RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 HSFY1Q96LI6 401 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 NOX5Q96PH1 765 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 LHX5Q9H2C1 402 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 TASP1Q9H6P5 420 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 TMEM30AQ9NV96 361 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 CDH22Q9UJ99 828 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 XIRP2A4UGR9 3374 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 A0A1W2PRU2 124 aa19.81■□□□□ 0.76
VPS33A-205ENST00000541169 M0QYV0 167 aa19.81■□□□□ 0.76
VPS33A-205ENST00000541169 BEST1O76090 585 aa19.81■□□□□ 0.76
VPS33A-205ENST00000541169 CLCN1P35523 988 aa19.81■□□□□ 0.76
VPS33A-205ENST00000541169 ACADSBP45954 432 aa19.81■□□□□ 0.76
VPS33A-205ENST00000541169 TUBP50607 506 aa19.81■□□□□ 0.76
VPS33A-205ENST00000541169 CDR1P51861 262 aa19.81■□□□□ 0.76
VPS33A-205ENST00000541169 SDHAF4Q5VUM1 108 aa19.81■□□□□ 0.76
VPS33A-205ENST00000541169 SNX30Q5VWJ9 437 aa19.81■□□□□ 0.76
VPS33A-205ENST00000541169 SCML4Q8N228 414 aa19.81■□□□□ 0.76
VPS33A-205ENST00000541169 RNF214Q8ND24 703 aa19.81■□□□□ 0.76
VPS33A-205ENST00000541169 ZNF397Q8NF99 534 aaPredicted RBP19.81■□□□□ 0.76
VPS33A-205ENST00000541169 SLC35F5Q8WV83 523 aa19.81■□□□□ 0.76
VPS33A-205ENST00000541169 FBXO32Q969P5 355 aa19.81■□□□□ 0.76
VPS33A-205ENST00000541169 UHRF1Q96T88 793 aaPredicted RBP19.81■□□□□ 0.76
VPS33A-205ENST00000541169 SLITRK6Q9H5Y7 841 aa19.81■□□□□ 0.76
VPS33A-205ENST00000541169 TRPV4Q9HBA0 871 aa19.81■□□□□ 0.76
VPS33A-205ENST00000541169 LRRC4Q9HBW1 653 aa19.81■□□□□ 0.76
VPS33A-205ENST00000541169 ZNF334Q9HCZ1 680 aaPredicted RBP19.81■□□□□ 0.76
VPS33A-205ENST00000541169 TLR8Q9NR97 1041 aaKnown RBP19.81■□□□□ 0.76
VPS33A-205ENST00000541169 IFNKQ9P0W0 207 aa19.81■□□□□ 0.76
VPS33A-205ENST00000541169 SCML2Q9UQR0 700 aa19.81■□□□□ 0.76
VPS33A-205ENST00000541169 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.81■□□□□ 0.76
VPS33A-205ENST00000541169 ITIH6Q6UXX5 1313 aa19.8■□□□□ 0.76
VPS33A-205ENST00000541169 A0A1W2PQJ5 194 aa19.8■□□□□ 0.76
VPS33A-205ENST00000541169 C2CD4DB7Z1M9 353 aa19.8■□□□□ 0.76
VPS33A-205ENST00000541169 HHLA1C9JL84 531 aa19.8■□□□□ 0.76
VPS33A-205ENST00000541169 BRD2P25440 801 aaKnown RBP19.8■□□□□ 0.76
VPS33A-205ENST00000541169 SSTR3P32745 418 aaPredicted RBP19.8■□□□□ 0.76
VPS33A-205ENST00000541169 CCR2P41597 374 aa19.8■□□□□ 0.76
VPS33A-205ENST00000541169 KLK7P49862 253 aa19.8■□□□□ 0.76
VPS33A-205ENST00000541169 KIF11P52732 1056 aa19.8■□□□□ 0.76
VPS33A-205ENST00000541169 PDE4CQ08493 712 aa19.8■□□□□ 0.76
VPS33A-205ENST00000541169 MTMR3Q13615 1198 aa19.8■□□□□ 0.76
VPS33A-205ENST00000541169 RAB41Q5JT25 222 aa19.8■□□□□ 0.76
VPS33A-205ENST00000541169 SARM1Q6SZW1 724 aa19.8■□□□□ 0.76
VPS33A-205ENST00000541169 CCDC186Q7Z3E2 898 aa19.8■□□□□ 0.76
VPS33A-205ENST00000541169 TADA2BQ86TJ2 420 aa19.8■□□□□ 0.76
VPS33A-205ENST00000541169 PIGZQ86VD9 579 aa19.8■□□□□ 0.76
VPS33A-205ENST00000541169 MON1AQ86VX9 555 aa19.8■□□□□ 0.76
VPS33A-205ENST00000541169 TTC30AQ86WT1 665 aa19.8■□□□□ 0.76
VPS33A-205ENST00000541169 MYADMQ96S97 322 aa19.8■□□□□ 0.76
VPS33A-205ENST00000541169 CDK5RAP1Q96SZ6 601 aaKnown RBP19.8■□□□□ 0.76
VPS33A-205ENST00000541169 NLRC4Q9NPP4 1024 aa19.8■□□□□ 0.76
VPS33A-205ENST00000541169 OBP2AQ9NY56 170 aa19.8■□□□□ 0.76
VPS33A-205ENST00000541169 USP3Q9Y6I4 520 aa19.8■□□□□ 0.76
VPS33A-205ENST00000541169 ANHXE9PGG2 379 aa19.79■□□□□ 0.76
VPS33A-205ENST00000541169 SART1O43290 800 aaKnown RBP19.79■□□□□ 0.76
VPS33A-205ENST00000541169 MOSPD3O75425 235 aa19.79■□□□□ 0.76
VPS33A-205ENST00000541169 FBXO21O94952 628 aa19.79■□□□□ 0.76
VPS33A-205ENST00000541169 LSM8O95777 96 aaKnown RBP19.79■□□□□ 0.76
VPS33A-205ENST00000541169 CYP11B1P15538 503 aa19.79■□□□□ 0.76
VPS33A-205ENST00000541169 CEBPBP17676 345 aa19.79■□□□□ 0.76
VPS33A-205ENST00000541169 AVPR1AP37288 418 aa19.79■□□□□ 0.76
VPS33A-205ENST00000541169 TAF10Q12962 218 aa19.79■□□□□ 0.76
VPS33A-205ENST00000541169 TRIM14Q14142 442 aa19.79■□□□□ 0.76
VPS33A-205ENST00000541169 TEAD2Q15562 447 aa19.79■□□□□ 0.76
VPS33A-205ENST00000541169 GPR158Q5T848 1215 aa19.79■□□□□ 0.76
VPS33A-205ENST00000541169 TMEM150AQ86TG1 271 aa19.79■□□□□ 0.76
VPS33A-205ENST00000541169 ZNF276Q8N554 614 aa19.79■□□□□ 0.76
VPS33A-205ENST00000541169 FEZF2Q8TBJ5 459 aa19.79■□□□□ 0.76
VPS33A-205ENST00000541169 SMARCD2Q92925 531 aa19.79■□□□□ 0.76
VPS33A-205ENST00000541169 TCEAL4Q96EI5 215 aa19.79■□□□□ 0.76
VPS33A-205ENST00000541169 TRIM62Q9BVG3 475 aa19.79■□□□□ 0.76
VPS33A-205ENST00000541169 MIS12Q9H081 205 aa19.79■□□□□ 0.76
VPS33A-205ENST00000541169 CNGB3Q9NQW8 809 aa19.79■□□□□ 0.76
VPS33A-205ENST00000541169 AJAP1Q9UKB5 411 aaPredicted RBP19.79■□□□□ 0.76
VPS33A-205ENST00000541169 ZNF638Q14966 1978 aaKnown RBP19.79■□□□□ 0.76
VPS33A-205ENST00000541169 DENND4CQ5VZ89 1909 aa19.78■□□□□ 0.76
VPS33A-205ENST00000541169 TCF20Q9UGU0 1960 aaKnown RBP19.78■□□□□ 0.76
VPS33A-205ENST00000541169 TRAV19A0A0A6YYK7 116 aa19.78■□□□□ 0.76
VPS33A-205ENST00000541169 ZNF840PA6NDX5 716 aa19.78■□□□□ 0.76
VPS33A-205ENST00000541169 ECI2O75521 394 aa19.78■□□□□ 0.76
VPS33A-205ENST00000541169 FERP16591 822 aa19.78■□□□□ 0.76
VPS33A-205ENST00000541169 PBX1P40424 430 aa19.78■□□□□ 0.76
VPS33A-205ENST00000541169 GPD2P43304 727 aa19.78■□□□□ 0.76
VPS33A-205ENST00000541169 USP46P62068 366 aa19.78■□□□□ 0.76
VPS33A-205ENST00000541169 SLC47A2Q86VL8 602 aa19.78■□□□□ 0.76
VPS33A-205ENST00000541169 SIX6OS1Q8N1H7 587 aa19.78■□□□□ 0.76
VPS33A-205ENST00000541169 KIAA1958Q8N8K9 716 aa19.78■□□□□ 0.76
VPS33A-205ENST00000541169 SCAMP5Q8TAC9 235 aa19.78■□□□□ 0.76
VPS33A-205ENST00000541169 ING5Q8WYH8 240 aa19.78■□□□□ 0.76
VPS33A-205ENST00000541169 MCRS1Q96EZ8 462 aa19.78■□□□□ 0.76
VPS33A-205ENST00000541169 ASB16Q96NS5 453 aa19.78■□□□□ 0.76
VPS33A-205ENST00000541169 ZSWIM1Q9BR11 485 aa19.78■□□□□ 0.76
VPS33A-205ENST00000541169 XPO4Q9C0E2 1151 aaKnown RBP19.78■□□□□ 0.76
VPS33A-205ENST00000541169 PDCL3Q9H2J4 239 aa19.78■□□□□ 0.76
VPS33A-205ENST00000541169 KIF9Q9HAQ2 790 aa19.78■□□□□ 0.76
VPS33A-205ENST00000541169 ZFP14Q9HCL3 533 aa19.78■□□□□ 0.76
VPS33A-205ENST00000541169 DOCK6Q96HP0 2047 aa19.78■□□□□ 0.76
VPS33A-205ENST00000541169 DOCK8Q8NF50 2099 aa19.77■□□□□ 0.76
VPS33A-205ENST00000541169 EPHB6O15197 1021 aa19.77■□□□□ 0.76
VPS33A-205ENST00000541169 ZBED1O96006 694 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms