RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 OTOL1A6NHN0 477 aaPredicted RBP9.57□□□□□ -0.88
LMO3-222ENST00000540445 MAPK13O15264 365 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 RTN3O95197 1032 aaPredicted RBP9.57□□□□□ -0.88
LMO3-222ENST00000540445 PAPSS2O95340 614 aaPredicted RBP9.57□□□□□ -0.88
LMO3-222ENST00000540445 SMC2O95347 1197 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 HLA-DRAP01903 254 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 TRIM49P0CI25 452 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 TRIM49CP0CI26 452 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 PFKLP17858 780 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 ID4P47928 161 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 GALK1P51570 392 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 CACNA2D1P54289 1103 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 SATB1Q01826 763 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 ORC1Q13415 861 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 NFIL3Q16649 462 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 HEATR6Q6AI08 1181 aaKnown RBP9.57□□□□□ -0.88
LMO3-222ENST00000540445 SPOPLQ6IQ16 392 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 SMYD4Q8IYR2 804 aaPredicted RBP9.57□□□□□ -0.88
LMO3-222ENST00000540445 KIAA2013Q8IYS2 634 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 SYNPOQ8N3V7 929 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 CPA6Q8N4T0 437 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 ATP2A3Q93084 1043 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 FBXO32Q969P5 355 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 CHFRQ96EP1 664 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 SMARCD1Q96GM5 515 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 DNAI2Q9GZS0 605 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 RNF38Q9H0F5 515 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 SDCBP2Q9H190 292 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 LINC00597Q9H2U6 94 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 ECT2Q9H8V3 914 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 RMND1Q9NWS8 449 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 GCNT4Q9P109 453 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 NCDNQ9UBB6 729 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 HOOK1Q9UJC3 728 aaKnown RBP9.57□□□□□ -0.88
LMO3-222ENST00000540445 RAB23Q9ULC3 237 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 WNT6Q9Y6F9 365 aa9.57□□□□□ -0.88
LMO3-222ENST00000540445 K7ESF4 209 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 LEFTY2O00292 366 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 TRDMT1O14717 391 aaKnown RBP9.56□□□□□ -0.88
LMO3-222ENST00000540445 CETN3O15182 167 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 ATG13O75143 517 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 AP1G2O75843 785 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 ASS1P00966 412 aaKnown RBP9.56□□□□□ -0.88
LMO3-222ENST00000540445 EPB41P11171 864 aaKnown RBP9.56□□□□□ -0.88
LMO3-222ENST00000540445 MBL2P11226 248 aaPredicted RBP9.56□□□□□ -0.88
LMO3-222ENST00000540445 CCDC130P13994 396 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 GJA4P35212 333 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 PRCPP42785 496 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 NDST1P52848 882 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 PPP3CAQ08209 521 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 CCINQ13939 588 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 ZNF77Q15935 545 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 EDRF1Q3B7T1 1238 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 TMEM196Q5HYL7 178 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 C1orf220Q5T0J3 134 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 ZNF658Q5TYW1 1059 aaPredicted RBP9.56□□□□□ -0.88
LMO3-222ENST00000540445 TCERG1LQ5VWI1 586 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 ISM2Q6H9L7 571 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 PRR23BQ6ZRT6 265 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 Q6ZS52 159 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 ERMP1Q7Z2K6 904 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 FAM35AQ86V20 835 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 UNC93AQ86WB7 457 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 FMR1NBQ8N0W7 255 aaPredicted RBP9.56□□□□□ -0.88
LMO3-222ENST00000540445 C12orf29Q8N999 325 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 PDZD8Q8NEN9 1154 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 SCAMP5Q8TAC9 235 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 TAS1R2Q8TE23 839 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 ERCC4Q92889 916 aaPredicted RBP9.56□□□□□ -0.88
LMO3-222ENST00000540445 SMARCE1Q969G3 411 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 RMDN1Q96DB5 314 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 GSDMAQ96QA5 445 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 TSG101Q99816 390 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 P2RY13Q9BPV8 354 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 TTLL2Q9BWV7 592 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 DMAP1Q9NPF5 467 aaPredicted RBP9.56□□□□□ -0.88
LMO3-222ENST00000540445 KRT82Q9NSB4 513 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 FAM49BQ9NUQ9 324 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 TMEM30AQ9NV96 361 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 SMPD4Q9NXE4 827 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 ARHGAP26Q9UNA1 814 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 SMG5Q9UPR3 1016 aaKnown RBP9.56□□□□□ -0.88
LMO3-222ENST00000540445 LAMA1P25391 3075 aa9.56□□□□□ -0.88
LMO3-222ENST00000540445 NUP205Q92621 2012 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 CEP192Q8TEP8 1941 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 CHURC1-FNTBB4DL54 471 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 BEST1O76090 585 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 NFATC1O95644 943 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 EGFP01133 1207 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 CD58P19256 250 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 DRD1P21728 446 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 TGM1P22735 817 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 ADORA2BP29275 332 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 FNTBP49356 437 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 MAP3K7CLP57077 242 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 FOXK2Q01167 660 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 DMWDQ09019 674 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 USP4Q13107 963 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 LPAL2Q16609 132 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 EML3Q32P44 896 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms