RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 SFXN1Q9H9B4 322 aa13.82□□□□□ -0.2
DDX11-227ENST00000544652 ZNHIT6Q9NWK9 470 aaKnown RBP13.82□□□□□ -0.2
DDX11-227ENST00000544652 COMMD8Q9NX08 183 aa13.82□□□□□ -0.2
DDX11-227ENST00000544652 IL37Q9NZH6 218 aa13.82□□□□□ -0.2
DDX11-227ENST00000544652 CYTH4Q9UIA0 394 aa13.82□□□□□ -0.2
DDX11-227ENST00000544652 ASB3Q9Y575 518 aa13.82□□□□□ -0.2
DDX11-227ENST00000544652 FAM92AA1XBS5 289 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 DDX3XO00571 662 aaKnown RBP eCLIP13.81□□□□□ -0.2
DDX11-227ENST00000544652 TBX10O75333 385 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 GABBR2O75899 941 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 LRG1P02750 347 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 TNFAIP3P21580 790 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 LTBRP36941 435 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 CENPCQ03188 943 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 TDRD12Q587J7 1177 aaKnown RBP13.81□□□□□ -0.2
DDX11-227ENST00000544652 PMF1Q6P1K2 205 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 SYCE2Q6PIF2 218 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 CYP26C1Q6V0L0 522 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 CCDC186Q7Z3E2 898 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 TMEM139Q8IV31 216 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 PASD1Q8IV76 773 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 NUP93Q8N1F7 819 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 PSMG2Q969U7 264 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 ZNF707Q96C28 371 aaPredicted RBP13.81□□□□□ -0.2
DDX11-227ENST00000544652 MYRFLQ96LU7 910 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 TTLL2Q9BWV7 592 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 PRKD2Q9BZL6 878 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 CLEC1BQ9P126 229 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 NENFQ9UMX5 172 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 CEP83Q9Y592 693 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 USP3Q9Y6I4 520 aa13.81□□□□□ -0.2
DDX11-227ENST00000544652 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.8□□□□□ -0.2
DDX11-227ENST00000544652 CCDC195A0A1B0GUA6 201 aa13.8□□□□□ -0.2
DDX11-227ENST00000544652 SLC38A8A6NNN8 435 aa13.8□□□□□ -0.2
DDX11-227ENST00000544652 RFPL2O75678 378 aa13.8□□□□□ -0.2
DDX11-227ENST00000544652 CSH1P0DML2 217 aa13.8□□□□□ -0.2
DDX11-227ENST00000544652 CSH2P0DML3 217 aa13.8□□□□□ -0.2
DDX11-227ENST00000544652 GZMAP12544 262 aa13.8□□□□□ -0.2
DDX11-227ENST00000544652 HMGA1P17096 107 aaKnown RBP13.8□□□□□ -0.2
DDX11-227ENST00000544652 HOXB8P17481 243 aaPredicted RBP13.8□□□□□ -0.2
DDX11-227ENST00000544652 EIF4A3P38919 411 aaKnown RBP13.8□□□□□ -0.2
DDX11-227ENST00000544652 KIF11P52732 1056 aa13.8□□□□□ -0.2
DDX11-227ENST00000544652 EPHB3P54753 998 aa13.8□□□□□ -0.2
DDX11-227ENST00000544652 DLX2Q07687 328 aaPredicted RBP13.8□□□□□ -0.2
DDX11-227ENST00000544652 PDCLQ13371 301 aa13.8□□□□□ -0.2
DDX11-227ENST00000544652 VEPH1Q14D04 833 aa13.8□□□□□ -0.2
DDX11-227ENST00000544652 CLEC16AQ2KHT3 1053 aa13.8□□□□□ -0.2
DDX11-227ENST00000544652 SDHAF4Q5VUM1 108 aa13.8□□□□□ -0.2
DDX11-227ENST00000544652 DENND5BQ6ZUT9 1274 aa13.8□□□□□ -0.2
DDX11-227ENST00000544652 GPRIN1Q7Z2K8 1008 aa13.8□□□□□ -0.2
DDX11-227ENST00000544652 TMEM110Q86TL2 294 aa13.8□□□□□ -0.2
DDX11-227ENST00000544652 ITIH5Q86UX2 942 aa13.8□□□□□ -0.2
DDX11-227ENST00000544652 SCML4Q8N228 414 aa13.8□□□□□ -0.2
DDX11-227ENST00000544652 C1orf131Q8NDD1 294 aaKnown RBP13.8□□□□□ -0.2
DDX11-227ENST00000544652 TRMT2BQ96GJ1 504 aaKnown RBP13.8□□□□□ -0.2
DDX11-227ENST00000544652 MSLNLQ96KJ4 702 aa13.8□□□□□ -0.2
DDX11-227ENST00000544652 LRRC3Q9BY71 257 aa13.8□□□□□ -0.2
DDX11-227ENST00000544652 PDCL3Q9H2J4 239 aa13.8□□□□□ -0.2
DDX11-227ENST00000544652 NHEJ1Q9H9Q4 299 aaPredicted RBP13.8□□□□□ -0.2
DDX11-227ENST00000544652 KIF26AQ9ULI4 1882 aaPredicted RBP13.8□□□□□ -0.2
DDX11-227ENST00000544652 SZT2Q5T011 3432 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 A0A087X0T9 212 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 RTN3O95197 1032 aaPredicted RBP13.79□□□□□ -0.2
DDX11-227ENST00000544652 FAM228BP0C875 321 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 ACADSBP45954 432 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 GABRB2P47870 512 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 SLC5A3P53794 718 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 EPHA5P54756 1037 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 SLC18A3Q16572 532 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 PTPN20Q4JDL3 420 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 PM20D1Q6GTS8 502 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 ACAD10Q6JQN1 1059 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 PPP1R2P3Q6NXS1 205 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 DNAJB7Q7Z6W7 309 aaPredicted RBP13.79□□□□□ -0.2
DDX11-227ENST00000544652 VPS36Q86VN1 386 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 PHF13Q86YI8 300 aaPredicted RBP13.79□□□□□ -0.2
DDX11-227ENST00000544652 TMC8Q8IU68 726 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 TMTC1Q8IUR5 882 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 GPR152Q8TDT2 470 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 GIPC2Q8TF65 315 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 ZNF512Q96ME7 567 aaPredicted RBP13.79□□□□□ -0.2
DDX11-227ENST00000544652 NOX5Q96PH1 765 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 PPP1R9BQ96SB3 815 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 CPXM1Q96SM3 734 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 ISCUQ9H1K1 167 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 S1PR5Q9H228 398 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 CLDND1Q9NY35 253 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 EHD2Q9NZN4 543 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 ADAMTS1Q9UHI8 967 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 NAGPAQ9UK23 515 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 NCANO14594 1321 aa13.79□□□□□ -0.2
DDX11-227ENST00000544652 CCL16O15467 120 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 XYLBO75191 536 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 LCA5LO95447 670 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 PTPN2P17706 415 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 MMP8P22894 467 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 RGS7P49802 495 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 TKTL1P51854 596 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 GSCP56915 257 aaPredicted RBP13.78□□□□□ -0.2
DDX11-227ENST00000544652 USP46P62068 366 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms