RNA–Protein interactions for RNA: ENST00000546417.5

BRF1-207, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-207ENST00000546417 C12orf40Q86WS4 652 aa12.88□□□□□ -0.35
BRF1-207ENST00000546417 IGSF22Q8N9C0 903 aa12.88□□□□□ -0.35
BRF1-207ENST00000546417 PIP4K2CQ8TBX8 421 aa12.88□□□□□ -0.35
BRF1-207ENST00000546417 DCBLD2Q96PD2 775 aa12.88□□□□□ -0.35
BRF1-207ENST00000546417 E9PAM4 449 aa12.87□□□□□ -0.35
BRF1-207ENST00000546417 CAPN9O14815 690 aa12.87□□□□□ -0.35
BRF1-207ENST00000546417 DKK1O94907 266 aa12.87□□□□□ -0.35
BRF1-207ENST00000546417 PIGRP01833 764 aa12.87□□□□□ -0.35
BRF1-207ENST00000546417 PNPLA4P41247 253 aa12.87□□□□□ -0.35
BRF1-207ENST00000546417 NCKAP1LP55160 1127 aa12.87□□□□□ -0.35
BRF1-207ENST00000546417 SLC7A9P82251 487 aa12.87□□□□□ -0.35
BRF1-207ENST00000546417 MYL7Q01449 175 aa12.87□□□□□ -0.35
BRF1-207ENST00000546417 CAMK2BQ13554 666 aa12.87□□□□□ -0.35
BRF1-207ENST00000546417 ANKRD1Q15327 319 aa12.87□□□□□ -0.35
BRF1-207ENST00000546417 INTS6LQ5JSJ4 861 aaKnown RBP12.87□□□□□ -0.35
BRF1-207ENST00000546417 TTC38Q5R3I4 469 aa12.87□□□□□ -0.35
BRF1-207ENST00000546417 SPATA2LQ8IUW3 424 aaPredicted RBP12.87□□□□□ -0.35
BRF1-207ENST00000546417 SCN4BQ8IWT1 228 aa12.87□□□□□ -0.35
BRF1-207ENST00000546417 KCNN1Q92952 543 aa12.87□□□□□ -0.35
BRF1-207ENST00000546417 FUBP3Q96I24 572 aaKnown RBP eCLIP12.87□□□□□ -0.35
BRF1-207ENST00000546417 ZNF560Q96MR9 790 aa12.87□□□□□ -0.35
BRF1-207ENST00000546417 TOR4AQ9NXH8 423 aa12.87□□□□□ -0.35
BRF1-207ENST00000546417 DDX43Q9NXZ2 648 aaKnown RBP12.87□□□□□ -0.35
BRF1-207ENST00000546417 TRPM5Q9NZQ8 1165 aa12.87□□□□□ -0.35
BRF1-207ENST00000546417 KCND2Q9NZV8 630 aa12.87□□□□□ -0.35
BRF1-207ENST00000546417 TBC1D14Q9P2M4 693 aa12.87□□□□□ -0.35
BRF1-207ENST00000546417 GTF3C4Q9UKN8 822 aa12.87□□□□□ -0.35
BRF1-207ENST00000546417 CYP8B1Q9UNU6 501 aa12.87□□□□□ -0.35
BRF1-207ENST00000546417 A0A1B0GTW7 788 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 CAPN8A6NHC0 703 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 CYSRT1A8MQ03 144 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 J3QKU1 62 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 FLRT2O43155 660 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 HUS1O60921 280 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 CER1O95813 267 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 ATXN1LP0C7T5 689 aaKnown RBP12.86□□□□□ -0.35
BRF1-207ENST00000546417 NTSR1P30989 418 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 GAD2Q05329 585 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 BTBD8Q5XKL5 378 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 LARP1BQ659C4 914 aaKnown RBP12.86□□□□□ -0.35
BRF1-207ENST00000546417 SDE2Q6IQ49 451 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 KCNK18Q7Z418 384 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 DDX42Q86XP3 938 aaKnown RBP eCLIP12.86□□□□□ -0.35
BRF1-207ENST00000546417 PHTF2Q8N3S3 785 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 ZNF843Q8N446 348 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 PDCL2Q8N4E4 241 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 C4orf32Q8N8J7 132 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 NECAB1Q8N987 351 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 NSUN7Q8NE18 718 aaKnown RBP12.86□□□□□ -0.35
BRF1-207ENST00000546417 BAHD1Q8TBE0 780 aaPredicted RBP12.86□□□□□ -0.35
BRF1-207ENST00000546417 RHBDD1Q8TEB9 315 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 CEP295NLQ96MC4 621 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 PRDM16Q9HAZ2 1276 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 TM7SF3Q9NS93 570 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 PPP4R2Q9NY27 417 aa12.86□□□□□ -0.35
BRF1-207ENST00000546417 A0A1W2PQF6 199 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 NDUFV2P19404 249 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 ACAT1P24752 427 aaKnown RBP12.85□□□□□ -0.35
BRF1-207ENST00000546417 MAOBP27338 520 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 MATKP42679 507 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 MAGEA11P43364 429 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 PPP3CCP48454 512 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 TRAPPC10P48553 1259 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 ACOT2P49753 483 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 LY6G5CQ5SRR4 150 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 IL27RAQ6UWB1 636 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 DBX2Q6ZNG2 339 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 LRRC69Q6ZNQ3 347 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 CENPQQ7L2Z9 268 aaPredicted RBP12.85□□□□□ -0.35
BRF1-207ENST00000546417 MARCH9Q86YJ5 346 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 TMEM86AQ8N2M4 240 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 KCTD17Q8N5Z5 321 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 SYT2Q8N9I0 419 aaPredicted RBP12.85□□□□□ -0.35
BRF1-207ENST00000546417 GTF3C6Q969F1 213 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 SPATA17Q96L03 361 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 PKMYT1Q99640 499 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 RNF38Q9H0F5 515 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 FOXP1Q9H334 677 aaPredicted RBP12.85□□□□□ -0.35
BRF1-207ENST00000546417 PRORYQ9H606 182 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 GAREM1Q9H706 876 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 EHD2Q9NZN4 543 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 DEC1Q9P2X7 70 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 NFE2L3Q9Y4A8 694 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 PCDHGB2Q9Y5G2 931 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 CPQQ9Y646 472 aa12.85□□□□□ -0.35
BRF1-207ENST00000546417 GOLGA8CPA6NN73 597 aa12.84□□□□□ -0.35
BRF1-207ENST00000546417 PP2D1A8MPX8 630 aa12.84□□□□□ -0.35
BRF1-207ENST00000546417 CILPO75339 1184 aa12.84□□□□□ -0.35
BRF1-207ENST00000546417 HLA-EP13747 358 aa12.84□□□□□ -0.35
BRF1-207ENST00000546417 PCSK1P29120 753 aa12.84□□□□□ -0.35
BRF1-207ENST00000546417 WASP42768 502 aa12.84□□□□□ -0.35
BRF1-207ENST00000546417 LHX1P48742 406 aa12.84□□□□□ -0.35
BRF1-207ENST00000546417 POU5F1Q01860 360 aaKnown RBP12.84□□□□□ -0.35
BRF1-207ENST00000546417 GUCY1B3Q02153 619 aa12.84□□□□□ -0.35
BRF1-207ENST00000546417 SUZ12Q15022 739 aaKnown RBP12.84□□□□□ -0.35
BRF1-207ENST00000546417 SMAD1Q15797 465 aaKnown RBP12.84□□□□□ -0.35
BRF1-207ENST00000546417 C10orf76Q5T2E6 689 aa12.84□□□□□ -0.35
BRF1-207ENST00000546417 C4orf50Q6ZRC1 276 aa12.84□□□□□ -0.35
BRF1-207ENST00000546417 DENND5BQ6ZUT9 1274 aa12.84□□□□□ -0.35
BRF1-207ENST00000546417 NT5DC4Q86YG4 428 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms