RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 LEMD2Q8NC56 503 aa15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 SCAMP5Q8TAC9 235 aa15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 NECTIN4Q96NY8 510 aa15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 NOX5Q96PH1 765 aa15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 GCNAQ96QF7 691 aa15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 LHX5Q9H2C1 402 aa15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 FBXO44Q9H4M3 255 aa15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 WDR6Q9NNW5 1121 aaKnown RBP15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 ST7Q9NRC1 585 aa15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 BRWD1Q9NSI6 2320 aa15.27■□□□□ 0.04
TNFRSF1A-216ENST00000543995 CLUHO75153 1309 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 GRXCR2A6NFK2 248 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ZNF197O14709 1029 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TNFRSF10BO14763 440 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 MFAP3LO75121 409 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 FGF19O95750 216 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 SKILP12757 684 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 FSHRP23945 695 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 GABRR2P28476 465 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TKTL1P51854 596 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 GOLGA8FQ08AF8 430 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 GOLGA8DPQ0D2H9 430 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TBX2Q13207 712 aaPredicted RBP15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 GSE1Q14687 1217 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 AAK1Q2M2I8 961 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 PUS10Q3MIT2 529 aaKnown RBP15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 E4F1Q66K89 784 aaPredicted RBP15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 PTCRAQ6ISU1 281 aaPredicted RBP15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 PMF1Q6P1K2 205 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 GET4Q7L5D6 327 aaPredicted RBP15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TMC8Q8IU68 726 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 SPC24Q8NBT2 197 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 C1orf131Q8NDD1 294 aaKnown RBP15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 OR8K1Q8NGG5 319 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 FBXO32Q969P5 355 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TRMT2BQ96GJ1 504 aaKnown RBP15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 MYRFLQ96LU7 910 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 SLITRK1Q96PX8 696 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 AGPAT1Q99943 283 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ATXN3LQ9H3M9 355 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 HAUS4Q9H6D7 363 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ZNHIT6Q9NWK9 470 aaKnown RBP15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 COMMD8Q9NX08 183 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 FAM50BQ9Y247 325 aa15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 MRPS23Q9Y3D9 190 aaKnown RBP15.27■□□□□ 0.03
TNFRSF1A-216ENST00000543995 NOTCH4Q99466 2003 aa15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 A0A1W2PRU2 124 aa15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 PIK3R2O00459 728 aa15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 LCP1P13796 627 aa15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 CHRNB2P17787 502 aa15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TNFAIP3P21580 790 aa15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 CDC25CP30307 473 aa15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 PRKCIP41743 596 aa15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 EPHA5P54756 1037 aa15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 FMO1Q01740 532 aa15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ADIGQ0VDE8 80 aa15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TAF10Q12962 218 aa15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 SIX6OS1Q8N1H7 587 aa15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TMEM35BQ8NCS4 154 aa15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 KCTD13Q8WZ19 329 aa15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 SUSD6Q92537 303 aa15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 LRRC3Q9BY71 257 aa15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 POMKQ9H5K3 350 aa15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ABHD10Q9NUJ1 306 aa15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 BZW2Q9Y6E2 419 aaKnown RBP15.26■□□□□ 0.03
TNFRSF1A-216ENST00000543995 FAM170AA1A519 330 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 GOLGA6L6A8MZA4 724 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 LSM8O95777 96 aaKnown RBP15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ABL1P00519 1130 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 SERPING1P05155 500 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 GJA1P17302 382 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ACADSBP45954 432 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 MRE11P49959 708 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 KIF11P52732 1056 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 PDCLQ13371 301 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 SLC5A9Q2M3M2 681 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TRIM72Q6ZMU5 477 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 GAREM2Q75VX8 874 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 WDTC1Q8N5D0 677 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ING5Q8WYH8 240 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TCEAL4Q96EI5 215 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 HSFY1Q96LI6 401 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 DNAJC7Q99615 494 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TTLL2Q9BWV7 592 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 SYNCQ9H7C4 482 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 CYTH4Q9UIA0 394 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 OBSL1O75147 1896 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 DENND4AQ7Z401 1863 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 DENND4CQ5VZ89 1909 aa15.25■□□□□ 0.03
TNFRSF1A-216ENST00000543995 USP17L7P0C7H9 530 aa15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 CDH5P33151 784 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 CCR2P41597 374 aa15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 SNX16P57768 344 aa15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ARHGAP15Q53QZ3 475 aa15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 RAB41Q5JT25 222 aa15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 PRSS36Q5K4E3 855 aa15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 NAA35Q5VZE5 725 aa15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ZNF571Q7Z3V5 609 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms