RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 SPEM2Q0P670 501 aa13.95□□□□□ -0.18
RTN3-212ENST00000543123 SGSM1Q2NKQ1 1148 aa13.95□□□□□ -0.18
RTN3-212ENST00000543123 KMT5BQ4FZB7 885 aa13.95□□□□□ -0.18
RTN3-212ENST00000543123 NUP93Q8N1F7 819 aa13.95□□□□□ -0.18
RTN3-212ENST00000543123 KIAA0895Q8NCT3 520 aa13.95□□□□□ -0.18
RTN3-212ENST00000543123 TMC2Q8TDI7 906 aa13.95□□□□□ -0.18
RTN3-212ENST00000543123 GAB3Q8WWW8 586 aa13.95□□□□□ -0.18
RTN3-212ENST00000543123 ZNF516Q92618 1163 aa13.95□□□□□ -0.18
RTN3-212ENST00000543123 CHFRQ96EP1 664 aa13.95□□□□□ -0.18
RTN3-212ENST00000543123 SMARCD1Q96GM5 515 aa13.95□□□□□ -0.18
RTN3-212ENST00000543123 MED10Q9BTT4 135 aa13.95□□□□□ -0.18
RTN3-212ENST00000543123 IMPG2Q9BZV3 1241 aa13.95□□□□□ -0.18
RTN3-212ENST00000543123 ZNF518BQ9C0D4 1074 aa13.95□□□□□ -0.18
RTN3-212ENST00000543123 GZF1Q9H116 711 aaPredicted RBP13.95□□□□□ -0.18
RTN3-212ENST00000543123 DPEP3Q9H4B8 488 aa13.95□□□□□ -0.18
RTN3-212ENST00000543123 SMYD3Q9H7B4 428 aa13.95□□□□□ -0.18
RTN3-212ENST00000543123 DMAP1Q9NPF5 467 aaPredicted RBP13.95□□□□□ -0.18
RTN3-212ENST00000543123 DMAC2Q9NW81 257 aa13.95□□□□□ -0.18
RTN3-212ENST00000543123 ANAPC1Q9H1A4 1944 aa13.95□□□□□ -0.18
RTN3-212ENST00000543123 A0A1B0GVL5 298 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 LEFTY2O00292 366 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 IKBKBO14920 756 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 OLFM2O95897 454 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 CCDC192P0DO97 292 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 YWHAQP27348 245 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 TAF10Q12962 218 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 CSRP2Q16527 193 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 SCARA5Q6ZMJ2 495 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 SYT13Q7L8C5 426 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 CACNA2D4Q7Z3S7 1137 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 FAM35AQ86V20 835 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 FAM160A2Q8N612 972 aaPredicted RBP13.94□□□□□ -0.18
RTN3-212ENST00000543123 NETO1Q8TDF5 533 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 LOXL4Q96JB6 756 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 RTKNQ9BST9 563 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 B3GNT5Q9BYG0 378 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 SCAND2PQ9GZW5 306 aaPredicted RBP13.94□□□□□ -0.18
RTN3-212ENST00000543123 KCTD10Q9H3F6 313 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 SEMA4GQ9NTN9 838 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 C2orf42Q9NWW7 574 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 COMMD8Q9NX08 183 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 HPSEQ9Y251 543 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 CPQQ9Y646 472 aa13.94□□□□□ -0.18
RTN3-212ENST00000543123 MAPK13O15264 365 aa13.93□□□□□ -0.18
RTN3-212ENST00000543123 APBB3O95704 486 aa13.93□□□□□ -0.18
RTN3-212ENST00000543123 ADH1CP00326 375 aa13.93□□□□□ -0.18
RTN3-212ENST00000543123 OAS1P00973 400 aaKnown RBP13.93□□□□□ -0.18
RTN3-212ENST00000543123 C4BPAP04003 597 aaKnown RBP13.93□□□□□ -0.18
RTN3-212ENST00000543123 TGM1P22735 817 aa13.93□□□□□ -0.18
RTN3-212ENST00000543123 RPL13P26373 211 aaKnown RBP13.93□□□□□ -0.18
RTN3-212ENST00000543123 PIK3CAP42336 1068 aa13.93□□□□□ -0.18
RTN3-212ENST00000543123 TUBP50607 506 aa13.93□□□□□ -0.18
RTN3-212ENST00000543123 IFRD2Q12894 506 aaPredicted RBP13.93□□□□□ -0.18
RTN3-212ENST00000543123 SRSF5Q13243 272 aaKnown RBP13.93□□□□□ -0.18
RTN3-212ENST00000543123 ZACNQ401N2 412 aa13.93□□□□□ -0.18
RTN3-212ENST00000543123 CEP135Q66GS9 1140 aa13.93□□□□□ -0.18
RTN3-212ENST00000543123 PKN3Q6P5Z2 889 aa13.93□□□□□ -0.18
RTN3-212ENST00000543123 UNC93AQ86WB7 457 aa13.93□□□□□ -0.18
RTN3-212ENST00000543123 CCDC150Q8NCX0 1101 aa13.93□□□□□ -0.18
RTN3-212ENST00000543123 RPLP0P6Q8NHW5 317 aa13.93□□□□□ -0.18
RTN3-212ENST00000543123 FBXO32Q969P5 355 aa13.93□□□□□ -0.18
RTN3-212ENST00000543123 PARD6AQ9NPB6 346 aa13.93□□□□□ -0.18
RTN3-212ENST00000543123 TBC1D14Q9P2M4 693 aa13.93□□□□□ -0.18
RTN3-212ENST00000543123 NME7Q9Y5B8 376 aa13.93□□□□□ -0.18
RTN3-212ENST00000543123 CLDN5O00501 218 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 AXIN1O15169 862 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 RHOBTB3O94955 611 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 MBL2P11226 248 aaPredicted RBP13.92□□□□□ -0.18
RTN3-212ENST00000543123 KRT13P13646 458 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 EIF2DP41214 584 aaKnown RBP13.92□□□□□ -0.18
RTN3-212ENST00000543123 RAP1GAPP47736 663 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 CACNA2D1P54289 1103 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 CDH8P55286 799 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 ENPEPQ07075 957 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 HECTD3Q5T447 861 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 PRR23CQ6ZRP0 262 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 INTS8Q75QN2 995 aaKnown RBP13.92□□□□□ -0.18
RTN3-212ENST00000543123 FILIP1Q7Z7B0 1213 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 C11orf74Q86VG3 221 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 PLEKHO2Q8TD55 490 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 OTUB2Q96DC9 234 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 NACA2Q9H009 215 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 FBXO44Q9H4M3 255 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 FBRSL1Q9HCM7 1045 aaKnown RBP13.92□□□□□ -0.18
RTN3-212ENST00000543123 KRT82Q9NSB4 513 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 SMPD4Q9NXE4 827 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 CFAP97Q9P2B7 532 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 TRAF3IP3Q9Y228 551 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 PCDHGA5Q9Y5G8 931 aa13.92□□□□□ -0.18
RTN3-212ENST00000543123 FAM237AA0A1B0GTK4 181 aa13.91□□□□□ -0.18
RTN3-212ENST00000543123 A0A1W2PQ27 194 aa13.91□□□□□ -0.18
RTN3-212ENST00000543123 A0A1W2PQ64 194 aa13.91□□□□□ -0.18
RTN3-212ENST00000543123 A0A1W2PQD8 194 aa13.91□□□□□ -0.18
RTN3-212ENST00000543123 E2F8A0AVK6 867 aa13.91□□□□□ -0.18
RTN3-212ENST00000543123 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.91□□□□□ -0.18
RTN3-212ENST00000543123 AP1G2O75843 785 aa13.91□□□□□ -0.18
RTN3-212ENST00000543123 VNN1O95497 513 aa13.91□□□□□ -0.18
RTN3-212ENST00000543123 ASS1P00966 412 aaKnown RBP13.91□□□□□ -0.18
RTN3-212ENST00000543123 CYP17A1P05093 508 aa13.91□□□□□ -0.18
RTN3-212ENST00000543123 NR2F2P24468 414 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms