RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 A0A1B0GVL5 298 aa18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 LEFTY2O00292 366 aa18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 PHACTR2O75167 634 aa18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 NFATC1O95644 943 aa18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 PPP3CCP48454 512 aa18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 AP3M2P53677 418 aa18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 ATXN1P54253 815 aaKnown RBP18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 TAF10Q12962 218 aa18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 NCOA4Q13772 614 aa18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 GAB4Q2WGN9 574 aa18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 SCARA5Q6ZMJ2 495 aa18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 CEP68Q76N32 757 aa18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 FAM35AQ86V20 835 aa18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 GAB3Q8WWW8 586 aa18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 EXOC4Q96A65 974 aa18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 ELMO3Q96BJ8 720 aa18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 RNF38Q9H0F5 515 aa18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 SDCBP2Q9H190 292 aa18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 SEMA4GQ9NTN9 838 aa18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 SLC8A2Q9UPR5 921 aa18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 MYOFQ9NZM1 2061 aa18.51■□□□□ 0.55
CHMP1A-205ENST00000548650 C4BPAP04003 597 aaKnown RBP18.5■□□□□ 0.55
CHMP1A-205ENST00000548650 NR3C1P04150 777 aa18.5■□□□□ 0.55
CHMP1A-205ENST00000548650 CYP17A1P05093 508 aa18.5■□□□□ 0.55
CHMP1A-205ENST00000548650 OPRD1P41143 372 aa18.5■□□□□ 0.55
CHMP1A-205ENST00000548650 CDH8P55286 799 aa18.5■□□□□ 0.55
CHMP1A-205ENST00000548650 DLG4P78352 724 aa18.5■□□□□ 0.55
CHMP1A-205ENST00000548650 CSRP2Q16527 193 aa18.5■□□□□ 0.55
CHMP1A-205ENST00000548650 ZNF667Q5HYK9 610 aa18.5■□□□□ 0.55
CHMP1A-205ENST00000548650 PRR23CQ6ZRP0 262 aa18.5■□□□□ 0.55
CHMP1A-205ENST00000548650 KIAA1958Q8N8K9 716 aa18.5■□□□□ 0.55
CHMP1A-205ENST00000548650 RPLP0P6Q8NHW5 317 aa18.5■□□□□ 0.55
CHMP1A-205ENST00000548650 SLITRK1Q96PX8 696 aa18.5■□□□□ 0.55
CHMP1A-205ENST00000548650 HHIPQ96QV1 700 aa18.5■□□□□ 0.55
CHMP1A-205ENST00000548650 ZDHHC9Q9Y397 364 aa18.5■□□□□ 0.55
CHMP1A-205ENST00000548650 CPQQ9Y646 472 aa18.5■□□□□ 0.55
CHMP1A-205ENST00000548650 PDXKO00764 312 aa18.49■□□□□ 0.55
CHMP1A-205ENST00000548650 RPP40O75818 363 aaKnown RBP18.49■□□□□ 0.55
CHMP1A-205ENST00000548650 MYL1P05976 194 aa18.49■□□□□ 0.55
CHMP1A-205ENST00000548650 CMA1P23946 247 aa18.49■□□□□ 0.55
CHMP1A-205ENST00000548650 IFRD2Q12894 506 aaPredicted RBP18.49■□□□□ 0.55
CHMP1A-205ENST00000548650 PSMD2Q13200 908 aa18.49■□□□□ 0.55
CHMP1A-205ENST00000548650 ZACNQ401N2 412 aa18.49■□□□□ 0.55
CHMP1A-205ENST00000548650 PAQR9Q6ZVX9 377 aa18.49■□□□□ 0.55
CHMP1A-205ENST00000548650 SYT13Q7L8C5 426 aa18.49■□□□□ 0.55
CHMP1A-205ENST00000548650 FILIP1Q7Z7B0 1213 aa18.49■□□□□ 0.55
CHMP1A-205ENST00000548650 CAMKK1Q8N5S9 505 aa18.49■□□□□ 0.55
CHMP1A-205ENST00000548650 ACDQ96AP0 544 aa18.49■□□□□ 0.55
CHMP1A-205ENST00000548650 RTKNQ9BST9 563 aa18.49■□□□□ 0.55
CHMP1A-205ENST00000548650 SMPD4Q9NXE4 827 aa18.49■□□□□ 0.55
CHMP1A-205ENST00000548650 USP25Q9UHP3 1055 aa18.49■□□□□ 0.55
CHMP1A-205ENST00000548650 ATP8B3O60423 1300 aa18.49■□□□□ 0.55
CHMP1A-205ENST00000548650 FAM237AA0A1B0GTK4 181 aa18.48■□□□□ 0.55
CHMP1A-205ENST00000548650 CLSTN1O94985 981 aa18.48■□□□□ 0.55
CHMP1A-205ENST00000548650 PRR29P0C7W0 189 aa18.48■□□□□ 0.55
CHMP1A-205ENST00000548650 NR1H3Q13133 447 aa18.48■□□□□ 0.55
CHMP1A-205ENST00000548650 NUP93Q8N1F7 819 aa18.48■□□□□ 0.55
CHMP1A-205ENST00000548650 NETO1Q8TDF5 533 aa18.48■□□□□ 0.55
CHMP1A-205ENST00000548650 SPATA32Q96LK8 384 aa18.48■□□□□ 0.55
CHMP1A-205ENST00000548650 KCNK16Q96T55 309 aa18.48■□□□□ 0.55
CHMP1A-205ENST00000548650 DMAP1Q9NPF5 467 aaPredicted RBP18.48■□□□□ 0.55
CHMP1A-205ENST00000548650 KRT82Q9NSB4 513 aa18.48■□□□□ 0.55
CHMP1A-205ENST00000548650 HMGXB4Q9UGU5 601 aa18.48■□□□□ 0.55
CHMP1A-205ENST00000548650 TNFRSF10BO14763 440 aa18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 SCAMP3O14828 347 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 AKAP3O75969 853 aa18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 RTN3O95197 1032 aaPredicted RBP18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 EPN2O95208 641 aa18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 ABL1P00519 1130 aa18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 RPN1P04843 607 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 YWHAQP27348 245 aa18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 ASPAP45381 313 aa18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 SLC5A3P53794 718 aa18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 KRT85P78386 507 aa18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 DMC1Q14565 340 aa18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 C1orf220Q5T0J3 134 aa18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 KBTBD6Q86V97 674 aa18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 FUKQ8N0W3 1084 aa18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 PDZD8Q8NEN9 1154 aa18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 TMC2Q8TDI7 906 aa18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 OVCA2Q8WZ82 227 aa18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 FBXO32Q969P5 355 aa18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 SMARCD1Q96GM5 515 aa18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 TNIP3Q96KP6 325 aa18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 ZFRQ96KR1 1074 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 CFAP97Q9P2B7 532 aa18.47■□□□□ 0.55
CHMP1A-205ENST00000548650 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.46■□□□□ 0.55
CHMP1A-205ENST00000548650 SLC30A4O14863 429 aa18.46■□□□□ 0.55
CHMP1A-205ENST00000548650 AXIN1O15169 862 aa18.46■□□□□ 0.55
CHMP1A-205ENST00000548650 ASS1P00966 412 aaKnown RBP18.46■□□□□ 0.55
CHMP1A-205ENST00000548650 CCDC192P0DO97 292 aa18.46■□□□□ 0.55
CHMP1A-205ENST00000548650 MBL2P11226 248 aaPredicted RBP18.46■□□□□ 0.55
CHMP1A-205ENST00000548650 CCDC130P13994 396 aa18.46■□□□□ 0.55
CHMP1A-205ENST00000548650 NDUFA8P51970 172 aa18.46■□□□□ 0.55
CHMP1A-205ENST00000548650 ORC1Q13415 861 aa18.46■□□□□ 0.55
CHMP1A-205ENST00000548650 SV2AQ7L0J3 742 aa18.46■□□□□ 0.55
CHMP1A-205ENST00000548650 CACNA2D4Q7Z3S7 1137 aa18.46■□□□□ 0.55
CHMP1A-205ENST00000548650 ACOT1Q86TX2 421 aa18.46■□□□□ 0.55
CHMP1A-205ENST00000548650 DDX42Q86XP3 938 aaKnown RBP eCLIP18.46■□□□□ 0.55
CHMP1A-205ENST00000548650 ZMIZ2Q8NF64 920 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms