RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 TNFRSF10BO14763 440 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 CHADO15335 359 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 USP17L7P0C7H9 530 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 CD19P15391 556 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 AOC1P19801 751 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 PDE6CP51160 858 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 CLCN5P51795 746 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 PRKCQQ04759 706 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 GOLGA7BQ2TAP0 167 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 RRAGAQ7L523 313 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 UBR7Q8N806 425 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 PDZD8Q8NEN9 1154 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 RIN3Q8TB24 985 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 CSGALNACT1Q8TDX6 532 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 CYP2S1Q96SQ9 504 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 TDP1Q9NUW8 608 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 GMIPQ9P107 970 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 PCDHB4Q9Y5E5 795 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 ZNF318Q5VUA4 2279 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 KIF26AQ9ULI4 1882 aaPredicted RBP12.51□□□□□ -0.41
RAB5C-204ENST00000547517 ANAPC1Q9H1A4 1944 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 SOBPA7XYQ1 873 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 PI15O43692 258 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 HDCP19113 662 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 CD72P21854 359 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 PPP3CCP48454 512 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 STARD6P59095 220 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 USP4Q13107 963 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 ZNF268Q14587 947 aaPredicted RBP12.5□□□□□ -0.41
RAB5C-204ENST00000547517 MTF1Q14872 753 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 UBXN2BQ14CS0 331 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 STX1AQ16623 288 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 ARHGAP29Q52LW3 1261 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 SGO2Q562F6 1265 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 ARHGAP17Q68EM7 881 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 PHLDB3Q6NSJ2 640 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 TMEM270Q6UE05 265 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 SASS6Q6UVJ0 657 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 EHBP1Q8NDI1 1231 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 PJA1Q8NG27 643 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 TTC8Q8TAM2 541 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 CRACR2AQ9BSW2 395 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 DUSP16Q9BY84 665 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 THG1LQ9NWX6 298 aaKnown RBP12.5□□□□□ -0.41
RAB5C-204ENST00000547517 PIAS3Q9Y6X2 628 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 MYH10P35580 1976 aa12.5□□□□□ -0.41
RAB5C-204ENST00000547517 ZNF638Q14966 1978 aaKnown RBP12.5□□□□□ -0.41
RAB5C-204ENST00000547517 HELZP42694 1942 aaKnown RBP12.49□□□□□ -0.41
RAB5C-204ENST00000547517 KANSL1LA0AUZ9 987 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 HHLA1C9JL84 531 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 CYP26A1O43174 497 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 OAS1P00973 400 aaKnown RBP12.49□□□□□ -0.41
RAB5C-204ENST00000547517 DCNP07585 359 aaKnown RBP12.49□□□□□ -0.41
RAB5C-204ENST00000547517 PRKCSHP14314 528 aaPredicted RBP12.49□□□□□ -0.41
RAB5C-204ENST00000547517 ACO1P21399 889 aaKnown RBP12.49□□□□□ -0.41
RAB5C-204ENST00000547517 SOX9P48436 509 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 KPNA1P52294 538 aaPredicted RBP12.49□□□□□ -0.41
RAB5C-204ENST00000547517 PLCB2Q00722 1185 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 GCNT1Q02742 428 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 TNK2Q07912 1038 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 ZNF77Q15935 545 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 MAN2A1Q16706 1144 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 TRIM68Q6AZZ1 485 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 CC2D1AQ6P1N0 951 aaPredicted RBP12.49□□□□□ -0.41
RAB5C-204ENST00000547517 TRIM65Q6PJ69 517 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 GBP6Q6ZN66 633 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 C11orf57Q6ZUT1 292 aaPredicted RBP12.49□□□□□ -0.41
RAB5C-204ENST00000547517 TTC30AQ86WT1 665 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 RBBP8NLQ8NC74 664 aaPredicted RBP12.49□□□□□ -0.41
RAB5C-204ENST00000547517 PRSS33Q8NF86 280 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 SH3RF2Q8TEC5 729 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 OVCA2Q8WZ82 227 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 KREMEN1Q96MU8 473 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 DDX23Q9BUQ8 820 aaKnown RBP12.49□□□□□ -0.41
RAB5C-204ENST00000547517 FBXO44Q9H4M3 255 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 PNPLA8Q9NP80 782 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 LTB4R2Q9NPC1 389 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 TRPV5Q9NQA5 729 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 SAMSN1Q9NSI8 373 aaKnown RBP12.49□□□□□ -0.41
RAB5C-204ENST00000547517 ANO10Q9NW15 660 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 COMMD8Q9NX08 183 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 SMPD4Q9NXE4 827 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 GTSE1Q9NYZ3 720 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 IL37Q9NZH6 218 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 TMEM63CQ9P1W3 806 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 TSPAN16Q9UKR8 245 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 ARHGAP26Q9UNA1 814 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 SIT1Q9Y3P8 196 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 NFE2L3Q9Y4A8 694 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 WDFY4Q6ZS81 3184 aa12.49□□□□□ -0.41
RAB5C-204ENST00000547517 FAM92AA1XBS5 289 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 KCNJ18B7U540 433 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 PES1O00541 588 aaKnown RBP12.48□□□□□ -0.41
RAB5C-204ENST00000547517 COCHO43405 550 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 OLFM2O95897 454 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 MBL2P11226 248 aaPredicted RBP12.48□□□□□ -0.41
RAB5C-204ENST00000547517 VDRP11473 427 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 KRT5P13647 590 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 PFKLP17858 780 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 KCNA4P22459 653 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 246.5 ms