RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 NKD1Q969G9 470 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 MS4A14Q96JA4 679 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 FERD3LQ96RJ6 166 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 NUDCD1Q96RS6 583 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 YIPF2Q9BWQ6 316 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 NT5C1AQ9BXI3 368 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 BRD8Q9H0E9 1235 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 UNC45AQ9H3U1 944 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 NMRK1Q9NWW6 199 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 SMARCAL1Q9NZC9 954 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 LNPEPQ9UIQ6 1025 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 BARX2Q9UMQ3 279 aaPredicted RBP4.85□□□□□ -1.63
CNGA1-209ENST00000544810 SSX2IPQ9Y2D8 614 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 STK38LQ9Y2H1 464 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 SIK3Q9Y2K2 1263 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 MYH4Q9Y623 1939 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 NCOR2Q9Y618 2525 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 CACNA1GO43497 2377 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 WDFY4Q6ZS81 3184 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 BAHCC1Q9P281 2608 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 FAM187AA6NFU0 413 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 CETN3O15182 167 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 RGS16O15492 202 aaPredicted RBP4.85□□□□□ -1.63
CNGA1-209ENST00000544810 MBD4O95243 580 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 ZIC2O95409 532 aaPredicted RBP4.85□□□□□ -1.63
CNGA1-209ENST00000544810 HARSP12081 509 aaKnown RBP4.85□□□□□ -1.63
CNGA1-209ENST00000544810 XBP1P17861 261 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 CCNE1P24864 410 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 ANXA13P27216 316 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 SMARCA1P28370 1054 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 CBX3Q13185 183 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 ADAM15Q13444 863 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 PWP1Q13610 501 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 SPIDRQ14159 915 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 IKBKEQ14164 716 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 BTG3Q14201 252 aaPredicted RBP4.85□□□□□ -1.63
CNGA1-209ENST00000544810 ACAP1Q15027 740 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 LIN52Q52LA3 116 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 MIIPQ5JXC2 388 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 ARL6IP4Q66PJ3 421 aaKnown RBP4.85□□□□□ -1.63
CNGA1-209ENST00000544810 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.85□□□□□ -1.63
CNGA1-209ENST00000544810 EXOC3L1Q86VI1 746 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 FBXO16Q8IX29 292 aaPredicted RBP4.85□□□□□ -1.63
CNGA1-209ENST00000544810 KIAA2013Q8IYS2 634 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 CPXCR1Q8N123 301 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 FAM13CQ8NE31 585 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 IGDCC4Q8TDY8 1250 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 CKAP2Q8WWK9 683 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 EPSTI1Q96J88 318 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 HHIPQ96QV1 700 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 FMO2Q99518 471 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 PRMT1Q99873 361 aaKnown RBP4.85□□□□□ -1.63
CNGA1-209ENST00000544810 LMAN2LQ9H0V9 348 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 NEUROG2Q9H2A3 272 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 CUEDC2Q9H467 287 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 RAVER2Q9HCJ3 691 aaKnown RBP4.85□□□□□ -1.63
CNGA1-209ENST00000544810 TIMMDC1Q9NPL8 285 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 NLRC4Q9NPP4 1024 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.85□□□□□ -1.63
CNGA1-209ENST00000544810 PTTG2Q9NZH5 202 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 ZNF212Q9UDV6 495 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 DNAJB4Q9UDY4 337 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 SALL4Q9UJQ4 1053 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 TMEM98Q9Y2Y6 226 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 UTP11Q9Y3A2 253 aaKnown RBP4.85□□□□□ -1.63
CNGA1-209ENST00000544810 MSRB2Q9Y3D2 182 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 PRKAB1Q9Y478 270 aa4.85□□□□□ -1.63
CNGA1-209ENST00000544810 ZNFX1Q9P2E3 1918 aaKnown RBP4.85□□□□□ -1.63
CNGA1-209ENST00000544810 GVINP1Q7Z2Y8 2422 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 CCDC162PA2VCL2 907 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 GREM1O60565 184 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 PFDN1O60925 122 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 ATP9AO75110 1047 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 DCTN3O75935 186 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 AMHP03971 560 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 ITGA2BP08514 1039 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 EEF2P13639 858 aaKnown RBP4.84□□□□□ -1.63
CNGA1-209ENST00000544810 LONP1P36776 959 aaKnown RBP4.84□□□□□ -1.63
CNGA1-209ENST00000544810 NDUFV1P49821 464 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 CPT1AP50416 773 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 BPIFB4P59827 614 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 POU5F1Q01860 360 aaKnown RBP4.84□□□□□ -1.63
CNGA1-209ENST00000544810 AP1B1Q10567 949 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 RCN2Q14257 317 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 RPS6KA1Q15418 735 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 DUSP28Q4G0W2 176 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 DENND2CQ68D51 928 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 PDXDC1Q6P996 788 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 ARMCX6Q7L4S7 300 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 SMRP1Q8NCR6 262 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 PPFIBP2Q8ND30 876 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 ERMNQ8TAM6 284 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 PIP4K2CQ8TBX8 421 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 LRRC8CQ8TDW0 803 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 PHKBQ93100 1093 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 OSBP2Q969R2 916 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 RUNDC3BQ96NL0 473 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 SELENOSQ9BQE4 189 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 TUBB6Q9BUF5 446 aa4.84□□□□□ -1.63
CNGA1-209ENST00000544810 PHF7Q9BWX1 381 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms