RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 GAP43P17677 238 aa15.06■□□□□ 0
PTCH1-217ENST00000548420 CCR10P46092 362 aa15.06■□□□□ 0
PTCH1-217ENST00000548420 LMBRD2Q68DH5 695 aaPredicted RBP15.06■□□□□ 0
PTCH1-217ENST00000548420 DHRS13Q6UX07 377 aa15.06■□□□□ 0
PTCH1-217ENST00000548420 RABEPKQ7Z6M1 372 aa15.06■□□□□ 0
PTCH1-217ENST00000548420 SPACA3Q8IXA5 215 aa15.06■□□□□ 0
PTCH1-217ENST00000548420 IQUBQ8NA54 791 aa15.06■□□□□ 0
PTCH1-217ENST00000548420 LEO1Q8WVC0 666 aaPredicted RBP15.06■□□□□ 0
PTCH1-217ENST00000548420 HMGB4Q8WW32 186 aa15.06■□□□□ 0
PTCH1-217ENST00000548420 UROC1Q96N76 676 aa15.06■□□□□ 0
PTCH1-217ENST00000548420 TCHPQ9BT92 498 aa15.06■□□□□ 0
PTCH1-217ENST00000548420 TNMDQ9H2S6 317 aa15.06■□□□□ 0
PTCH1-217ENST00000548420 OLFML3Q9NRN5 406 aa15.06■□□□□ 0
PTCH1-217ENST00000548420 USP9YO00507 2555 aaPredicted RBP15.06■□□□□ 0
PTCH1-217ENST00000548420 UTP20O75691 2785 aaKnown RBP15.06■□□□□ 0
PTCH1-217ENST00000548420 SMIM28A0A1B0GU29 152 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 K7ENM7 598 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 CLDN3O15551 220 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 FAM189A1O60320 539 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 ALDH1A2O94788 518 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 ADRB2P07550 413 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 KCNE1P15382 129 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 ADSSP30520 456 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 OPRD1P41143 372 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 ME1P48163 572 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 RHDQ02161 417 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 MESP2Q0VG99 397 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 NOLC1Q14978 699 aaKnown RBP eCLIP15.05■□□□□ -0
PTCH1-217ENST00000548420 PTPRNQ16849 979 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 PKDCCQ504Y2 493 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 ZNF280DQ6N043 979 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 SLC39A4Q6P5W5 647 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 PRICKLE2Q7Z3G6 844 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 TMEM150AQ86TG1 271 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 SFR1Q86XK3 245 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 ALLCQ8N6M5 410 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 IL17RCQ8NAC3 791 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 TXNDC5Q8NBS9 432 aaKnown RBP15.05■□□□□ -0
PTCH1-217ENST00000548420 HVCN1Q96D96 273 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 NXPE2Q96DL1 559 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 ACAP3Q96P50 834 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 CCDC94Q9BW85 323 aaPredicted RBP15.05■□□□□ -0
PTCH1-217ENST00000548420 ZHX3Q9H4I2 956 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 ZDHHC4Q9NPG8 344 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 TOPORSQ9NS56 1045 aaPredicted RBP15.05■□□□□ -0
PTCH1-217ENST00000548420 CNTN3Q9P232 1028 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 STYXL1Q9Y6J8 313 aa15.05■□□□□ -0
PTCH1-217ENST00000548420 C2CD3Q4AC94 2353 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 MYLKQ15746 1914 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 A0A0B4J269 797 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 PODXLO00592 558 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 POLR2DO15514 142 aaKnown RBP15.04■□□□□ -0
PTCH1-217ENST00000548420 ADAM23O75077 832 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 CMA1P23946 247 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 MAOBP27338 520 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 KRT85P78386 507 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 BNC1Q01954 994 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 CCDC173Q0VFZ6 552 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 PLD1Q13393 1074 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 PDGFRLQ15198 375 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 GAB4Q2WGN9 574 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 SLC10A6Q3KNW5 377 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 ZC2HC1CQ53FD0 456 aaPredicted RBP15.04■□□□□ -0
PTCH1-217ENST00000548420 EMC10Q5UCC4 262 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 ADALQ6DHV7 355 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 CENPPQ6IPU0 288 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 TMEM130Q8N3G9 435 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 TRIML1Q8N9V2 468 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 ATAD1Q8NBU5 361 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 ZMAT2Q96NC0 199 aaKnown RBP15.04■□□□□ -0
PTCH1-217ENST00000548420 C7orf25Q9BPX7 421 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 LPIN3Q9BQK8 851 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 TRIM9Q9C026 710 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 LRRC27Q9C0I9 530 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 MAGEF1Q9HAY2 307 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 BCCIPQ9P287 314 aaKnown RBP eCLIP15.04■□□□□ -0
PTCH1-217ENST00000548420 FNDC3AQ9Y2H6 1198 aaKnown RBP15.04■□□□□ -0
PTCH1-217ENST00000548420 ATP6V1DQ9Y5K8 247 aa15.04■□□□□ -0
PTCH1-217ENST00000548420 FAM237AA0A1B0GTK4 181 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 TERTO14746 1132 aaKnown RBP15.03■□□□□ -0
PTCH1-217ENST00000548420 KLF8O95600 359 aaPredicted RBP15.03■□□□□ -0
PTCH1-217ENST00000548420 CLTAP09496 248 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 ALDH1A3P47895 512 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 YARSP54577 528 aaKnown RBP15.03■□□□□ -0
PTCH1-217ENST00000548420 OSTNP61366 133 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 AMPD3Q01432 767 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 KCNH2Q12809 1159 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 KYAT1Q16773 422 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 CCDC157Q569K6 752 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 CPA6Q8N4T0 437 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 MAB21L3Q8N8X9 362 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 RHBDD1Q8TEB9 315 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 DHX58Q96C10 678 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 MED8Q96G25 268 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 SUSD3Q96L08 255 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 HSPA12BQ96MM6 686 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 PLEKHA5Q9HAU0 1116 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 CPNE5Q9HCH3 593 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 TM7SF3Q9NS93 570 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 TDP1Q9NUW8 608 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms