RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ZNF148Q9UQR1 794 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 RBMX2Q9Y388 322 aaKnown RBP5.46□□□□□ -1.54
PROM1-220ENST00000540805 PCDHGB5Q9Y5G0 923 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.46□□□□□ -1.54
PROM1-220ENST00000540805 ARID2Q68CP9 1835 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 A8MXQ7 604 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 H7C0C1 242 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 PIK3CDO00329 1044 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 PIAS1O75925 651 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 PGM3O95394 542 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 LYNP07948 512 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 HOXD10P28358 340 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 GCAP28676 217 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 MAPK4P31152 587 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 ATP5OP48047 213 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 RXRGP48443 463 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 SLC12A2P55011 1212 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 CACNB2Q08289 660 aaPredicted RBP5.45□□□□□ -1.54
PROM1-220ENST00000540805 MAP7D1Q3KQU3 841 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 SMUG1Q53HV7 270 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 FKBP1CQ5VVH2 108 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 SATL1Q86VE3 508 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 METTL23Q86XA0 190 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 ZCCHC9Q8N567 271 aaKnown RBP5.45□□□□□ -1.54
PROM1-220ENST00000540805 FAM151AQ8WW52 585 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 PTCD3Q96EY7 689 aaKnown RBP5.45□□□□□ -1.54
PROM1-220ENST00000540805 CLMNQ96JQ2 1002 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 FAM20AQ96MK3 541 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 OLFM3Q96PB7 478 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 EIF2AK1Q9BQI3 630 aaKnown RBP5.45□□□□□ -1.54
PROM1-220ENST00000540805 MSTO1Q9BUK6 570 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 TRIM55Q9BYV6 548 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 SEL1LQ9UBV2 794 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 ANAPC7Q9UJX3 599 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 VAV3Q9UKW4 847 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 FZD1Q9UP38 647 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 MAD1L1Q9Y6D9 718 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 A0A0G2JND7 137 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 A0A0J9YVX5 310 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 C2orf71A6NGG8 1288 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 GOLGA8CPA6NN73 597 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 SPTLC1O15269 473 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 SLC16A4O15374 487 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 P4HA2O15460 535 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 ESRRAP11474 423 aaPredicted RBP5.45□□□□□ -1.54
PROM1-220ENST00000540805 ARFIP2P53365 341 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 FMO1Q01740 532 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 BTKQ06187 659 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 DGKZQ13574 1117 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 THOC5Q13769 683 aaKnown RBP5.45□□□□□ -1.54
PROM1-220ENST00000540805 C6orf163Q5TEZ5 329 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 PCNX4Q63HM2 1172 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 OR6B2Q6IFH4 312 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 C1orf228Q6PIY5 440 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 UTS2BQ765I0 119 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 ZBTB46Q86UZ6 589 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 CDR2LQ86X02 465 aaPredicted RBP5.45□□□□□ -1.54
PROM1-220ENST00000540805 RFWD2Q8NHY2 731 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 WDR60Q8WVS4 1066 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 RSAD2Q8WXG1 361 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 SLC5A5Q92911 643 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 DDX27Q96GQ7 796 aaKnown RBP5.45□□□□□ -1.54
PROM1-220ENST00000540805 MPP4Q96JB8 637 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 CYTH2Q99418 400 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 MMP19Q99542 508 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 PPCSQ9HAB8 311 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 IL1RAPL1Q9NZN1 696 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 PSMC3IPQ9P2W1 217 aaPredicted RBP5.45□□□□□ -1.54
PROM1-220ENST00000540805 HEY2Q9UBP5 337 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 NOCTQ9UK39 431 aaKnown RBP5.45□□□□□ -1.54
PROM1-220ENST00000540805 R3HDM2Q9Y2K5 976 aaKnown RBP5.45□□□□□ -1.54
PROM1-220ENST00000540805 TMX2Q9Y320 296 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 IPO5O00410 1097 aaKnown RBP5.45□□□□□ -1.54
PROM1-220ENST00000540805 CYP26A1O43174 497 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 NFKBIAP25963 317 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 MXI1P50539 228 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 YWHAEP62258 255 aaKnown RBP5.45□□□□□ -1.54
PROM1-220ENST00000540805 DSG1Q02413 1049 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 GHRHRQ02643 423 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 OVGP1Q12889 678 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 MAPK6Q16659 721 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 WDR72Q3MJ13 1102 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 COL13A1Q5TAT6 717 aaPredicted RBP5.45□□□□□ -1.54
PROM1-220ENST00000540805 MFSD14CQ5VZR4 134 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 SCUBE1Q8IWY4 988 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 SLC7A5P1Q8MH63 180 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 KCTD17Q8N5Z5 321 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.45□□□□□ -1.54
PROM1-220ENST00000540805 CYP2W1Q8TAV3 490 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 CCDC110Q8TBZ0 833 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 KAT5Q92993 513 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 ANKRD36BP1Q96IX9 119 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 HEXIM2Q96MH2 286 aaKnown RBP5.45□□□□□ -1.54
PROM1-220ENST00000540805 SPATA16Q9BXB7 569 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 OSBPL8Q9BZF1 889 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 ASCC2Q9H1I8 757 aaPredicted RBP5.45□□□□□ -1.54
PROM1-220ENST00000540805 RANBP17Q9H2T7 1088 aaKnown RBP5.45□□□□□ -1.54
PROM1-220ENST00000540805 KRT82Q9NSB4 513 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 FBXO40Q9UH90 709 aa5.45□□□□□ -1.54
PROM1-220ENST00000540805 DOCK5Q9H7D0 1870 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms