RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.06□□□□□ -1.12
CCDC60-204ENST00000539847 TMEM260Q9NX78 707 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 GCNT4Q9P109 453 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 STOML1Q9UBI4 398 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 APEX2Q9UBZ4 518 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 FETUBQ9UGM5 382 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 DBR1Q9UK59 544 aaKnown RBP8.06□□□□□ -1.12
CCDC60-204ENST00000539847 CCPG1Q9ULG6 757 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 PRR12Q9ULL5 1215 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 SMG5Q9UPR3 1016 aaKnown RBP8.06□□□□□ -1.12
CCDC60-204ENST00000539847 TMA7Q9Y2S6 64 aaKnown RBP8.06□□□□□ -1.12
CCDC60-204ENST00000539847 SERTM1A2A2V5 107 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 FAM47DPA6NHR8 397 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 ENO4A6NNW6 628 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 E9PMD0 336 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 J3QL48 77 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 EML1O00423 815 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 ZBTB5O15062 677 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 PEX11AO75192 247 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 ZIC2O95409 532 aaPredicted RBP8.05□□□□□ -1.12
CCDC60-204ENST00000539847 IQCF3P0C7M6 154 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 MAPTP10636 758 aaKnown RBP8.05□□□□□ -1.12
CCDC60-204ENST00000539847 BRAFP15056 766 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 MYOGP15173 224 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 IVDP26440 423 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 PTPN4P29074 926 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 DNAJA1P31689 397 aaKnown RBP8.05□□□□□ -1.12
CCDC60-204ENST00000539847 STX2P32856 288 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 KCNQ1P51787 676 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 CLCN2P51788 898 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 PSMC6P62333 389 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 RELBQ01201 579 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 TFF2Q03403 129 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 ZNF543Q08ER8 600 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 PRPF4BQ13523 1007 aaKnown RBP8.05□□□□□ -1.12
CCDC60-204ENST00000539847 ALCAMQ13740 583 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 PTK6Q13882 451 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 CTTNQ14247 550 aaKnown RBP8.05□□□□□ -1.12
CCDC60-204ENST00000539847 SIX1Q15475 284 aaPredicted RBP8.05□□□□□ -1.12
CCDC60-204ENST00000539847 GSTA3Q16772 222 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 FAM91A1Q658Y4 838 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 Q6ZVU0 165 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 INTS8Q75QN2 995 aaKnown RBP8.05□□□□□ -1.12
CCDC60-204ENST00000539847 ZNF598Q86UK7 904 aaKnown RBP8.05□□□□□ -1.12
CCDC60-204ENST00000539847 C12orf56Q8IXR9 622 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 CCDC105Q8IYK2 499 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 FAM186BQ8IYM0 893 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 ATL2Q8NHH9 583 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 EPS8L3Q8TE67 593 aaKnown RBP8.05□□□□□ -1.12
CCDC60-204ENST00000539847 DENND1AQ8TEH3 1009 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 CRYGNQ8WXF5 182 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 MAML1Q92585 1016 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 SNF8Q96H20 258 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 SCLYQ96I15 445 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 TTC25Q96NG3 672 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 LRRC37BQ96QE4 947 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 NR1H4Q96RI1 486 aaPredicted RBP8.05□□□□□ -1.12
CCDC60-204ENST00000539847 TGS1Q96RS0 853 aaKnown RBP8.05□□□□□ -1.12
CCDC60-204ENST00000539847 LRFN3Q9BTN0 628 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 OSBPL1AQ9BXW6 950 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 PITPNM3Q9BZ71 974 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 TRIM31Q9BZY9 425 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 MMADHCQ9H3L0 296 aaPredicted RBP8.05□□□□□ -1.12
CCDC60-204ENST00000539847 GOLPH3Q9H4A6 298 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 ZNF395Q9H8N7 513 aaPredicted RBP8.05□□□□□ -1.12
CCDC60-204ENST00000539847 PSTPIP2Q9H939 334 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 JMJD4Q9H9V9 463 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 LRRC4CQ9HCJ2 640 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 ERVK-5Q9HDB9 667 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 OSGEPQ9NPF4 335 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 EURLQ9NYK6 297 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 LARSQ9P2J5 1176 aaKnown RBP8.05□□□□□ -1.12
CCDC60-204ENST00000539847 DNAJB4Q9UDY4 337 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 LRCH1Q9Y2L9 728 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 AK5Q9Y6K8 562 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 MYH4Q9Y623 1939 aa8.05□□□□□ -1.12
CCDC60-204ENST00000539847 LRRC37A2A6NM11 1700 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 ABHD14A-ACY1A0A1B0GW23 586 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 PI4K2BG5E9Z4 385 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 C2CD2LO14523 706 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 TGFB1I1O43294 461 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 ASMTLO95671 621 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 GAS8O95995 478 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 FTLP02792 175 aaPredicted RBP8.04□□□□□ -1.12
CCDC60-204ENST00000539847 PDGFAP04085 211 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 ATP5BP06576 529 aaKnown RBP8.04□□□□□ -1.12
CCDC60-204ENST00000539847 CYP3A4P08684 503 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 GOLGA8HP0CJ92 632 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 CYP2C9P11712 490 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 KRT13P13646 458 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 MARK3P27448 753 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 NOS2P35228 1153 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 PCK1P35558 622 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 VHLP40337 213 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 SLC1A1P43005 524 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 RAB27AP51159 221 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 RPS6KA3P51812 740 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 WDR4P57081 412 aaKnown RBP8.04□□□□□ -1.12
CCDC60-204ENST00000539847 SPIRE1Q08AE8 756 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 BAATQ14032 418 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms