RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 DDX43Q9NXZ2 648 aaKnown RBP9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 GMNCA6NCL1 334 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 EPHB2P29323 1055 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 AKT1P31749 480 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 NPY2RP49146 381 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 FXR1P51114 621 aaKnown RBP eCLIP9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 ZNF211Q13398 564 aaPredicted RBP9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 RBBP7Q16576 425 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 FAM83EQ2M2I3 478 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 DNAL1Q4LDG9 190 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 DCLRE1AQ6PJP8 1040 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 C1orf54Q8WWF1 131 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 MAML1Q92585 1016 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 RPRD1AQ96P16 312 aaPredicted RBP9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 SUDS3Q9H7L9 328 aaPredicted RBP9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 WDR70Q9NW82 654 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 DOLKQ9UPQ8 538 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 MAPRE3Q9UPY8 281 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 COL2A1P02458 1487 aaPredicted RBP9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 ZSCAN5CA6NGD5 496 aaPredicted RBP9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 OPHN1O60890 802 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 VTNP04004 478 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 RCN2Q14257 317 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 NCAPHQ15003 741 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 LY6KQ17RY6 165 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 AGAP9Q5VTM2 703 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 E4F1Q66K89 784 aaPredicted RBP9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 ERAP2Q6P179 960 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 SV2AQ7L0J3 742 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 VPS37AQ8NEZ2 397 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 LENG9Q96B70 501 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 INPP4AQ96PE3 977 aaPredicted RBP9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 TBK1Q9UHD2 729 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 DCDC2Q9UHG0 476 aa9.6□□□□□ -0.87
PPFIA2-216ENST00000549396 H3BMM5 538 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 QSOX1O00391 747 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 ASS1P00966 412 aaKnown RBP9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 RPN2P04844 631 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 PNMA6AP0CW24 399 aaPredicted RBP9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 SMIM10L2AP0DMW4 78 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 SMIM10L2BP0DMW5 78 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 PRKCIP41743 596 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 SH3D19Q5HYK7 790 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 PPM1LQ5SGD2 360 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 KCTD16Q68DU8 428 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 LBX2Q6XYB7 198 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 LRP10Q7Z4F1 713 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 ZC3H18Q86VM9 953 aaKnown RBP9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 DNAJB3Q8WWF6 145 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 PABPC5Q96DU9 382 aaKnown RBP9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 OSMRQ99650 979 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 TRABDQ9H4I3 376 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 PLEKHA4Q9H4M7 779 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 SCUBE2Q9NQ36 999 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 ZFP69BQ9UJL9 534 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 GLRA3O75311 464 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 VPS26AO75436 327 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 TADA3O75528 432 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 CSH1P0DML2 217 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 CSH2P0DML3 217 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 MYL2P10916 166 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 AARSP49588 968 aaKnown RBP eCLIP9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 ERMARDQ5T6L9 678 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 ZNF662Q6ZS27 426 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 LRRC39Q96DD0 335 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 ZNF668Q96K58 619 aaPredicted RBP9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 CBWD1Q9BRT8 395 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 SIKE1Q9BRV8 207 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 PHACTR1Q9C0D0 580 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 AGPAT5Q9NUQ2 364 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 SLC24A2Q9UI40 661 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 HEATR9A2RTY3 570 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 SDR42E2A6NKP2 422 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 DUSP11O75319 330 aaKnown RBP9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 CKBP12277 381 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 SERPINB8P50452 374 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 SLC7A5Q01650 507 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 IRF5Q13568 498 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 GRM3Q14832 879 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 SLC45A4Q5BKX6 768 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 SCARA3Q6AZY7 606 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 LRRC43Q8N309 656 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 C2orf15Q8WU43 125 aaKnown RBP9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 FGD4Q96M96 766 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 MRPL17Q9NRX2 175 aaKnown RBP9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 CRLS1Q9UJA2 301 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 AP4E1Q9UPM8 1137 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 AFDNP55196 1824 aaKnown RBP9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 A0A1W2PQ67 120 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 PJA2O43164 708 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 CLASP2O75122 1294 aaKnown RBP9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 GFAPP14136 432 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 CDH2P19022 906 aaPredicted RBP9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 PPP3CCP48454 512 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 POLR2LP62875 67 aaKnown RBP9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 CDK16Q00536 496 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 TMTC4Q5T4D3 741 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 USP49Q70CQ1 688 aa9.59□□□□□ -0.87
PPFIA2-216ENST00000549396 PCYOX1LQ8NBM8 494 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms