RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 OLFM2O95897 454 aa19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 ARSAP15289 507 aa19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 TRIM21P19474 475 aaKnown RBP19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 YWHAQP27348 245 aa19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 NDST1P52848 882 aa19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 SLC7A9P82251 487 aa19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 TMEM196Q5HYL7 178 aa19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 ZNF658Q5TYW1 1059 aaPredicted RBP19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 SPOPLQ6IQ16 392 aa19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 SMYD4Q8IYR2 804 aaPredicted RBP19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 FUKQ8N0W3 1084 aa19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 CPA6Q8N4T0 437 aa19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 PDZD8Q8NEN9 1154 aa19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 ATP2A3Q93084 1043 aa19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 EXOC4Q96A65 974 aa19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 KCNK16Q96T55 309 aa19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 MED10Q9BTT4 135 aa19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 ECT2Q9H8V3 914 aa19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 TMEM8AQ9HCN3 771 aa19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 COMMD8Q9NX08 183 aa19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 IL37Q9NZH6 218 aa19.8■□□□□ 0.76
CHMP1A-207ENST00000549328 OTOGLQ3ZCN5 2332 aa19.79■□□□□ 0.76
CHMP1A-207ENST00000549328 TNFRSF10BO14763 440 aa19.79■□□□□ 0.76
CHMP1A-207ENST00000549328 CETN3O15182 167 aa19.79■□□□□ 0.76
CHMP1A-207ENST00000549328 TRIM49P0CI25 452 aa19.79■□□□□ 0.76
CHMP1A-207ENST00000549328 TRIM49CP0CI26 452 aa19.79■□□□□ 0.76
CHMP1A-207ENST00000549328 PRCPP42785 496 aa19.79■□□□□ 0.76
CHMP1A-207ENST00000549328 IFNAR2P48551 515 aa19.79■□□□□ 0.76
CHMP1A-207ENST00000549328 INCA1Q0VD86 236 aa19.79■□□□□ 0.76
CHMP1A-207ENST00000549328 GRSF1Q12849 480 aaKnown RBP eCLIP19.79■□□□□ 0.76
CHMP1A-207ENST00000549328 NR1H3Q13133 447 aa19.79■□□□□ 0.76
CHMP1A-207ENST00000549328 KRT39Q6A163 491 aa19.79■□□□□ 0.76
CHMP1A-207ENST00000549328 ELOA2Q8IYF1 753 aaPredicted RBP19.79■□□□□ 0.76
CHMP1A-207ENST00000549328 TAS1R2Q8TE23 839 aa19.79■□□□□ 0.76
CHMP1A-207ENST00000549328 RUBCNQ92622 972 aa19.79■□□□□ 0.76
CHMP1A-207ENST00000549328 CHFRQ96EP1 664 aa19.79■□□□□ 0.76
CHMP1A-207ENST00000549328 FAXDC2Q96IV6 333 aa19.79■□□□□ 0.76
CHMP1A-207ENST00000549328 PCDHA5Q9Y5H7 936 aa19.79■□□□□ 0.76
CHMP1A-207ENST00000549328 STX10O60499 249 aa19.78■□□□□ 0.76
CHMP1A-207ENST00000549328 AP1G2O75843 785 aa19.78■□□□□ 0.76
CHMP1A-207ENST00000549328 OAS1P00973 400 aaKnown RBP19.78■□□□□ 0.76
CHMP1A-207ENST00000549328 ZXDBP98169 803 aa19.78■□□□□ 0.76
CHMP1A-207ENST00000549328 SATB1Q01826 763 aa19.78■□□□□ 0.76
CHMP1A-207ENST00000549328 EML3Q32P44 896 aa19.78■□□□□ 0.76
CHMP1A-207ENST00000549328 SNX30Q5VWJ9 437 aa19.78■□□□□ 0.76
CHMP1A-207ENST00000549328 Q6ZS52 159 aa19.78■□□□□ 0.76
CHMP1A-207ENST00000549328 CCDC150Q8NCX0 1101 aa19.78■□□□□ 0.76
CHMP1A-207ENST00000549328 SMARCE1Q969G3 411 aa19.78■□□□□ 0.76
CHMP1A-207ENST00000549328 NIF3L1Q9GZT8 377 aa19.78■□□□□ 0.76
CHMP1A-207ENST00000549328 RNF38Q9H0F5 515 aa19.78■□□□□ 0.76
CHMP1A-207ENST00000549328 EPC1Q9H2F5 836 aa19.78■□□□□ 0.76
CHMP1A-207ENST00000549328 APOBEC3GQ9HC16 384 aaKnown RBP19.78■□□□□ 0.76
CHMP1A-207ENST00000549328 CSNK1G1Q9HCP0 422 aa19.78■□□□□ 0.76
CHMP1A-207ENST00000549328 WNT6Q9Y6F9 365 aa19.78■□□□□ 0.76
CHMP1A-207ENST00000549328 WDR87Q6ZQQ6 2873 aa19.77■□□□□ 0.76
CHMP1A-207ENST00000549328 FAM92AA1XBS5 289 aa19.77■□□□□ 0.76
CHMP1A-207ENST00000549328 ABL1P00519 1130 aa19.77■□□□□ 0.76
CHMP1A-207ENST00000549328 EPB41P11171 864 aaKnown RBP19.77■□□□□ 0.76
CHMP1A-207ENST00000549328 DRD1P21728 446 aa19.77■□□□□ 0.76
CHMP1A-207ENST00000549328 HOXA6P31267 233 aa19.77■□□□□ 0.76
CHMP1A-207ENST00000549328 GJA4P35212 333 aa19.77■□□□□ 0.76
CHMP1A-207ENST00000549328 FSTL4Q6MZW2 842 aa19.77■□□□□ 0.76
CHMP1A-207ENST00000549328 TTC16Q8NEE8 873 aa19.77■□□□□ 0.76
CHMP1A-207ENST00000549328 SLC2A14Q8TDB8 520 aa19.77■□□□□ 0.76
CHMP1A-207ENST00000549328 FBXO32Q969P5 355 aa19.77■□□□□ 0.76
CHMP1A-207ENST00000549328 HNRNPABQ99729 332 aaKnown RBP19.77■□□□□ 0.76
CHMP1A-207ENST00000549328 TSG101Q99816 390 aa19.77■□□□□ 0.76
CHMP1A-207ENST00000549328 NT5C1AQ9BXI3 368 aa19.77■□□□□ 0.76
CHMP1A-207ENST00000549328 DNAI2Q9GZS0 605 aa19.77■□□□□ 0.76
CHMP1A-207ENST00000549328 KRT82Q9NSB4 513 aa19.77■□□□□ 0.76
CHMP1A-207ENST00000549328 HMGXB4Q9UGU5 601 aa19.77■□□□□ 0.76
CHMP1A-207ENST00000549328 ZNF292O60281 2723 aa19.77■□□□□ 0.76
CHMP1A-207ENST00000549328 GPR179Q6PRD1 2367 aa19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 LEFTY2O00292 366 aa19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 ATG13O75143 517 aa19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 CCDC130P13994 396 aa19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 GALK1P51570 392 aa19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 SLC5A3P53794 718 aa19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 FKBP3Q00688 224 aaKnown RBP19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 IFRD2Q12894 506 aaPredicted RBP19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 FBXO43Q4G163 708 aa19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 DDX42Q86XP3 938 aaKnown RBP eCLIP19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 ZC3H3Q8IXZ2 948 aaKnown RBP19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 TTC39CQ8N584 583 aa19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 C12orf29Q8N999 325 aa19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 FBXL13Q8NEE6 735 aa19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 ZMIZ2Q8NF64 920 aa19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 SCAMP5Q8TAC9 235 aa19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 EEF2KMTQ96G04 330 aa19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 SMOQ99835 787 aa19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 P2RY13Q9BPV8 354 aa19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 LINC00597Q9H2U6 94 aa19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 FBXO44Q9H4M3 255 aa19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 FAM124BQ9H5Z6 455 aaPredicted RBP19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 MMRN2Q9H8L6 949 aa19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 CHORDC1Q9UHD1 332 aaPredicted RBP19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 CPQQ9Y646 472 aa19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 HELZP42694 1942 aaKnown RBP19.76■□□□□ 0.75
CHMP1A-207ENST00000549328 K7ESF4 209 aa19.75■□□□□ 0.75
CHMP1A-207ENST00000549328 SLC9A3R1O14745 358 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms