RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 RHOT1Q8IXI2 618 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 APOL5Q9BWW9 433 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 NFKBIZQ9BYH8 718 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 DDIT4Q9NX09 232 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 SMPD4Q9NXE4 827 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 DPP3Q9NY33 737 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 CEP72Q9P209 647 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 GGT7Q9UJ14 662 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 TTC7AQ9ULT0 858 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-218ENST00000545889 ORC6Q9Y5N6 252 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 KIAA0100Q14667 2235 aaKnown RBP8.95□□□□□ -0.98
CLIP1-218ENST00000545889 TISP43B9A030 160 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 CYP26A1O43174 497 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 VCLP18206 1134 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 MDM2Q00987 491 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-218ENST00000545889 SGCGQ13326 291 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 GLE1Q53GS7 698 aaKnown RBP8.95□□□□□ -0.98
CLIP1-218ENST00000545889 CELF3Q5SZQ8 465 aaKnown RBP8.95□□□□□ -0.98
CLIP1-218ENST00000545889 RD3Q7Z3Z2 195 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 CACUL1Q86Y37 369 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 ATP11CQ8NB49 1132 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 DRAXINQ8NBI3 349 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-218ENST00000545889 RBBP8NLQ8NC74 664 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-218ENST00000545889 CCDC197Q8NCU1 140 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 ARL8AQ96BM9 186 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 RNPC3Q96LT9 517 aaKnown RBP8.95□□□□□ -0.98
CLIP1-218ENST00000545889 ADAM2Q99965 735 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 NUP85Q9BW27 656 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 UBE2OQ9C0C9 1292 aaKnown RBP8.95□□□□□ -0.98
CLIP1-218ENST00000545889 NIF3L1Q9GZT8 377 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 IKZF4Q9H2S9 585 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 C17orf75Q9HAS0 396 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 SCUBE2Q9NQ36 999 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-218ENST00000545889 SCOCQ9UIL1 159 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 VPS28Q9UK41 221 aa8.95□□□□□ -0.98
CLIP1-218ENST00000545889 MRPS23Q9Y3D9 190 aaKnown RBP8.95□□□□□ -0.98
CLIP1-218ENST00000545889 CASZ1Q86V15 1759 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 GOLGB1Q14789 3259 aaKnown RBP8.94□□□□□ -0.98
CLIP1-218ENST00000545889 SLC12A8A0AV02 714 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 TBC1D3BA6NDS4 549 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 HLA-DRAP01903 254 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 FGGP02679 453 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 FGFR4P22455 802 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 EPHB2P29323 1055 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 KLK7P49862 253 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 PDE1CQ14123 709 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-218ENST00000545889 OVOS1Q6IE37 1185 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 SH3RF1Q7Z6J0 888 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 IFNL1Q8IU54 200 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 MORC4Q8TE76 937 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 ATP8B4Q8TF62 1192 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 USP13Q92995 863 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-218ENST00000545889 TATDN2Q93075 761 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 CCDC124Q96CT7 223 aaKnown RBP8.94□□□□□ -0.98
CLIP1-218ENST00000545889 MRPL17Q9NRX2 175 aaKnown RBP8.94□□□□□ -0.98
CLIP1-218ENST00000545889 CRLS1Q9UJA2 301 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 TTC26A0AVF1 554 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 ENDOD1O94919 500 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 HSPA4LO95757 839 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 LGALS2P05162 132 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 GJB1P08034 283 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 SARSP49591 514 aaKnown RBP8.94□□□□□ -0.98
CLIP1-218ENST00000545889 ROR2Q01974 943 aaKnown RBP8.94□□□□□ -0.98
CLIP1-218ENST00000545889 SMAD1Q15797 465 aaKnown RBP8.94□□□□□ -0.98
CLIP1-218ENST00000545889 CCL14Q16627 93 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 PRR23CQ6ZRP0 262 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 CARNMT1Q8N4J0 409 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 CD99L2Q8TCZ2 262 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 GIPC2Q8TF65 315 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 LENG9Q96B70 501 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 PHACTR1Q9C0D0 580 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 OSGEPL1Q9H4B0 414 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 DLGAP2Q9P1A6 1054 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 RNF14Q9UBS8 474 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 C15orf41Q9Y2V0 281 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 COL4A5P29400 1685 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 EEF2KO00418 725 aaKnown RBP8.94□□□□□ -0.98
CLIP1-218ENST00000545889 IGF2BP3O00425 579 aaKnown RBP eCLIP8.94□□□□□ -0.98
CLIP1-218ENST00000545889 APOL1O14791 398 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 STX7O15400 261 aaKnown RBP8.94□□□□□ -0.98
CLIP1-218ENST00000545889 AHCYL1O43865 530 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 ROR1Q01973 937 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 PLD1Q13393 1074 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 TMEM154Q6P9G4 183 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 ZNF720Q7Z2F6 126 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 RASAL3Q86YV0 1011 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 TMCO5AQ8N6Q1 288 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 EPB41L5Q9HCM4 733 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 AGPAT3Q9NRZ7 376 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 KLHL11Q9NVR0 708 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 DDX56Q9NY93 547 aaKnown RBP8.94□□□□□ -0.98
CLIP1-218ENST00000545889 UBAP1Q9NZ09 502 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 TBX20Q9UMR3 447 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 ZNF232Q9UNY5 417 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 PKP3Q9Y446 797 aa8.94□□□□□ -0.98
CLIP1-218ENST00000545889 TNS1Q9HBL0 1735 aaKnown RBP8.94□□□□□ -0.98
CLIP1-218ENST00000545889 FAM237AA0A1B0GTK4 181 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 GMNCA6NCL1 334 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 TLR2O60603 784 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms