RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 CFAP97Q9P2B7 532 aa24.09■■□□□ 1.45
CDKN3-207ENST00000543789 APODP05090 189 aa24.08■■□□□ 1.45
CDKN3-207ENST00000543789 EIF2DP41214 584 aaKnown RBP24.08■■□□□ 1.45
CDKN3-207ENST00000543789 DHPSP49366 369 aaPredicted RBP24.08■■□□□ 1.45
CDKN3-207ENST00000543789 TNNC1P63316 161 aa24.08■■□□□ 1.45
CDKN3-207ENST00000543789 AMPD3Q01432 767 aa24.08■■□□□ 1.45
CDKN3-207ENST00000543789 WDR72Q3MJ13 1102 aa24.08■■□□□ 1.45
CDKN3-207ENST00000543789 HSF5Q4G112 596 aaPredicted RBP24.08■■□□□ 1.45
CDKN3-207ENST00000543789 TMEM92Q6UXU6 159 aa24.08■■□□□ 1.45
CDKN3-207ENST00000543789 DDX42Q86XP3 938 aaKnown RBP eCLIP24.08■■□□□ 1.45
CDKN3-207ENST00000543789 ALLCQ8N6M5 410 aa24.08■■□□□ 1.45
CDKN3-207ENST00000543789 TXNDC5Q8NBS9 432 aaKnown RBP24.08■■□□□ 1.45
CDKN3-207ENST00000543789 CCDC127Q96BQ5 260 aa24.08■■□□□ 1.45
CDKN3-207ENST00000543789 TRIM9Q9C026 710 aa24.08■■□□□ 1.45
CDKN3-207ENST00000543789 ELOVL4Q9GZR5 314 aa24.08■■□□□ 1.45
CDKN3-207ENST00000543789 ZSCAN16Q9H4T2 348 aaPredicted RBP24.08■■□□□ 1.45
CDKN3-207ENST00000543789 TMEM9BQ9NQ34 198 aa24.08■■□□□ 1.45
CDKN3-207ENST00000543789 AGPAT3Q9NRZ7 376 aa24.08■■□□□ 1.45
CDKN3-207ENST00000543789 SPAG17Q6Q759 2223 aa24.08■■□□□ 1.45
CDKN3-207ENST00000543789 ZNF638Q14966 1978 aaKnown RBP24.07■■□□□ 1.44
CDKN3-207ENST00000543789 A0A0A0MRY4 1105 aa24.07■■□□□ 1.44
CDKN3-207ENST00000543789 SCAMP3O14828 347 aaKnown RBP24.07■■□□□ 1.44
CDKN3-207ENST00000543789 GIPC1O14908 333 aa24.07■■□□□ 1.44
CDKN3-207ENST00000543789 TGFB1I1O43294 461 aa24.07■■□□□ 1.44
CDKN3-207ENST00000543789 KAT7O95251 611 aa24.07■■□□□ 1.44
CDKN3-207ENST00000543789 KLF8O95600 359 aaPredicted RBP24.07■■□□□ 1.44
CDKN3-207ENST00000543789 ADH1CP00326 375 aa24.07■■□□□ 1.44
CDKN3-207ENST00000543789 MBL2P11226 248 aaPredicted RBP24.07■■□□□ 1.44
CDKN3-207ENST00000543789 TIE1P35590 1138 aa24.07■■□□□ 1.44
CDKN3-207ENST00000543789 NASPP49321 788 aaPredicted RBP24.07■■□□□ 1.44
CDKN3-207ENST00000543789 CACNA2D1P54289 1103 aa24.07■■□□□ 1.44
CDKN3-207ENST00000543789 PSMD6Q15008 389 aa24.07■■□□□ 1.44
CDKN3-207ENST00000543789 SH3PXD2AQ5TCZ1 1133 aa24.07■■□□□ 1.44
CDKN3-207ENST00000543789 EPM2AIP1Q7L775 607 aaPredicted RBP24.07■■□□□ 1.44
CDKN3-207ENST00000543789 SFTPA1Q8IWL2 248 aa24.07■■□□□ 1.44
CDKN3-207ENST00000543789 IL17RCQ8NAC3 791 aa24.07■■□□□ 1.44
CDKN3-207ENST00000543789 OLIG1Q8TAK6 271 aa24.07■■□□□ 1.44
CDKN3-207ENST00000543789 PIGKQ92643 395 aa24.07■■□□□ 1.44
CDKN3-207ENST00000543789 CGRRF1Q99675 332 aa24.07■■□□□ 1.44
CDKN3-207ENST00000543789 ZNF518BQ9C0D4 1074 aa24.07■■□□□ 1.44
CDKN3-207ENST00000543789 CUEDC2Q9H467 287 aa24.07■■□□□ 1.44
CDKN3-207ENST00000543789 DPEP3Q9H4B8 488 aa24.07■■□□□ 1.44
CDKN3-207ENST00000543789 TBC1D14Q9P2M4 693 aa24.07■■□□□ 1.44
CDKN3-207ENST00000543789 MTMR6Q9Y217 621 aa24.07■■□□□ 1.44
CDKN3-207ENST00000543789 A8MXQ7 604 aa24.06■■□□□ 1.44
CDKN3-207ENST00000543789 PATE3B3GLJ2 98 aa24.06■■□□□ 1.44
CDKN3-207ENST00000543789 CDX4O14627 284 aaPredicted RBP24.06■■□□□ 1.44
CDKN3-207ENST00000543789 HNRNPLP14866 589 aaKnown RBP eCLIP24.06■■□□□ 1.44
CDKN3-207ENST00000543789 YWHAQP27348 245 aa24.06■■□□□ 1.44
CDKN3-207ENST00000543789 GRIA2P42262 883 aa24.06■■□□□ 1.44
CDKN3-207ENST00000543789 ASIC1P78348 528 aa24.06■■□□□ 1.44
CDKN3-207ENST00000543789 IRX4P78413 519 aa24.06■■□□□ 1.44
CDKN3-207ENST00000543789 CYP24A1Q07973 514 aa24.06■■□□□ 1.44
CDKN3-207ENST00000543789 MESP2Q0VG99 397 aa24.06■■□□□ 1.44
CDKN3-207ENST00000543789 IFRD2Q12894 506 aaPredicted RBP24.06■■□□□ 1.44
CDKN3-207ENST00000543789 TRPC3Q13507 836 aa24.06■■□□□ 1.44
CDKN3-207ENST00000543789 STK38Q15208 465 aa24.06■■□□□ 1.44
CDKN3-207ENST00000543789 E2F4Q16254 413 aa24.06■■□□□ 1.44
CDKN3-207ENST00000543789 EOGTQ5NDL2 527 aa24.06■■□□□ 1.44
CDKN3-207ENST00000543789 EMC10Q5UCC4 262 aa24.06■■□□□ 1.44
CDKN3-207ENST00000543789 NUP93Q8N1F7 819 aa24.06■■□□□ 1.44
CDKN3-207ENST00000543789 B3GNT5Q9BYG0 378 aa24.06■■□□□ 1.44
CDKN3-207ENST00000543789 POLMQ9NP87 494 aaPredicted RBP24.06■■□□□ 1.44
CDKN3-207ENST00000543789 TMEM30AQ9NV96 361 aa24.06■■□□□ 1.44
CDKN3-207ENST00000543789 CIZ1Q9ULV3 898 aaPredicted RBP24.06■■□□□ 1.44
CDKN3-207ENST00000543789 OBSL1O75147 1896 aa24.06■■□□□ 1.44
CDKN3-207ENST00000543789 SGK1O00141 431 aa24.05■■□□□ 1.44
CDKN3-207ENST00000543789 CLDN5O00501 218 aa24.05■■□□□ 1.44
CDKN3-207ENST00000543789 CLIC2O15247 247 aa24.05■■□□□ 1.44
CDKN3-207ENST00000543789 MAP3K13O43283 966 aa24.05■■□□□ 1.44
CDKN3-207ENST00000543789 PROS1P07225 676 aa24.05■■□□□ 1.44
CDKN3-207ENST00000543789 ADH5P11766 374 aa24.05■■□□□ 1.44
CDKN3-207ENST00000543789 TNFRSF4P43489 277 aa24.05■■□□□ 1.44
CDKN3-207ENST00000543789 CYP2J2P51589 502 aa24.05■■□□□ 1.44
CDKN3-207ENST00000543789 SNRPFP62306 86 aaKnown RBP24.05■■□□□ 1.44
CDKN3-207ENST00000543789 FAM26FQ5R3K3 315 aa24.05■■□□□ 1.44
CDKN3-207ENST00000543789 LPCAT2Q7L5N7 544 aa24.05■■□□□ 1.44
CDKN3-207ENST00000543789 C12orf40Q86WS4 652 aa24.05■■□□□ 1.44
CDKN3-207ENST00000543789 XXYLT1Q8NBI6 393 aa24.05■■□□□ 1.44
CDKN3-207ENST00000543789 LINC00301Q8NCQ3 95 aa24.05■■□□□ 1.44
CDKN3-207ENST00000543789 B3GALNT2Q8NCR0 500 aa24.05■■□□□ 1.44
CDKN3-207ENST00000543789 WHAMMQ8TF30 809 aa24.05■■□□□ 1.44
CDKN3-207ENST00000543789 RLN3Q8WXF3 142 aa24.05■■□□□ 1.44
CDKN3-207ENST00000543789 SPACA7Q96KW9 195 aa24.05■■□□□ 1.44
CDKN3-207ENST00000543789 ARHGEF4Q9NR80 690 aa24.05■■□□□ 1.44
CDKN3-207ENST00000543789 NXF1Q9UBU9 619 aaKnown RBP24.05■■□□□ 1.44
CDKN3-207ENST00000543789 E2F8A0AVK6 867 aa24.04■■□□□ 1.44
CDKN3-207ENST00000543789 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.04■■□□□ 1.44
CDKN3-207ENST00000543789 RTN3O95197 1032 aaPredicted RBP24.04■■□□□ 1.44
CDKN3-207ENST00000543789 STAU1O95793 577 aaKnown RBP24.04■■□□□ 1.44
CDKN3-207ENST00000543789 CEACAM1P13688 526 aa24.04■■□□□ 1.44
CDKN3-207ENST00000543789 CSRP1P21291 193 aaKnown RBP24.04■■□□□ 1.44
CDKN3-207ENST00000543789 ATICP31939 592 aa24.04■■□□□ 1.44
CDKN3-207ENST00000543789 P2RY2P41231 377 aa24.04■■□□□ 1.44
CDKN3-207ENST00000543789 KIR2DL1P43626 348 aaPredicted RBP24.04■■□□□ 1.44
CDKN3-207ENST00000543789 MYL6P60660 151 aa24.04■■□□□ 1.44
CDKN3-207ENST00000543789 ZNF252P-AS1Q0IIN9 211 aa24.04■■□□□ 1.44
CDKN3-207ENST00000543789 CNNM4Q6P4Q7 775 aa24.04■■□□□ 1.44
CDKN3-207ENST00000543789 IQUBQ8NA54 791 aa24.04■■□□□ 1.44
CDKN3-207ENST00000543789 PDZD8Q8NEN9 1154 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms