RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 NOMO3P69849 1222 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 TFDP3Q5H9I0 405 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 THEMIS2Q5TEJ8 643 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 JADE1Q6IE81 842 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 POLNQ7Z5Q5 900 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 NDUFAF2Q8N183 169 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 ATP11CQ8NB49 1132 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 TMEM109Q9BVC6 243 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 TRIM55Q9BYV6 548 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 CCDC134Q9H6E4 229 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 ARHGEF3Q9NR81 526 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 ANKRD12Q6UB98 2062 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 LTBP4Q8N2S1 1624 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 SPDYE16A6NNV3 312 aaPredicted RBP10.21□□□□□ -0.78
TRAF1-203ENST00000546084 H3BRJ5 948 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 MED7O43513 233 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 MYL3P08590 195 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 ADCYAP1R1P41586 468 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 HSD17B4P51659 736 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 POLE2P56282 527 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 TMEM132DQ14C87 1099 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 NUDCD3Q8IVD9 361 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 PPFIBP2Q8ND30 876 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 NLGN2Q8NFZ4 835 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 LMO3Q8TAP4 145 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 PGBD4Q96DM1 585 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 TSNARE1Q96NA8 513 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 SPATC1LQ9H0A9 340 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 ZNF395Q9H8N7 513 aaPredicted RBP10.21□□□□□ -0.78
TRAF1-203ENST00000546084 AAASQ9NRG9 546 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 SNTG2Q9NY99 539 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 SLC17A7Q9P2U7 560 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 SLC17A6Q9P2U8 582 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 NKX1-2Q9UD57 310 aaPredicted RBP10.21□□□□□ -0.78
TRAF1-203ENST00000546084 USP18Q9UMW8 372 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 CCDC88AQ3V6T2 1871 aa10.21□□□□□ -0.78
TRAF1-203ENST00000546084 KBTBD13C9JR72 458 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 BHMG1C9JSJ3 638 aaPredicted RBP10.2□□□□□ -0.78
TRAF1-203ENST00000546084 RGL2O15211 777 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 CYP2B6P20813 491 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 GMPRP36959 345 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 ARL4AP40617 200 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 SLC1A1P43005 524 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 GLRBP48167 497 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 CAV1Q03135 178 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 MAP1SQ66K74 1059 aaPredicted RBP10.2□□□□□ -0.78
TRAF1-203ENST00000546084 ENOSF1Q7L5Y1 443 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 RNF148Q8N7C7 305 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 CCNYL1Q8N7R7 359 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 FAM172AQ8WUF8 416 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 MBOAT7Q96N66 472 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 CPXM1Q96SM3 734 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 FERMT1Q9BQL6 677 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 TBC1D10AQ9BXI6 508 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 ATXN3LQ9H3M9 355 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 RNPEPQ9H4A4 650 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 ZFATQ9P243 1243 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 ZMYND8Q9ULU4 1186 aaPredicted RBP10.2□□□□□ -0.78
TRAF1-203ENST00000546084 P4HA2O15460 535 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 HAUS5O94927 633 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 HMGB2P26583 209 aaKnown RBP10.2□□□□□ -0.78
TRAF1-203ENST00000546084 IREB2P48200 963 aaKnown RBP10.2□□□□□ -0.78
TRAF1-203ENST00000546084 YWHAEP62258 255 aaKnown RBP10.2□□□□□ -0.78
TRAF1-203ENST00000546084 FAAP100Q0VG06 881 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 KBTBD12Q3ZCT8 623 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 PTPN20Q4JDL3 420 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 GET4Q7L5D6 327 aaPredicted RBP10.2□□□□□ -0.78
TRAF1-203ENST00000546084 FAM83AQ86UY5 434 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 MAB21L3Q8N8X9 362 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 TTC8Q8TAM2 541 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 TMC2Q8TDI7 906 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 THTPAQ9BU02 230 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 TSSK1BQ9BXA7 367 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 ASNSD1Q9NWL6 643 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 SLC5A4Q9NY91 659 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 DLGAP2Q9P1A6 1054 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 MEI4A8MW99 385 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 ATP5HO75947 161 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 TOP3BO95985 862 aaKnown RBP10.2□□□□□ -0.78
TRAF1-203ENST00000546084 KRT7P08729 469 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 KCNA2P16389 499 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 CALB2P22676 271 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 RBL1P28749 1068 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 NOVP48745 357 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 TTLL4Q14679 1199 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 SLC1A5Q15758 541 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 TMCO4Q5TGY1 634 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 TMEM154Q6P9G4 183 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 CTU1Q7Z7A3 348 aaKnown RBP10.2□□□□□ -0.78
TRAF1-203ENST00000546084 SIX6OS1Q8N1H7 587 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 AGGF1Q8N302 714 aaeCLIP10.2□□□□□ -0.78
TRAF1-203ENST00000546084 EDEM1Q92611 657 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 RNPEPL1Q9HAU8 725 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 BTBD7Q9P203 1132 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 TSPAN16Q9UKR8 245 aa10.2□□□□□ -0.78
TRAF1-203ENST00000546084 TCRBV7S3A2A0A539 114 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 SCAMP3O14828 347 aaKnown RBP10.19□□□□□ -0.78
TRAF1-203ENST00000546084 FSCN2O14926 492 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 ADCY3O60266 1144 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 CIB2O75838 187 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms