RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 MED19A0JLT2 244 aaPredicted RBP12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 RNF40O75150 1001 aa12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 AKAP3O75969 853 aa12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 ASS1P00966 412 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 RETP07949 1114 aa12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 ZDHHC11BP0C7U3 371 aa12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 OPRD1P41143 372 aa12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 SYKP43405 635 aa12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 PPP3CCP48454 512 aa12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 PXNP49023 591 aaPredicted RBP12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 ATXN1P54253 815 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 SPEM2Q0P670 501 aa12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 MESP2Q0VG99 397 aa12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 SIM2Q14190 667 aaPredicted RBP12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 NFIL3Q16649 462 aa12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 SGSM1Q2NKQ1 1148 aa12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 LAIR1Q6GTX8 287 aa12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 SPOPLQ6IQ16 392 aa12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 NUP93Q8N1F7 819 aa12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 GPR161Q8N6U8 529 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 KIAA1958Q8N8K9 716 aa12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 ZFRQ96KR1 1074 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 SMOQ99835 787 aa12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 ELOVL4Q9GZR5 314 aa12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 APOBEC3GQ9HC16 384 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 EXOC1Q9NV70 894 aa12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 HMGXB4Q9UGU5 601 aa12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 CHORDC1Q9UHD1 332 aaPredicted RBP12.56□□□□□ -0.4
CLSTN3-211ENST00000541667 MYOFQ9NZM1 2061 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 A0A0A0MRY4 1105 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 A0A1W2PQ27 194 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 A0A1W2PQ64 194 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 A0A1W2PQD8 194 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 K7EQS6 105 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 MAPK13O15264 365 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 PHACTR2O75167 634 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 ANXA13P27216 316 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 YWHAQP27348 245 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 ASPAP45381 313 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 KRT85P78386 507 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 AMPD2Q01433 879 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 PPP3CAQ08209 521 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 BIRC3Q13489 604 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 KCNB1Q14721 858 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 ZNF699Q32M78 642 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 ZCWPW2Q504Y3 356 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 ZNF667Q5HYK9 610 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 RHBDF2Q6PJF5 856 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 KRBA2Q6ZNG9 492 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 ACOT1Q86TX2 421 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 FAM35AQ86V20 835 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 CPA6Q8N4T0 437 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 FAM160A2Q8N612 972 aaPredicted RBP12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 C12orf29Q8N999 325 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 CD101Q93033 1021 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 ATP2A3Q93084 1043 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 WBP2Q969T9 261 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 TWNKQ96RR1 684 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 CSNK1G1Q9HCP0 422 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 MAPK8IP1Q9UQF2 711 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 CPQQ9Y646 472 aa12.55□□□□□ -0.4
CLSTN3-211ENST00000541667 HELZP42694 1942 aaKnown RBP12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 EML5Q05BV3 1969 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 GREM1O60565 184 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 ATG13O75143 517 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 ZNF202O95125 648 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 HLA-DRAP01903 254 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 SLC6A11P48066 632 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 IFNAR2P48551 515 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 NDST1P52848 882 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 ORC1Q13415 861 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 DHCR24Q15392 516 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 FBXO43Q4G163 708 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 PRR23BQ6ZRT6 265 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 SYT13Q7L8C5 426 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 DGLUCYQ7Z3D6 616 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 FILIP1Q7Z7B0 1213 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 SFTPA1Q8IWL2 248 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 TTC16Q8NEE8 873 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 WHAMMQ8TF30 809 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 TAF4BQ92750 862 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 SMPD4Q9NXE4 827 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 EHD2Q9NZN4 543 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 MYO16Q9Y6X6 1858 aa12.54□□□□□ -0.4
CLSTN3-211ENST00000541667 HHLA1C9JL84 531 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 SCAMP3O14828 347 aaKnown RBP12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 COCHO43405 550 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 LRP3O75074 770 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 RTN3O95197 1032 aaPredicted RBP12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 CYP17A1P05093 508 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 CCDC130P13994 396 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 PDE6CP51160 858 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 VAMP7P51809 220 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 ENPEPQ07075 957 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 INCA1Q0VD86 236 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 CSRP2Q16527 193 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 CEP135Q66GS9 1140 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 SCARA5Q6ZMJ2 495 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 UNC93AQ86WB7 457 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms