RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 CERCAMQ5T4B2 595 aa4.48□□□□□ -1.69
MDM2-227ENST00000540709 CATSPERGQ6ZRH7 1159 aa4.48□□□□□ -1.69
MDM2-227ENST00000540709 KCTD20Q7Z5Y7 419 aa4.48□□□□□ -1.69
MDM2-227ENST00000540709 GAS2L3Q86XJ1 694 aa4.48□□□□□ -1.69
MDM2-227ENST00000540709 OR56A3Q8NH54 315 aa4.48□□□□□ -1.69
MDM2-227ENST00000540709 ZBTB45Q96K62 511 aaPredicted RBP4.48□□□□□ -1.69
MDM2-227ENST00000540709 PPP1R9BQ96SB3 815 aa4.48□□□□□ -1.69
MDM2-227ENST00000540709 SEMA4CQ9C0C4 833 aa4.48□□□□□ -1.69
MDM2-227ENST00000540709 AMFRQ9UKV5 643 aa4.48□□□□□ -1.69
MDM2-227ENST00000540709 TPCN1Q9ULQ1 816 aa4.48□□□□□ -1.69
MDM2-227ENST00000540709 ZNF521Q96K83 1311 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 SMIM35A0A1B0GVV1 85 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 UBE2Q2LH0YL09 131 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 H7C4K7 107 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 TP73O15350 636 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 MAP4K4O95819 1239 aaPredicted RBP4.47□□□□□ -1.69
MDM2-227ENST00000540709 LATS1O95835 1130 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 SCGB1D2O95969 90 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 U2AF1L5P0DN76 240 aaPredicted RBP4.47□□□□□ -1.69
MDM2-227ENST00000540709 EN2P19622 333 aaPredicted RBP4.47□□□□□ -1.69
MDM2-227ENST00000540709 YY1P25490 414 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 RENBPP51606 427 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 COPB1P53618 953 aaKnown RBP4.47□□□□□ -1.69
MDM2-227ENST00000540709 SUMO2P61956 95 aaKnown RBP4.47□□□□□ -1.69
MDM2-227ENST00000540709 U2AF1Q01081 240 aaKnown RBP eCLIP4.47□□□□□ -1.69
MDM2-227ENST00000540709 STK3Q13188 491 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 C3orf38Q5JPI3 329 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 LRCH2Q5VUJ6 765 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 SWSAP1Q6NVH7 229 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 MAML1Q92585 1016 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 SPSB4Q96A44 273 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 SUCLG2Q96I99 432 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 RITA1Q96K30 269 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 CCDC17Q96LX7 622 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 MMS19Q96T76 1030 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 C1QTNF7Q9BXJ2 289 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 SMURF2Q9HAU4 748 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 KLHL13Q9P2N7 655 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 TCEAL9Q9UHQ7 104 aa4.47□□□□□ -1.69
MDM2-227ENST00000540709 G3BP2Q9UN86 482 aaKnown RBP4.47□□□□□ -1.69
MDM2-227ENST00000540709 DRG1Q9Y295 367 aaKnown RBP4.47□□□□□ -1.69
MDM2-227ENST00000540709 WDR17Q8IZU2 1322 aa4.46□□□□□ -1.69
MDM2-227ENST00000540709 POC1B-GALNT4F8VUJ3 575 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 PYCARD-AS1I3L0S3 204 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 RAB27BO00194 218 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 PTDSS1P48651 473 aaKnown RBP4.46□□□□□ -1.7
MDM2-227ENST00000540709 INSCQ1MX18 579 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 PLEKHG6Q3KR16 790 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 RNASE12Q5GAN4 147 aaKnown RBP4.46□□□□□ -1.7
MDM2-227ENST00000540709 FAM102BQ5T8I3 360 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 MORN5Q5VZ52 161 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 CXorf57Q6NSI4 855 aaKnown RBP4.46□□□□□ -1.7
MDM2-227ENST00000540709 CCDC149Q6ZUS6 474 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 GALNT4Q8N4A0 578 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 JDP2Q8WYK2 163 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 SNX18Q96RF0 628 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 C22orf23Q9BZE7 217 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 TMEM60Q9H2L4 133 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 FAM204AQ9H8W3 233 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 C1orf112Q9NSG2 853 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 STK32BQ9NY57 414 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 ITGB1BP2Q9UKP3 347 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 OGDHLQ9ULD0 1010 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 GABRQQ9UN88 632 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 EID1Q9Y6B2 187 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 CDY1Q9Y6F8 540 aa4.46□□□□□ -1.7
MDM2-227ENST00000540709 LOC102723971A0A1B0GUV8 181 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 FAM227AF5H4B4 570 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 PMPCBO75439 489 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 USP1O94782 785 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 FGAP02671 866 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 CYP2A6P11509 494 aaPredicted RBP4.45□□□□□ -1.7
MDM2-227ENST00000540709 MYCLP12524 364 aaPredicted RBP4.45□□□□□ -1.7
MDM2-227ENST00000540709 HGFP14210 728 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 CREB1P16220 341 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 GKP32189 559 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 BCAT1P54687 386 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 PSG6Q00889 435 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 ZNF268Q14587 947 aaPredicted RBP4.45□□□□□ -1.7
MDM2-227ENST00000540709 RABEP1Q15276 862 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 CNGA2Q16280 664 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 FAM187BQ17R55 369 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 KIAA0753Q2KHM9 967 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 AWAT1Q58HT5 328 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 APOA5Q6Q788 366 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 MTHFD1LQ6UB35 978 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 C1QL2Q7Z5L3 287 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 ZNF366Q8N895 744 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 C8orf58Q8NAV2 365 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 PRSS3P2Q8NHM4 247 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 RUNDC1Q96C34 613 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 HS6ST2Q96MM7 605 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 THAP7Q9BT49 309 aaPredicted RBP4.45□□□□□ -1.7
MDM2-227ENST00000540709 EFHD1Q9BUP0 239 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 DPH1Q9BZG8 443 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 SPRTNQ9H040 489 aaPredicted RBP4.45□□□□□ -1.7
MDM2-227ENST00000540709 ZNF287Q9HBT7 754 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 DDX20Q9UHI6 824 aaKnown RBP4.45□□□□□ -1.7
MDM2-227ENST00000540709 BTBD3Q9Y2F9 522 aa4.45□□□□□ -1.7
MDM2-227ENST00000540709 TMEM232C9JQI7 657 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms