAT8LQ8N9F0 302 aa10.46□□□□□ -0.74
RAB5B-206ENST00000549505 RXFP2Q8WXD0 754 aa10.46□□□□□ -0.74
RAB5B-206ENST00000549505 PKMYT1Q99640 499 aa10.46□□□□□ -0.74
RAB5B-206ENST00000549505 TSEN34Q9BSV6 310 aaKnown RBP10.46□□□□□ -0.74
RAB5B-206ENST00000549505 FAM49AQ9H0Q0 323 aaPredicted RBP10.46□□□□□ -0.74
RAB5B-206ENST00000549505 EPN3Q9H201 632 aa10.46□□□□□ -0.74
RAB5B-206ENST00000549505 CDC42EP4Q9H3Q1 356 aaKnown RBP10.46□□□□□ -0.74
RAB5B-206ENST00000549505 CSNK1G1Q9HCP0 422 aa10.46□□□□□ -0.74
RAB5B-206ENST00000549505 PIN4Q9Y237 131 aaKnown RBP10.46□□□□□ -0.74
RAB5B-206ENST00000549505 USP3Q9Y6I4 520 aa10.46□□□□□ -0.74
RAB5B-206ENST00000549505 TRIP11Q15643 1979 aa10.46□□□□□ -0.74
RAB5B-206ENST00000549505 GPR182O15218 404 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 SHBGP04278 402 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 SKIP12755 728 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 CYP2B6P20813 491 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 GNL1P36915 607 aaPredicted RBP10.45□□□□□ -0.74
RAB5B-206ENST00000549505 ZNF200P98182 395 aaPredicted RBP10.45□□□□□ -0.74
RAB5B-206ENST00000549505 AUHQ13825 339 aaKnown RBP10.45□□□□□ -0.74
RAB5B-206ENST00000549505 STAT4Q14765 748 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 DAB2IPQ5VWQ8 1189 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 GDF6Q6KF10 455 aaPredicted RBP10.45□□□□□ -0.74
RAB5B-206ENST00000549505 HACE1Q8IYU2 909 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 PRCCQ92733 491 aaPredicted RBP10.45□□□□□ -0.74
RAB5B-206ENST00000549505 UROC1Q96N76 676 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 RNF157Q96PX1 679 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 SLC9A7Q96T83 725 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 DUSP16Q9BY84 665 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 RNF39Q9H2S5 420 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 SNX9Q9Y5X1 595 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 CDY2AQ9Y6F7 541 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 DAB1O75553 588 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 SSTR3P32745 418 aaPredicted RBP10.45□□□□□ -0.74
RAB5B-206ENST00000549505 BEX3Q00994 111 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 PTGISQ16647 500 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 ZSCAN26Q16670 478 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 NBPF20Q3BBV1 942 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 PAQR9Q6ZVX9 377 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 ZNF365Q70YC5 407 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 PHLDB2Q86SQ0 1253 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 CCDC50Q8IVM0 306 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 APPL2Q8NEU8 664 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 DHRS4Q9BTZ2 278 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 NINJ2Q9NZG7 142 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 CALCOCO1Q9P1Z2 691 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 PTCH2Q9Y6C5 1203 aa10.45□□□□□ -0.74
RAB5B-206ENST00000549505 CHKAP35790 457 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 LHX1P48742 406 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 ZNF135P52742 658 aaPredicted RBP10.44□□□□□ -0.74
RAB5B-206ENST00000549505 ADCY1Q08828 1119 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 EFHC1Q5JVL4 640 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 FAM102AQ5T9C2 384 aaPredicted RBP10.44□□□□□ -0.74
RAB5B-206ENST00000549505 IZUMO3Q5VZ72 239 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 LEKR1Q6ZMV7 388 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 LENG1Q96BZ8 264 aaPredicted RBP10.44□□□□□ -0.74
RAB5B-206ENST00000549505 HEMGNQ9BXL5 484 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 PLEKHA4Q9H4M7 779 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 SSU72Q9NP77 194 aaKnown RBP10.44□□□□□ -0.74
RAB5B-206ENST00000549505 PNPLA8Q9NP80 782 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 FAM105AQ9NUU6 356 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 HESX1Q9UBX0 185 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 USTQ9Y2C2 406 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 DOCK3Q8IZD9 2030 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 M0QZQ0 153 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 TRAPPC3O43617 180 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 KRT10P13645 584 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 LSP1P33241 339 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 NR2C2P49116 596 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 SCAPQ12770 1279 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 TRAF7Q6Q0C0 670 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 CD300LGQ6UXG3 332 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 ACOT1Q86TX2 421 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 OSTM1Q86WC4 334 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 PXYLP1Q8TE99 480 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 ASIC3Q9UHC3 531 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 RAD54BQ9Y620 910 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 NLRC5Q86WI3 1866 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 LRRD1A4D1F6 860 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 FBXO21O94952 628 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 ZFXP17010 805 aaPredicted RBP10.44□□□□□ -0.74
RAB5B-206ENST00000549505 ATP5DP30049 168 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 ADCY8P40145 1251 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 HDAC4P56524 1084 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 NR1H3Q13133 447 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 ERMARDQ5T6L9 678 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 YTHDF3Q7Z739 585 aaKnown RBP10.44□□□□□ -0.74
RAB5B-206ENST00000549505 ZNF598Q86UK7 904 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms