RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 GOLGA7BQ2TAP0 167 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 MGAT5BQ3V5L5 792 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 ANKRD54Q6NXT1 300 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 ALKBH5Q6P6C2 394 aaKnown RBP6.19□□□□□ -1.42
ABCF1-207ENST00000542772 SYCE2Q6PIF2 218 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 RAD9BQ6WBX8 426 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 DENND5BQ6ZUT9 1274 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 BEND5Q7L4P6 421 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 BHLHA9Q7RTU4 235 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 GPR149Q86SP6 731 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 VPS36Q86VN1 386 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 ERICH1Q86X53 443 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 ZDHHC17Q8IUH5 632 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 SCUBE3Q8IX30 993 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 MCOLN2Q8IZK6 566 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 DEFB123Q8N688 67 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 TTC9BQ8N6N2 239 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 CPA5Q8WXQ8 436 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 OVCA2Q8WZ82 227 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 IRGQQ8WZA9 623 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 ZNF707Q96C28 371 aaPredicted RBP6.19□□□□□ -1.42
ABCF1-207ENST00000542772 C18orf8Q96DM3 657 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 MCRS1Q96EZ8 462 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 MSLNLQ96KJ4 702 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 PPP1R13BQ96KQ4 1090 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 CCDC42Q96M95 316 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 ZNF512Q96ME7 567 aaPredicted RBP6.19□□□□□ -1.42
ABCF1-207ENST00000542772 CPXM1Q96SM3 734 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 BAG1Q99933 345 aaPredicted RBP6.19□□□□□ -1.42
ABCF1-207ENST00000542772 MED10Q9BTT4 135 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 IL21Q9HBE4 155 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 CNGB3Q9NQW8 809 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 DZANK1Q9NVP4 752 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 EHD2Q9NZN4 543 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 DNMT3BQ9UBC3 853 aaKnown RBP6.19□□□□□ -1.42
ABCF1-207ENST00000542772 INTUQ9ULD6 942 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 SCML2Q9UQR0 700 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 YIPF1Q9Y548 306 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 INSL5Q9Y5Q6 135 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 NOTCH4Q99466 2003 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 PRRC2BQ5JSZ5 2229 aaKnown RBP6.18□□□□□ -1.42
ABCF1-207ENST00000542772 PATJQ8NI35 1801 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 ANKRD62A6NC57 917 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 SIGLEC16A6NMB1 481 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 M0QYV0 167 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 PRRG1O14668 218 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 LINC01565O15544 149 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 PJA2O43164 708 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 ARHGAP6O43182 974 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 PAPSS1O43252 624 aaPredicted RBP6.18□□□□□ -1.42
ABCF1-207ENST00000542772 RFPL2O75678 378 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 SOAT2O75908 522 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 FBXO21O94952 628 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 NDUFA10O95299 355 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 LRG1P02750 347 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 FYNP06241 537 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 GLI1P08151 1106 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 SSTR3P32745 418 aaPredicted RBP6.18□□□□□ -1.42
ABCF1-207ENST00000542772 CA8P35219 290 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 CYLC1P35663 651 aaPredicted RBP6.18□□□□□ -1.42
ABCF1-207ENST00000542772 GPR15P49685 360 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 PSEN1P49768 467 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 SLC5A3P53794 718 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 DAOAP59103 153 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 USP46P62068 366 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 MRPS5P82675 430 aaKnown RBP6.18□□□□□ -1.42
ABCF1-207ENST00000542772 CCZ1BP86790 482 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 CCZ1P86791 482 aaPredicted RBP6.18□□□□□ -1.42
ABCF1-207ENST00000542772 RBM10P98175 930 aaKnown RBP6.18□□□□□ -1.42
ABCF1-207ENST00000542772 SLC6A3Q01959 620 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 ITIH3Q06033 890 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 GFPT1Q06210 699 aaPredicted RBP6.18□□□□□ -1.42
ABCF1-207ENST00000542772 C1QBPQ07021 282 aaKnown RBP6.18□□□□□ -1.42
ABCF1-207ENST00000542772 DLX2Q07687 328 aaPredicted RBP6.18□□□□□ -1.42
ABCF1-207ENST00000542772 PDCLQ13371 301 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 EIF4EBP2Q13542 120 aaPredicted RBP6.18□□□□□ -1.42
ABCF1-207ENST00000542772 PTPN20Q4JDL3 420 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 PABPC1LQ4VXU2 614 aaKnown RBP6.18□□□□□ -1.42
ABCF1-207ENST00000542772 PPM1LQ5SGD2 360 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 PPP1R15BQ5SWA1 713 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 CCDC122Q5T0U0 273 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 LIN9Q5TKA1 542 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 TAF3Q5VWG9 929 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 PLEKHA7Q6IQ23 1121 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 ELMSAN1Q6PJG2 1045 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 ZNF662Q6ZS27 426 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 Q7L0L9 218 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 MON1BQ7L1V2 547 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 GPRIN1Q7Z2K8 1008 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 TMEM150AQ86TG1 271 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 ITIH5Q86UX2 942 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 MON1AQ86VX9 555 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 XYLT1Q86Y38 959 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 TMC8Q8IU68 726 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 SCN4BQ8IWT1 228 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 LEMD2Q8NC56 503 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 C1orf131Q8NDD1 294 aaKnown RBP6.18□□□□□ -1.42
ABCF1-207ENST00000542772 CCDC112Q8NEF3 446 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 SCAMP5Q8TAC9 235 aa6.18□□□□□ -1.42
ABCF1-207ENST00000542772 SLC7A14Q8TBB6 771 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms