RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 MROH9Q5TGP6 573 aa6.71□□□□□ -1.33
LSAMP-207ENST00000539563 ZDHHC17Q8IUH5 632 aa6.71□□□□□ -1.33
LSAMP-207ENST00000539563 TMEM176AQ96HP8 235 aa6.71□□□□□ -1.33
LSAMP-207ENST00000539563 FAM167BQ9BTA0 163 aa6.71□□□□□ -1.33
LSAMP-207ENST00000539563 KBTBD4Q9NVX7 518 aa6.71□□□□□ -1.33
LSAMP-207ENST00000539563 KANSL3Q9P2N6 904 aa6.71□□□□□ -1.33
LSAMP-207ENST00000539563 SLC39A10Q9ULF5 831 aa6.71□□□□□ -1.33
LSAMP-207ENST00000539563 MAGEB16A2A368 324 aa6.71□□□□□ -1.33
LSAMP-207ENST00000539563 CYTH3O43739 400 aa6.71□□□□□ -1.33
LSAMP-207ENST00000539563 MED24O75448 989 aa6.71□□□□□ -1.33
LSAMP-207ENST00000539563 CELF2O95319 508 aaKnown RBP6.71□□□□□ -1.33
LSAMP-207ENST00000539563 ALBP02768 609 aa6.71□□□□□ -1.33
LSAMP-207ENST00000539563 CYP11B1P15538 503 aa6.71□□□□□ -1.33
LSAMP-207ENST00000539563 R3HDM1Q15032 1099 aaKnown RBP6.71□□□□□ -1.33
LSAMP-207ENST00000539563 NIPA1Q7RTP0 329 aa6.71□□□□□ -1.33
LSAMP-207ENST00000539563 ZNF438Q7Z4V0 828 aa6.71□□□□□ -1.33
LSAMP-207ENST00000539563 SRLQ86TD4 932 aa6.71□□□□□ -1.33
LSAMP-207ENST00000539563 RUSC1Q9BVN2 902 aa6.71□□□□□ -1.33
LSAMP-207ENST00000539563 TCHHQ07283 1943 aa6.71□□□□□ -1.33
LSAMP-207ENST00000539563 NCOA3Q9Y6Q9 1424 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 MYO1GB0I1T2 1018 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 ATMINO43313 823 aaPredicted RBP6.71□□□□□ -1.34
LSAMP-207ENST00000539563 THRAP10827 490 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 PRKAA2P54646 552 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 HUNKP57058 714 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 LRRC6Q86X45 466 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 OPTNQ96CV9 577 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 ERP27Q96DN0 273 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 SH3GL1Q99961 368 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 RMND5AQ9H871 391 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 DPP7Q9UHL4 492 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 NEURL4Q96JN8 1562 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 TMEM131LA2VDJ0 1609 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 CES2O00748 559 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 PMPCBO75439 489 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 MAPK1P28482 360 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 PTPN7P35236 360 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 NR2C2P49116 596 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 COPAP53621 1224 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 MCL1Q07820 350 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 APLFQ8IW19 511 aaPredicted RBP6.71□□□□□ -1.34
LSAMP-207ENST00000539563 SUGP1Q8IWZ8 645 aaKnown RBP6.71□□□□□ -1.34
LSAMP-207ENST00000539563 MRPS31Q92665 395 aaKnown RBP6.71□□□□□ -1.34
LSAMP-207ENST00000539563 WNK4Q96J92 1243 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 ZNF333Q96JL9 665 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 DNAJC7Q99615 494 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 TBC1D13Q9NVG8 400 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 FOXN3O00409 490 aaPredicted RBP6.71□□□□□ -1.34
LSAMP-207ENST00000539563 WDR47O94967 919 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 DPEP1P16444 411 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 NPTX2P47972 431 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 PTPAQ15257 358 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 DTNBP1Q96EV8 351 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 SENP2Q9HC62 589 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 TLR8Q9NR97 1041 aaKnown RBP6.71□□□□□ -1.34
LSAMP-207ENST00000539563 RAD54BQ9Y620 910 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 TM9SF1O15321 606 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 MPOP05164 745 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 MZF1P28698 734 aaPredicted RBP6.71□□□□□ -1.34
LSAMP-207ENST00000539563 PHKG1Q16816 387 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 WDR93Q6P2C0 686 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 MRPL48Q96GC5 212 aaKnown RBP6.71□□□□□ -1.34
LSAMP-207ENST00000539563 ZFYVE19Q96K21 471 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 MARCOQ9UEW3 520 aaPredicted RBP6.71□□□□□ -1.34
LSAMP-207ENST00000539563 RPS6KL1Q9Y6S9 549 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 PHF20L1A8MW92 1017 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 IGF2BP3O00425 579 aaKnown RBP eCLIP6.71□□□□□ -1.34
LSAMP-207ENST00000539563 RNASEH1O60930 286 aaKnown RBP6.71□□□□□ -1.34
LSAMP-207ENST00000539563 VCAM1P19320 739 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 RUNX1T1Q06455 604 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 ZNF720Q7Z2F6 126 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 TXNRD3Q86VQ6 643 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 SLC22A9Q8IVM8 553 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 FBXL16Q8N461 479 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 ZFP42Q96MM3 310 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 KCTD10Q9H3F6 313 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 KLK14Q9P0G3 267 aa6.71□□□□□ -1.34
LSAMP-207ENST00000539563 VWDEQ8N2E2 1590 aa6.7□□□□□ -1.34
LSAMP-207ENST00000539563 OXCT1P55809 520 aa6.7□□□□□ -1.34
LSAMP-207ENST00000539563 CYP24A1Q07973 514 aa6.7□□□□□ -1.34
LSAMP-207ENST00000539563 PLD1Q13393 1074 aa6.7□□□□□ -1.34
LSAMP-207ENST00000539563 NAA30Q147X3 362 aaPredicted RBP6.7□□□□□ -1.34
LSAMP-207ENST00000539563 DEPDC1Q5TB30 811 aa6.7□□□□□ -1.34
LSAMP-207ENST00000539563 KDM7AQ6ZMT4 941 aa6.7□□□□□ -1.34
LSAMP-207ENST00000539563 ITIH5Q86UX2 942 aa6.7□□□□□ -1.34
LSAMP-207ENST00000539563 CDR2LQ86X02 465 aaPredicted RBP6.7□□□□□ -1.34
LSAMP-207ENST00000539563 NT5DC4Q86YG4 428 aa6.7□□□□□ -1.34
LSAMP-207ENST00000539563 RIOX1Q9H6W3 641 aa6.7□□□□□ -1.34
LSAMP-207ENST00000539563 PDGFCQ9NRA1 345 aa6.7□□□□□ -1.34
LSAMP-207ENST00000539563 A0A1B0GW55 424 aa6.7□□□□□ -1.34
LSAMP-207ENST00000539563 KIF1CO43896 1103 aaKnown RBP6.7□□□□□ -1.34
LSAMP-207ENST00000539563 VPS26AO75436 327 aa6.7□□□□□ -1.34
LSAMP-207ENST00000539563 DUX4L2P0CJ85 424 aa6.7□□□□□ -1.34
LSAMP-207ENST00000539563 DUX4L3P0CJ86 424 aa6.7□□□□□ -1.34
LSAMP-207ENST00000539563 DUX4L4P0CJ87 422 aa6.7□□□□□ -1.34
LSAMP-207ENST00000539563 DUX4L5P0CJ88 424 aa6.7□□□□□ -1.34
LSAMP-207ENST00000539563 DUX4L6P0CJ89 424 aa6.7□□□□□ -1.34
LSAMP-207ENST00000539563 DUX4L7P0CJ90 424 aa6.7□□□□□ -1.34
LSAMP-207ENST00000539563 PYGMP11217 842 aa6.7□□□□□ -1.34
LSAMP-207ENST00000539563 RARGP13631 454 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms