RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 KRT14P02533 472 aa17.42■□□□□ 0.38
CHMP1A-204ENST00000547687 FNTAP49354 379 aa17.42■□□□□ 0.38
CHMP1A-204ENST00000547687 ORC1Q13415 861 aa17.42■□□□□ 0.38
CHMP1A-204ENST00000547687 LLGL1Q15334 1064 aa17.42■□□□□ 0.38
CHMP1A-204ENST00000547687 TTMPQ5BVD1 217 aa17.42■□□□□ 0.38
CHMP1A-204ENST00000547687 SLC24A5Q71RS6 500 aa17.42■□□□□ 0.38
CHMP1A-204ENST00000547687 WDTC1Q8N5D0 677 aa17.42■□□□□ 0.38
CHMP1A-204ENST00000547687 C12orf50Q8NA57 414 aaPredicted RBP17.42■□□□□ 0.38
CHMP1A-204ENST00000547687 MAIP1Q8WWC4 291 aa17.42■□□□□ 0.38
CHMP1A-204ENST00000547687 TWNKQ96RR1 684 aa17.42■□□□□ 0.38
CHMP1A-204ENST00000547687 TSPAN18Q96SJ8 248 aa17.42■□□□□ 0.38
CHMP1A-204ENST00000547687 LRRC19Q9H756 370 aa17.42■□□□□ 0.38
CHMP1A-204ENST00000547687 IP6K2Q9UHH9 426 aa17.42■□□□□ 0.38
CHMP1A-204ENST00000547687 USTQ9Y2C2 406 aa17.42■□□□□ 0.38
CHMP1A-204ENST00000547687 CEP83Q9Y592 693 aa17.42■□□□□ 0.38
CHMP1A-204ENST00000547687 SNX9Q9Y5X1 595 aa17.42■□□□□ 0.38
CHMP1A-204ENST00000547687 PSTPIP1O43586 416 aa17.41■□□□□ 0.38
CHMP1A-204ENST00000547687 XPOTO43592 962 aaKnown RBP17.41■□□□□ 0.38
CHMP1A-204ENST00000547687 CILPO75339 1184 aa17.41■□□□□ 0.38
CHMP1A-204ENST00000547687 CDH5P33151 784 aaPredicted RBP17.41■□□□□ 0.38
CHMP1A-204ENST00000547687 MAN1A1P33908 653 aa17.41■□□□□ 0.38
CHMP1A-204ENST00000547687 MLH1P40692 756 aa17.41■□□□□ 0.38
CHMP1A-204ENST00000547687 AFF1P51825 1210 aaKnown RBP17.41■□□□□ 0.38
CHMP1A-204ENST00000547687 RAD23BP54727 409 aa17.41■□□□□ 0.38
CHMP1A-204ENST00000547687 MTMR3Q13615 1198 aa17.41■□□□□ 0.38
CHMP1A-204ENST00000547687 UAP1Q16222 522 aaPredicted RBP17.41■□□□□ 0.38
CHMP1A-204ENST00000547687 DAB2IPQ5VWQ8 1189 aa17.41■□□□□ 0.38
CHMP1A-204ENST00000547687 LRIG3Q6UXM1 1119 aa17.41■□□□□ 0.38
CHMP1A-204ENST00000547687 LRRC52Q8N7C0 313 aa17.41■□□□□ 0.38
CHMP1A-204ENST00000547687 GSTCDQ8NEC7 633 aa17.41■□□□□ 0.38
CHMP1A-204ENST00000547687 FMO2Q99518 471 aa17.41■□□□□ 0.38
CHMP1A-204ENST00000547687 ZDHHC18Q9NUE0 388 aa17.41■□□□□ 0.38
CHMP1A-204ENST00000547687 TMEM191CA6NGB0 347 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 PIRO00625 290 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 MED7O43513 233 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 CD19P15391 556 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 SSR1P43307 286 aaKnown RBP17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 TAS2R40P59535 323 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 DHX9Q08211 1270 aaKnown RBP17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 AGMOQ6ZNB7 445 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 TMC3Q7Z5M5 1100 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 ERICH1Q86X53 443 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 SLC4A11Q8NBS3 891 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 PPP1R10Q96QC0 940 aaKnown RBP17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 GAD1Q99259 594 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 ELOVL4Q9GZR5 314 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 TBKBP1A7MCY6 615 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 GBP1P32455 592 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 KCNJ1P48048 391 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 RPL7AP62424 266 aaKnown RBP17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 GPM6BQ13491 265 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 SGO2Q562F6 1265 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 DENND1BQ6P3S1 775 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 DNAJC24Q6P3W2 148 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 HACE1Q8IYU2 909 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 UBLCP1Q8WVY7 318 aaPredicted RBP17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 C1orf54Q8WWF1 131 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 TRAIPQ9BWF2 469 aa17.4■□□□□ 0.38
CHMP1A-204ENST00000547687 A0A0U1RQF3 1178 aa17.39■□□□□ 0.37
CHMP1A-204ENST00000547687 TCRBV5S1A1TA0A578 114 aa17.39■□□□□ 0.37
CHMP1A-204ENST00000547687 O00370 1275 aa17.39■□□□□ 0.37
CHMP1A-204ENST00000547687 PAEPP09466 180 aa17.39■□□□□ 0.37
CHMP1A-204ENST00000547687 CYP3A5P20815 502 aa17.39■□□□□ 0.37
CHMP1A-204ENST00000547687 NDST1P52848 882 aa17.39■□□□□ 0.37
CHMP1A-204ENST00000547687 PLTPP55058 493 aa17.39■□□□□ 0.37
CHMP1A-204ENST00000547687 TFF2Q03403 129 aa17.39■□□□□ 0.37
CHMP1A-204ENST00000547687 INCA1Q0VD86 236 aa17.39■□□□□ 0.37
CHMP1A-204ENST00000547687 MRPL10Q7Z7H8 261 aaKnown RBP17.39■□□□□ 0.37
CHMP1A-204ENST00000547687 CCDC50Q8IVM0 306 aa17.39■□□□□ 0.37
CHMP1A-204ENST00000547687 KATNAL2Q8IYT4 538 aa17.39■□□□□ 0.37
CHMP1A-204ENST00000547687 TMEM176AQ96HP8 235 aa17.39■□□□□ 0.37
CHMP1A-204ENST00000547687 LHX5Q9H2C1 402 aa17.39■□□□□ 0.37
CHMP1A-204ENST00000547687 ALG13Q9NP73 1137 aaKnown RBP17.39■□□□□ 0.37
CHMP1A-204ENST00000547687 MIOSQ9NXC5 875 aa17.39■□□□□ 0.37
CHMP1A-204ENST00000547687 LCMT1Q9UIC8 334 aa17.39■□□□□ 0.37
CHMP1A-204ENST00000547687 BARX2Q9UMQ3 279 aaPredicted RBP17.39■□□□□ 0.37
CHMP1A-204ENST00000547687 ZNF623O75123 536 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 PPFIA2O75334 1257 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 ECEL1O95672 775 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 ATF7P17544 494 aaPredicted RBP17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 RPL21P46778 160 aaKnown RBP17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 CEP85LQ5SZL2 805 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 DCUN1D2Q6PH85 259 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 ZDHHC24Q6UX98 284 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 GRHL1Q9NZI5 618 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 GIT1Q9Y2X7 761 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 NFS1Q9Y697 457 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 NCOR1O75376 2440 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 ARL5CA6NH57 179 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 H3BNC9 293 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 SPTLC1O15269 473 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 GRM6O15303 877 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 POU3F3P20264 500 aaPredicted RBP17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 BMPR1AP36894 532 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 RAB27AP51159 221 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 FAM189BP81408 668 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 SNX1Q13596 522 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 ECHDC2Q86YB7 292 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 EXD1Q8NHP7 514 aa17.38■□□□□ 0.37
CHMP1A-204ENST00000547687 CLP1Q92989 425 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms