RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 RBBP8NLQ8NC74 664 aaPredicted RBP23.04■■□□□ 1.28
OTUB1-212ENST00000543988 CYP2S1Q96SQ9 504 aa23.04■■□□□ 1.28
OTUB1-212ENST00000543988 BRD9Q9H8M2 597 aa23.04■■□□□ 1.28
OTUB1-212ENST00000543988 UBE2TQ9NPD8 197 aaPredicted RBP23.04■■□□□ 1.28
OTUB1-212ENST00000543988 OBP2AQ9NY56 170 aa23.04■■□□□ 1.28
OTUB1-212ENST00000543988 TAB2Q9NYJ8 693 aa23.04■■□□□ 1.28
OTUB1-212ENST00000543988 FAM92AA1XBS5 289 aa23.03■■□□□ 1.28
OTUB1-212ENST00000543988 CKMP06732 381 aa23.03■■□□□ 1.28
OTUB1-212ENST00000543988 PON1P27169 355 aa23.03■■□□□ 1.28
OTUB1-212ENST00000543988 PFKPQ01813 784 aa23.03■■□□□ 1.28
OTUB1-212ENST00000543988 FCHO2Q0JRZ9 810 aa23.03■■□□□ 1.28
OTUB1-212ENST00000543988 TTC30AQ86WT1 665 aa23.03■■□□□ 1.28
OTUB1-212ENST00000543988 CELF5Q8N6W0 485 aaKnown RBP23.03■■□□□ 1.28
OTUB1-212ENST00000543988 ARL14EPQ8N8R7 260 aaPredicted RBP23.03■■□□□ 1.28
OTUB1-212ENST00000543988 RIN3Q8TB24 985 aa23.03■■□□□ 1.28
OTUB1-212ENST00000543988 TFAP2BQ92481 460 aa23.03■■□□□ 1.28
OTUB1-212ENST00000543988 MFSD1Q9H3U5 465 aa23.03■■□□□ 1.28
OTUB1-212ENST00000543988 PNPLA8Q9NP80 782 aa23.03■■□□□ 1.28
OTUB1-212ENST00000543988 FANCLQ9NW38 375 aa23.03■■□□□ 1.28
OTUB1-212ENST00000543988 GMIPQ9P107 970 aa23.03■■□□□ 1.28
OTUB1-212ENST00000543988 APEX2Q9UBZ4 518 aa23.03■■□□□ 1.28
OTUB1-212ENST00000543988 RNF225M0QZC1 329 aaPredicted RBP23.02■■□□□ 1.28
OTUB1-212ENST00000543988 O00370 1275 aa23.02■■□□□ 1.28
OTUB1-212ENST00000543988 CALCAP01258 141 aa23.02■■□□□ 1.28
OTUB1-212ENST00000543988 PAEPP09466 180 aa23.02■■□□□ 1.28
OTUB1-212ENST00000543988 PPP3CCP48454 512 aa23.02■■□□□ 1.28
OTUB1-212ENST00000543988 YAF2Q8IY57 180 aa23.02■■□□□ 1.28
OTUB1-212ENST00000543988 ANKRD52Q8NB46 1076 aa23.02■■□□□ 1.28
OTUB1-212ENST00000543988 PDZD8Q8NEN9 1154 aa23.02■■□□□ 1.28
OTUB1-212ENST00000543988 SIX2Q9NPC8 291 aa23.02■■□□□ 1.28
OTUB1-212ENST00000543988 TDP1Q9NUW8 608 aa23.02■■□□□ 1.28
OTUB1-212ENST00000543988 COMMD8Q9NX08 183 aa23.02■■□□□ 1.28
OTUB1-212ENST00000543988 TSPAN16Q9UKR8 245 aa23.02■■□□□ 1.28
OTUB1-212ENST00000543988 ARNTLO00327 626 aa23.01■■□□□ 1.27
OTUB1-212ENST00000543988 PES1O00541 588 aaKnown RBP23.01■■□□□ 1.27
OTUB1-212ENST00000543988 ZNF263O14978 683 aa23.01■■□□□ 1.27
OTUB1-212ENST00000543988 ABL1P00519 1130 aa23.01■■□□□ 1.27
OTUB1-212ENST00000543988 USP17L7P0C7H9 530 aa23.01■■□□□ 1.27
OTUB1-212ENST00000543988 VDRP11473 427 aa23.01■■□□□ 1.27
OTUB1-212ENST00000543988 KRT5P13647 590 aa23.01■■□□□ 1.27
OTUB1-212ENST00000543988 ZNF268Q14587 947 aaPredicted RBP23.01■■□□□ 1.27
OTUB1-212ENST00000543988 KRT31Q15323 416 aa23.01■■□□□ 1.27
OTUB1-212ENST00000543988 ANO6Q4KMQ2 910 aa23.01■■□□□ 1.27
OTUB1-212ENST00000543988 CWF19L1Q69YN2 538 aaKnown RBP23.01■■□□□ 1.27
OTUB1-212ENST00000543988 SUGP1Q8IWZ8 645 aaKnown RBP23.01■■□□□ 1.27
OTUB1-212ENST00000543988 FLCNQ8NFG4 579 aa23.01■■□□□ 1.27
OTUB1-212ENST00000543988 BPIFB1Q8TDL5 484 aa23.01■■□□□ 1.27
OTUB1-212ENST00000543988 OVCA2Q8WZ82 227 aa23.01■■□□□ 1.27
OTUB1-212ENST00000543988 DNASE1L2Q92874 299 aa23.01■■□□□ 1.27
OTUB1-212ENST00000543988 ZSWIM1Q9BR11 485 aa23.01■■□□□ 1.27
OTUB1-212ENST00000543988 KIF9Q9HAQ2 790 aa23.01■■□□□ 1.27
OTUB1-212ENST00000543988 AJAP1Q9UKB5 411 aaPredicted RBP23.01■■□□□ 1.27
OTUB1-212ENST00000543988 CNTN6Q9UQ52 1028 aa23.01■■□□□ 1.27
OTUB1-212ENST00000543988 OBSL1O75147 1896 aa23■■□□□ 1.27
OTUB1-212ENST00000543988 GREB1Q4ZG55 1949 aa23■■□□□ 1.27
OTUB1-212ENST00000543988 CYP26A1O43174 497 aa23■■□□□ 1.27
OTUB1-212ENST00000543988 OAS1P00973 400 aaKnown RBP23■■□□□ 1.27
OTUB1-212ENST00000543988 ZDHHC11BP0C7U3 371 aa23■■□□□ 1.27
OTUB1-212ENST00000543988 HDCP19113 662 aa23■■□□□ 1.27
OTUB1-212ENST00000543988 BRD2P25440 801 aaKnown RBP23■■□□□ 1.27
OTUB1-212ENST00000543988 PGFP49763 221 aa23■■□□□ 1.27
OTUB1-212ENST00000543988 BCAT1P54687 386 aa23■■□□□ 1.27
OTUB1-212ENST00000543988 VCPP55072 806 aaKnown RBP23■■□□□ 1.27
OTUB1-212ENST00000543988 NCAPHQ15003 741 aa23■■□□□ 1.27
OTUB1-212ENST00000543988 MLF2Q15773 248 aaPredicted RBP23■■□□□ 1.27
OTUB1-212ENST00000543988 SLC44A4Q53GD3 710 aa23■■□□□ 1.27
OTUB1-212ENST00000543988 ENOSF1Q7L5Y1 443 aa23■■□□□ 1.27
OTUB1-212ENST00000543988 PIGZQ86VD9 579 aa23■■□□□ 1.27
OTUB1-212ENST00000543988 AOPEPQ8N6M6 819 aa23■■□□□ 1.27
OTUB1-212ENST00000543988 IRF7Q92985 503 aa23■■□□□ 1.27
OTUB1-212ENST00000543988 ZFYVE19Q96K21 471 aa23■■□□□ 1.27
OTUB1-212ENST00000543988 FBXO44Q9H4M3 255 aa23■■□□□ 1.27
OTUB1-212ENST00000543988 TBC1D17Q9HA65 648 aa23■■□□□ 1.27
OTUB1-212ENST00000543988 CHORDC1Q9UHD1 332 aaPredicted RBP23■■□□□ 1.27
OTUB1-212ENST00000543988 KIAA1257Q9ULG3 409 aa23■■□□□ 1.27
OTUB1-212ENST00000543988 NUP210Q8TEM1 1887 aaPredicted RBP22.99■■□□□ 1.27
OTUB1-212ENST00000543988 TULP2O00295 520 aa22.99■■□□□ 1.27
OTUB1-212ENST00000543988 CHADO15335 359 aa22.99■■□□□ 1.27
OTUB1-212ENST00000543988 OLFM2O95897 454 aa22.99■■□□□ 1.27
OTUB1-212ENST00000543988 PFKLP17858 780 aa22.99■■□□□ 1.27
OTUB1-212ENST00000543988 PTMSP20962 102 aa22.99■■□□□ 1.27
OTUB1-212ENST00000543988 PDE6CP51160 858 aa22.99■■□□□ 1.27
OTUB1-212ENST00000543988 KIF11P52732 1056 aa22.99■■□□□ 1.27
OTUB1-212ENST00000543988 MFAP3P55082 362 aa22.99■■□□□ 1.27
OTUB1-212ENST00000543988 PDE4CQ08493 712 aa22.99■■□□□ 1.27
OTUB1-212ENST00000543988 USP4Q13107 963 aa22.99■■□□□ 1.27
OTUB1-212ENST00000543988 TTC16Q8NEE8 873 aa22.99■■□□□ 1.27
OTUB1-212ENST00000543988 HSD3B7Q9H2F3 369 aa22.99■■□□□ 1.27
OTUB1-212ENST00000543988 HEBP1Q9NRV9 189 aa22.99■■□□□ 1.27
OTUB1-212ENST00000543988 HESX1Q9UBX0 185 aa22.99■■□□□ 1.27
OTUB1-212ENST00000543988 ARHGAP26Q9UNA1 814 aa22.99■■□□□ 1.27
OTUB1-212ENST00000543988 SCML2Q9UQR0 700 aa22.99■■□□□ 1.27
OTUB1-212ENST00000543988 COL4A3Q01955 1670 aa22.99■■□□□ 1.27
OTUB1-212ENST00000543988 BST2Q10589 180 aaKnown RBP22.98■■□□□ 1.27
OTUB1-212ENST00000543988 ZNF77Q15935 545 aa22.98■■□□□ 1.27
OTUB1-212ENST00000543988 ARHGAP44Q17R89 818 aa22.98■■□□□ 1.27
OTUB1-212ENST00000543988 ARHGAP29Q52LW3 1261 aa22.98■■□□□ 1.27
OTUB1-212ENST00000543988 SNX30Q5VWJ9 437 aa22.98■■□□□ 1.27
OTUB1-212ENST00000543988 DPY19L2P1Q6NXN4 242 aa22.98■■□□□ 1.27
OTUB1-212ENST00000543988 LCLAT1Q6UWP7 414 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms