RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-210	ENST00000547374	LDHA	P00338	332 aa	Known RBP	13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	KCNA2	P16389	499 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	SLC8A3	P57103	927 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	KIAA0319L	Q8IZA0	1049 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	CCNY	Q8ND76	341 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	AGAP3	Q96P47	875 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	SRPK1	Q96SB4	655 aa	Known RBP	13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	MAGEB5	Q9BZ81	275 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	LRMDA	Q9H2I8	198 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	ARHGAP28	Q9P2N2	729 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	USP18	Q9UMW8	372 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	KRT7	P08729	469 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	KCNA3	P22001	575 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	KDELR1	P24390	212 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	TCF7	P36402	384 aa	Predicted RBP	13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	SERPINB4	P48594	390 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	TMEM62	Q0P6H9	643 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	BIRC2	Q13490	618 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	TMEM132B	Q14DG7	1078 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	ACSBG2	Q5FVE4	666 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	EEF1DP3	Q658K8	133 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	FBXO27	Q8NI29	283 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	FAM149B1	Q96BN6	582 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	MRI	Q9BWK5	157 aa		13.55	□□□□□ -0.24
BRF1-210	ENST00000547374	CEP350	Q5VT06	3117 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	PDE5A	O76074	875 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	GNAT1	P11488	350 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	KCNA4	P22459	653 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	AMPD1	P23109	780 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	RBL1	P28749	1068 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	NUMB	P49757	651 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	UBAP2L	Q14157	1087 aa	Known RBP	13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	TTLL12	Q14166	644 aa	Predicted RBP	13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	DPYSL3	Q14195	570 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	CDHR3	Q6ZTQ4	885 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	PHF13	Q86YI8	300 aa	Predicted RBP	13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	RIBC1	Q8N443	379 aa	Predicted RBP	13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	SLC26A7	Q8TE54	656 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	DEPDC1B	Q8WUY9	529 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	TEKT4	Q8WW24	435 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	LPAR1	Q92633	364 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	DHX35	Q9H5Z1	703 aa	Known RBP	13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	SENP1	Q9P0U3	644 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	TXNDC16	Q9P2K2	825 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	SBF2	Q86WG5	1849 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	MAP3K7	O43318	606 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	LYPLA1	O75608	230 aa	Predicted RBP	13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	GTF2A2	P52657	109 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	GJC2	Q5T442	439 aa	Predicted RBP	13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	GADL1	Q6ZQY3	521 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	SLCO2A1	Q92959	643 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	CPB2	Q96IY4	423 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	FBXL18	Q96ME1	805 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	TIPIN	Q9BVW5	301 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	UNK	Q9C0B0	810 aa	Known RBP	13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	ACAD9	Q9H845	621 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	BATF3	Q9NR55	127 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	SHOC2	Q9UQ13	582 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	CXorf49	A8MYA2	514 aa	Predicted RBP	13.54	□□□□□ -0.24
BRF1-210	ENST00000547374		H0YCG3	227 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	STK10	O94804	968 aa	Known RBP	13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	ATP4A	P20648	1035 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	RPL10A	P62906	217 aa	Known RBP	13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	MOGS	Q13724	837 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	ANO7	Q6IWH7	933 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	RGS9BP	Q6ZS82	235 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	SCUBE3	Q8IX30	993 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	MICALL2	Q8IY33	904 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	NME8	Q8N427	588 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	FBXO41	Q8TF61	875 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	GBP5	Q96PP8	586 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	BTBD10	Q9BSF8	475 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	MRPL4	Q9BYD3	311 aa	Known RBP	13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	RPF1	Q9H9Y2	349 aa	Known RBP	13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	SCOC	Q9UIL1	159 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	HACL1	Q9UJ83	578 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374	ZNRF3	Q9ULT6	936 aa		13.54	□□□□□ -0.24
BRF1-210	ENST00000547374		E5RJQ4	531 aa		13.53	□□□□□ -0.24
BRF1-210	ENST00000547374	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
BRF1-210	ENST00000547374	KRT37	O76014	449 aa		13.53	□□□□□ -0.24
BRF1-210	ENST00000547374	SKI	P12755	728 aa		13.53	□□□□□ -0.24
BRF1-210	ENST00000547374	GRIA1	P42261	906 aa		13.53	□□□□□ -0.24
BRF1-210	ENST00000547374	BST1	Q10588	318 aa		13.53	□□□□□ -0.24
BRF1-210	ENST00000547374	TEX9	Q8N6V9	391 aa		13.53	□□□□□ -0.24
BRF1-210	ENST00000547374	RXFP2	Q8WXD0	754 aa		13.53	□□□□□ -0.24
BRF1-210	ENST00000547374	COPS5	Q92905	334 aa		13.53	□□□□□ -0.24
BRF1-210	ENST00000547374	PIWIL1	Q96J94	861 aa	Known RBP	13.53	□□□□□ -0.24
BRF1-210	ENST00000547374	LPIN3	Q9BQK8	851 aa		13.53	□□□□□ -0.24
BRF1-210	ENST00000547374	VPS11	Q9H270	941 aa		13.53	□□□□□ -0.24
BRF1-210	ENST00000547374	SMYD2	Q9NRG4	433 aa		13.53	□□□□□ -0.24
BRF1-210	ENST00000547374	AKT3	Q9Y243	479 aa		13.53	□□□□□ -0.24
BRF1-210	ENST00000547374	FIS1	Q9Y3D6	152 aa		13.53	□□□□□ -0.24
BRF1-210	ENST00000547374	ATP8B3	O60423	1300 aa		13.53	□□□□□ -0.24
BRF1-210	ENST00000547374	ATRNL1	Q5VV63	1379 aa		13.53	□□□□□ -0.24
BRF1-210	ENST00000547374		A0A0B4J269	797 aa		13.53	□□□□□ -0.24
BRF1-210	ENST00000547374	LYPLA2	O95372	231 aa		13.53	□□□□□ -0.24
BRF1-210	ENST00000547374	HMGCR	P04035	888 aa		13.53	□□□□□ -0.24
BRF1-210	ENST00000547374	GLRA4	Q5JXX5	417 aa		13.53	□□□□□ -0.24
BRF1-210	ENST00000547374	IL31	Q6EBC2	164 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms