RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 ATP11AP98196 1134 aa25.77■■□□□ 1.72
TTC3-225ENST00000540756 TMEM173Q86WV6 379 aaPredicted RBP25.77■■□□□ 1.72
TTC3-225ENST00000540756 ADAM33Q9BZ11 813 aa25.77■■□□□ 1.72
TTC3-225ENST00000540756 PRDM5Q9NQX1 630 aaPredicted RBP25.77■■□□□ 1.72
TTC3-225ENST00000540756 TMEM189-UBE2V1I3L0A0 370 aa25.76■■□□□ 1.72
TTC3-225ENST00000540756 MYBL2P10244 700 aa25.76■■□□□ 1.72
TTC3-225ENST00000540756 RALAP11233 206 aa25.76■■□□□ 1.72
TTC3-225ENST00000540756 YWHAHQ04917 246 aaPredicted RBP25.76■■□□□ 1.72
TTC3-225ENST00000540756 TRADDQ15628 312 aa25.76■■□□□ 1.72
TTC3-225ENST00000540756 ZFYVE27Q5T4F4 411 aa25.76■■□□□ 1.72
TTC3-225ENST00000540756 WDR93Q6P2C0 686 aa25.76■■□□□ 1.72
TTC3-225ENST00000540756 NAP1L3Q99457 506 aaPredicted RBP25.76■■□□□ 1.72
TTC3-225ENST00000540756 GPR62Q9BZJ7 368 aa25.76■■□□□ 1.72
TTC3-225ENST00000540756 MARCH5Q9NX47 278 aa25.76■■□□□ 1.72
TTC3-225ENST00000540756 NLRC5Q86WI3 1866 aa25.76■■□□□ 1.71
TTC3-225ENST00000540756 ESYT3A0FGR9 886 aa25.76■■□□□ 1.71
TTC3-225ENST00000540756 CCDC188H7C350 402 aa25.76■■□□□ 1.71
TTC3-225ENST00000540756 ZRANB2O95218 330 aaKnown RBP eCLIP25.76■■□□□ 1.71
TTC3-225ENST00000540756 PARNO95453 639 aaKnown RBP25.76■■□□□ 1.71
TTC3-225ENST00000540756 TYMPP19971 482 aa25.76■■□□□ 1.71
TTC3-225ENST00000540756 BDNFP23560 247 aa25.76■■□□□ 1.71
TTC3-225ENST00000540756 MIPP30301 263 aa25.76■■□□□ 1.71
TTC3-225ENST00000540756 ADCY2Q08462 1091 aa25.76■■□□□ 1.71
TTC3-225ENST00000540756 ADCY1Q08828 1119 aa25.76■■□□□ 1.71
TTC3-225ENST00000540756 PEBP4Q96S96 227 aa25.76■■□□□ 1.71
TTC3-225ENST00000540756 CTCFP49711 727 aaPredicted RBP25.75■■□□□ 1.71
TTC3-225ENST00000540756 EXD1Q8NHP7 514 aa25.75■■□□□ 1.71
TTC3-225ENST00000540756 CNPY3Q9BT09 278 aa25.75■■□□□ 1.71
TTC3-225ENST00000540756 STIM2Q9P246 746 aa25.75■■□□□ 1.71
TTC3-225ENST00000540756 LCMT1Q9UIC8 334 aa25.75■■□□□ 1.71
TTC3-225ENST00000540756 PTPRDP23468 1912 aa25.75■■□□□ 1.71
TTC3-225ENST00000540756 FSCN2O14926 492 aa25.75■■□□□ 1.71
TTC3-225ENST00000540756 KRT1P04264 644 aa25.75■■□□□ 1.71
TTC3-225ENST00000540756 KRT10P13645 584 aa25.75■■□□□ 1.71
TTC3-225ENST00000540756 CSF2RAP15509 400 aa25.75■■□□□ 1.71
TTC3-225ENST00000540756 ACADSBP45954 432 aa25.75■■□□□ 1.71
TTC3-225ENST00000540756 SLC8A3P57103 927 aa25.75■■□□□ 1.71
TTC3-225ENST00000540756 IKBKEQ14164 716 aa25.75■■□□□ 1.71
TTC3-225ENST00000540756 LRRC38Q5VT99 294 aa25.75■■□□□ 1.71
TTC3-225ENST00000540756 CCDC70Q6NSX1 233 aa25.75■■□□□ 1.71
TTC3-225ENST00000540756 MFSD7Q6UXD7 560 aa25.75■■□□□ 1.71
TTC3-225ENST00000540756 ZDHHC17Q8IUH5 632 aa25.75■■□□□ 1.71
TTC3-225ENST00000540756 ADAM28Q9UKQ2 775 aa25.75■■□□□ 1.71
TTC3-225ENST00000540756 HEXIM1O94992 359 aaKnown RBP25.74■■□□□ 1.71
TTC3-225ENST00000540756 PAX3P23760 479 aa25.74■■□□□ 1.71
TTC3-225ENST00000540756 SMC1AQ14683 1233 aaKnown RBP25.74■■□□□ 1.71
TTC3-225ENST00000540756 TTC27Q6P3X3 843 aa25.74■■□□□ 1.71
TTC3-225ENST00000540756 SLC26A9Q7LBE3 791 aa25.74■■□□□ 1.71
TTC3-225ENST00000540756 CEP57Q86XR8 500 aa25.74■■□□□ 1.71
TTC3-225ENST00000540756 THEM5Q8N1Q8 247 aa25.74■■□□□ 1.71
TTC3-225ENST00000540756 SPATA18Q8TC71 538 aa25.74■■□□□ 1.71
TTC3-225ENST00000540756 SLITRK1Q96PX8 696 aa25.74■■□□□ 1.71
TTC3-225ENST00000540756 CYLDQ9NQC7 956 aa25.74■■□□□ 1.71
TTC3-225ENST00000540756 CCDC151A5D8V7 595 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 ALDH2P05091 517 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 TKTL1P51854 596 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 SNX16P57768 344 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 GUCY2DQ02846 1103 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 GLE1Q53GS7 698 aaKnown RBP25.73■■□□□ 1.71
TTC3-225ENST00000540756 CNKSR3Q6P9H4 555 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 CYP4V2Q6ZWL3 525 aaPredicted RBP25.73■■□□□ 1.71
TTC3-225ENST00000540756 BCL7CQ8WUZ0 217 aaPredicted RBP25.73■■□□□ 1.71
TTC3-225ENST00000540756 C1orf54Q8WWF1 131 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 KCTD13Q8WZ19 329 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 SMARCD1Q96GM5 515 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 FAM118BQ9BPY3 351 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 LRRC4Q9HBW1 653 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 ARGLU1Q9NWB6 273 aaPredicted RBP25.73■■□□□ 1.71
TTC3-225ENST00000540756 ASNSD1Q9NWL6 643 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 USP18Q9UMW8 372 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 HHLA1C9JL84 531 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 TTI1O43156 1089 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 BRD3Q15059 726 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 FAM171A1Q5VUB5 890 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 KAZNQ674X7 775 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 NECAB2Q7Z6G3 386 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 ATG4AQ8WYN0 398 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 PLVAPQ9BX97 442 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 OSBPL8Q9BZF1 889 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 EPB41L5Q9HCM4 733 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 R3HDM2Q9Y2K5 976 aaKnown RBP25.73■■□□□ 1.71
TTC3-225ENST00000540756 FAN1Q9Y2M0 1017 aa25.73■■□□□ 1.71
TTC3-225ENST00000540756 GOLGA6L10A0A0M3HER8 536 aa25.72■■□□□ 1.71
TTC3-225ENST00000540756 LRRD1A4D1F6 860 aa25.72■■□□□ 1.71
TTC3-225ENST00000540756 RNF8O76064 485 aa25.72■■□□□ 1.71
TTC3-225ENST00000540756 GALTP07902 379 aa25.72■■□□□ 1.71
TTC3-225ENST00000540756 ATXN1P54253 815 aaKnown RBP25.72■■□□□ 1.71
TTC3-225ENST00000540756 HFE2Q6ZVN8 426 aa25.72■■□□□ 1.71
TTC3-225ENST00000540756 MAGOHBQ96A72 148 aaKnown RBP25.72■■□□□ 1.71
TTC3-225ENST00000540756 NGRNQ9NPE2 291 aaKnown RBP25.72■■□□□ 1.71
TTC3-225ENST00000540756 CALCOCO1Q9P1Z2 691 aa25.72■■□□□ 1.71
TTC3-225ENST00000540756 C3orf70A6NLC5 250 aaPredicted RBP25.71■■□□□ 1.71
TTC3-225ENST00000540756 HOXA2O43364 376 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 OAZ2O95190 189 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 TRUB2O95900 331 aaKnown RBP25.71■■□□□ 1.71
TTC3-225ENST00000540756 CD48P09326 243 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 SDC4P31431 198 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 KCNJ1P48048 391 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 MRPS5P82675 430 aaKnown RBP25.71■■□□□ 1.71
TTC3-225ENST00000540756 KLF1Q13351 362 aaPredicted RBP25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms