RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 CCDC38Q502W7 563 aa7.2□□□□□ -1.26
NPAS3-204ENST00000546849 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.2□□□□□ -1.26
NPAS3-204ENST00000546849 FAM83BQ5T0W9 1011 aa7.2□□□□□ -1.26
NPAS3-204ENST00000546849 ZNF618Q5T7W0 954 aa7.2□□□□□ -1.26
NPAS3-204ENST00000546849 ARL6IP4Q66PJ3 421 aaKnown RBP7.2□□□□□ -1.26
NPAS3-204ENST00000546849 VWA1Q6PCB0 445 aa7.2□□□□□ -1.26
NPAS3-204ENST00000546849 RHOUQ7L0Q8 258 aa7.2□□□□□ -1.26
NPAS3-204ENST00000546849 SMC5Q8IY18 1101 aa7.2□□□□□ -1.26
NPAS3-204ENST00000546849 ABRAQ8N0Z2 381 aa7.2□□□□□ -1.26
NPAS3-204ENST00000546849 FAM109AQ8N4B1 249 aa7.2□□□□□ -1.26
NPAS3-204ENST00000546849 CCT6BQ92526 530 aa7.2□□□□□ -1.26
NPAS3-204ENST00000546849 GRAMD1AQ96CP6 724 aa7.2□□□□□ -1.26
NPAS3-204ENST00000546849 HIST1H2AAQ96QV6 131 aa7.2□□□□□ -1.26
NPAS3-204ENST00000546849 DPCDQ9BVM2 203 aaPredicted RBP7.2□□□□□ -1.26
NPAS3-204ENST00000546849 INO80BQ9C086 356 aaPredicted RBP7.2□□□□□ -1.26
NPAS3-204ENST00000546849 ZBTB26Q9HCK0 441 aa7.2□□□□□ -1.26
NPAS3-204ENST00000546849 PTPRHQ9HD43 1115 aa7.2□□□□□ -1.26
NPAS3-204ENST00000546849 LRIT1Q9P2V4 623 aa7.2□□□□□ -1.26
NPAS3-204ENST00000546849 DKK4Q9UBT3 224 aa7.2□□□□□ -1.26
NPAS3-204ENST00000546849 SSX2IPQ9Y2D8 614 aa7.2□□□□□ -1.26
NPAS3-204ENST00000546849 HS3ST4Q9Y661 456 aa7.2□□□□□ -1.26
NPAS3-204ENST00000546849 GOLGA6L3A6NEY3 463 aa7.19□□□□□ -1.26
NPAS3-204ENST00000546849 CSF1RP07333 972 aa7.19□□□□□ -1.26
NPAS3-204ENST00000546849 RHOP08100 348 aa7.19□□□□□ -1.26
NPAS3-204ENST00000546849 EGR2P11161 476 aaPredicted RBP7.19□□□□□ -1.26
NPAS3-204ENST00000546849 HGFP14210 728 aa7.19□□□□□ -1.26
NPAS3-204ENST00000546849 BCAT1P54687 386 aa7.19□□□□□ -1.26
NPAS3-204ENST00000546849 PDE1AP54750 535 aa7.19□□□□□ -1.26
NPAS3-204ENST00000546849 ABHD18Q0P651 414 aa7.19□□□□□ -1.26
NPAS3-204ENST00000546849 TTC30AQ86WT1 665 aa7.19□□□□□ -1.26
NPAS3-204ENST00000546849 IZUMO1Q8IYV9 350 aa7.19□□□□□ -1.26
NPAS3-204ENST00000546849 CYP2W1Q8TAV3 490 aa7.19□□□□□ -1.26
NPAS3-204ENST00000546849 IPO4Q8TEX9 1081 aaKnown RBP7.19□□□□□ -1.26
NPAS3-204ENST00000546849 XAGE5Q8WWM1 108 aa7.19□□□□□ -1.26
NPAS3-204ENST00000546849 C17orf80Q9BSJ5 609 aa7.19□□□□□ -1.26
NPAS3-204ENST00000546849 TRIM5Q9C035 493 aa7.19□□□□□ -1.26
NPAS3-204ENST00000546849 EHD3Q9NZN3 535 aa7.19□□□□□ -1.26
NPAS3-204ENST00000546849 ZMYND8Q9ULU4 1186 aaPredicted RBP7.19□□□□□ -1.26
NPAS3-204ENST00000546849 CAPN11Q9UMQ6 739 aa7.19□□□□□ -1.26
NPAS3-204ENST00000546849 SNX14Q9Y5W7 946 aa7.19□□□□□ -1.26
NPAS3-204ENST00000546849 GABRB3P28472 473 aa7.18□□□□□ -1.26
NPAS3-204ENST00000546849 ZEB1P37275 1124 aaPredicted RBP7.18□□□□□ -1.26
NPAS3-204ENST00000546849 MPP3Q13368 585 aa7.18□□□□□ -1.26
NPAS3-204ENST00000546849 PUM1Q14671 1186 aaKnown RBP eCLIP7.18□□□□□ -1.26
NPAS3-204ENST00000546849 RAB30Q15771 203 aa7.18□□□□□ -1.26
NPAS3-204ENST00000546849 NBPF8Q3BBV2 869 aa7.18□□□□□ -1.26
NPAS3-204ENST00000546849 PLAC9Q5JTB6 97 aa7.18□□□□□ -1.26
NPAS3-204ENST00000546849 CCDC174Q6PII3 467 aa7.18□□□□□ -1.26
NPAS3-204ENST00000546849 Q6ZNX1 250 aa7.18□□□□□ -1.26
NPAS3-204ENST00000546849 DTX2Q86UW9 622 aa7.18□□□□□ -1.26
NPAS3-204ENST00000546849 GATAD2AQ86YP4 633 aa7.18□□□□□ -1.26
NPAS3-204ENST00000546849 CCDC28AQ8IWP9 274 aa7.18□□□□□ -1.26
NPAS3-204ENST00000546849 FSTL5Q8N475 847 aaPredicted RBP7.18□□□□□ -1.26
NPAS3-204ENST00000546849 GLIS1Q8NBF1 620 aa7.18□□□□□ -1.26
NPAS3-204ENST00000546849 GLG1Q92896 1179 aa7.18□□□□□ -1.26
NPAS3-204ENST00000546849 R3HDM4Q96D70 268 aa7.18□□□□□ -1.26
NPAS3-204ENST00000546849 NECTIN3Q9NQS3 549 aa7.18□□□□□ -1.26
NPAS3-204ENST00000546849 KLC4Q9NSK0 619 aa7.18□□□□□ -1.26
NPAS3-204ENST00000546849 LRFN1Q9P244 771 aa7.18□□□□□ -1.26
NPAS3-204ENST00000546849 MYRFQ9Y2G1 1151 aa7.18□□□□□ -1.26
NPAS3-204ENST00000546849 PIP5K1BO14986 540 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 PROM1O43490 865 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 SRGAP2BP0DMP2 458 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 CD19P15391 556 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 EGR1P18146 543 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 UQCRC1P31930 480 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 CHKAP35790 457 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 LIPAP38571 399 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 FOLR3P41439 243 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 GATMP50440 423 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 CLCN2P51788 898 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 HNRNPMP52272 730 aaKnown RBP eCLIP7.17□□□□□ -1.26
NPAS3-204ENST00000546849 TPTEP56180 551 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 MRPS35P82673 323 aaKnown RBP7.17□□□□□ -1.26
NPAS3-204ENST00000546849 NSUN2Q08J23 767 aaKnown RBP eCLIP7.17□□□□□ -1.264e-6■■■■□ 26.5
NPAS3-204ENST00000546849 SCAPQ12770 1279 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 BMPR2Q13873 1038 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 MAPKAPK3Q16644 382 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 TREML2Q5T2D2 321 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 MANEALQ5VSG8 457 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 KAZNQ674X7 775 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 USP49Q70CQ1 688 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 USP51Q70EK9 711 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 RAB11FIP4Q86YS3 637 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 LRRC71Q8N4P6 559 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 TFAP2BQ92481 460 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 C18orf8Q96DM3 657 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 ZBTB45Q96K62 511 aaPredicted RBP7.17□□□□□ -1.26
NPAS3-204ENST00000546849 PRPF18Q99633 342 aaKnown RBP7.17□□□□□ -1.26
NPAS3-204ENST00000546849 ZNF747Q9BV97 191 aa7.17□□□□□ -1.26
NPAS3-204ENST00000546849 A0A087WZ62 844 aa7.16□□□□□ -1.26
NPAS3-204ENST00000546849 A1L4Q6 167 aa7.16□□□□□ -1.26
NPAS3-204ENST00000546849 MPPED1O15442 326 aa7.16□□□□□ -1.26
NPAS3-204ENST00000546849 NBNO60934 754 aa7.16□□□□□ -1.26
NPAS3-204ENST00000546849 ONECUT2O95948 504 aa7.16□□□□□ -1.26
NPAS3-204ENST00000546849 CSTBP04080 98 aaKnown RBP7.16□□□□□ -1.26
NPAS3-204ENST00000546849 FESP07332 822 aa7.16□□□□□ -1.26
NPAS3-204ENST00000546849 RBL1P28749 1068 aa7.16□□□□□ -1.26
NPAS3-204ENST00000546849 ATXN1P54253 815 aaKnown RBP7.16□□□□□ -1.26
NPAS3-204ENST00000546849 TAP1Q03518 808 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms