RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 PIGZQ86VD9 579 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 RFX6Q8HWS3 928 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 FUKQ8N0W3 1084 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 B3GALNT2Q8NCR0 500 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 GLT1D1Q96MS3 346 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 PGLYRP2Q96PD5 576 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 PLEKHA5Q9HAU0 1116 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 ZDHHC18Q9NUE0 388 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 DNAJB4Q9UDY4 337 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 MYO18AQ92614 2054 aaKnown RBP12.55□□□□□ -0.4
CCDC38-202ENST00000546386 PRRC2BQ5JSZ5 2229 aaKnown RBP12.55□□□□□ -0.4
CCDC38-202ENST00000546386 GOLGA6CA6NDK9 693 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 SOAT2O75908 522 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 HMGCRP04035 888 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 GOLGA6DP0CG33 693 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 CHRNA3P32297 505 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 SLC1A1P43005 524 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 ARPP19P56211 112 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 KLF1Q13351 362 aaPredicted RBP12.55□□□□□ -0.4
CCDC38-202ENST00000546386 NNTQ13423 1086 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 P3H1Q32P28 736 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 DCAF6Q58WW2 860 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 CCSAPQ6IQ19 270 aaPredicted RBP12.55□□□□□ -0.4
CCDC38-202ENST00000546386 FAM117BQ6P1L5 589 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 ACTL9Q8TC94 416 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 IPO4Q8TEX9 1081 aaKnown RBP12.55□□□□□ -0.4
CCDC38-202ENST00000546386 SLC35F5Q8WV83 523 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 VCPIP1Q96JH7 1222 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 DEFB118Q96PH6 123 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 PPP1R10Q96QC0 940 aaKnown RBP12.55□□□□□ -0.4
CCDC38-202ENST00000546386 STARD7Q9NQZ5 370 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 GOLGA6AQ9NYA3 693 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 TBK1Q9UHD2 729 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 A0A0C4DFX4 3053 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 ANKRD65E5RJM6 399 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 RNF8O76064 485 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 USP17L7P0C7H9 530 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 CKBP12277 381 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 CDKN2BP42772 138 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 OTUD4Q01804 1114 aaKnown RBP12.54□□□□□ -0.4
CCDC38-202ENST00000546386 GPS2Q13227 327 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 FASTKD3Q14CZ7 662 aaKnown RBP12.54□□□□□ -0.4
CCDC38-202ENST00000546386 KYNUQ16719 465 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 FOXR1Q6PIV2 292 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 PAQR9Q6ZVX9 377 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 DEFB128Q7Z7B8 93 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 RNF180Q86T96 592 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 TP53INP2Q8IXH6 220 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 FAM71DQ8N9W8 422 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 PCED1BQ96HM7 432 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 PPP1R12CQ9BZL4 782 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 FAM107BQ9H098 131 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 LHX5Q9H2C1 402 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 CYP3A43Q9HB55 503 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 CRTAC1Q9NQ79 661 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 KRT82Q9NSB4 513 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 CTNNAL1Q9UBT7 734 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 SNX10Q9Y5X0 201 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 SCN10AQ9Y5Y9 1956 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 BDNFP23560 247 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 PGFP49763 221 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 IFFO1Q0D2I5 559 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 OLFML1Q6UWY5 402 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 IQCKQ8N0W5 287 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 ZNF784Q8NCA9 323 aaPredicted RBP12.54□□□□□ -0.4
CCDC38-202ENST00000546386 SCAMP5Q8TAC9 235 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 EPS8L3Q8TE67 593 aaKnown RBP12.54□□□□□ -0.4
CCDC38-202ENST00000546386 UNC93B1Q9H1C4 597 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 TMLHEQ9NVH6 421 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 Q9Y3F1 56 aa12.54□□□□□ -0.4
CCDC38-202ENST00000546386 A0A1W2PQ45 241 aaPredicted RBP12.53□□□□□ -0.4
CCDC38-202ENST00000546386 A0A1W2PQY0 241 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 NRP1O14786 923 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 PTPN1P18031 435 aaKnown RBP12.53□□□□□ -0.4
CCDC38-202ENST00000546386 HOXC8P31273 242 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 CDH5P33151 784 aaPredicted RBP12.53□□□□□ -0.4
CCDC38-202ENST00000546386 ARSEP51690 589 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 GPS1Q13098 491 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 BYSLQ13895 437 aaKnown RBP12.53□□□□□ -0.4
CCDC38-202ENST00000546386 PIGHQ14442 188 aaPredicted RBP12.53□□□□□ -0.4
CCDC38-202ENST00000546386 TCEAL1Q15170 157 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 TFDP3Q5H9I0 405 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 LHX8Q68G74 356 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 ZNF365Q70YC5 407 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 KATNAL2Q8IYT4 538 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 CCDC185Q8N715 623 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 KLHDC9Q8NEP7 349 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 RAB17Q9H0T7 212 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 NAALADL1Q9UQQ1 740 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 hCG_1818297A0A087WSY0 165 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 C3orf70A6NLC5 250 aaPredicted RBP12.53□□□□□ -0.4
CCDC38-202ENST00000546386 C2CD4BA6NLJ0 364 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 DDHD2O94830 711 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 CD4P01730 458 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 GPD1P21695 349 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 KDELR1P24390 212 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 GUCY1A3Q02108 690 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 LONRF1Q17RB8 773 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 LRRTM3Q86VH5 581 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 UNC45BQ8IWX7 931 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms