RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 FAM170AA1A519 330 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 HHLA1C9JL84 531 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 H0YGN5 161 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 SART1O43290 800 aaKnown RBP11.21□□□□□ -0.61
LEMD3-202ENST00000539442 BEST1O76090 585 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 FBXO21O94952 628 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 OR1D2P34982 312 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 ROR1Q01973 937 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 RAB30Q15771 203 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 C2CD6Q53TS8 623 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 RAB41Q5JT25 222 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 PPP1R15BQ5SWA1 713 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 CYP4A22Q5TCH4 519 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 FAM109BQ6ICB4 259 aaPredicted RBP11.21□□□□□ -0.61
LEMD3-202ENST00000539442 C11orf63Q6NUN7 778 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 OLFML1Q6UWY5 402 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 SCML4Q8N228 414 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 SLC35F6Q8N357 371 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 LRRC57Q8N9N7 239 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 FEZF2Q8TBJ5 459 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 C8orf48Q96LL4 319 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 TGS1Q96RS0 853 aaKnown RBP11.21□□□□□ -0.61
LEMD3-202ENST00000539442 CLSTN3Q9BQT9 956 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 RXFP1Q9HBX9 757 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 CNGB3Q9NQW8 809 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 TJP2Q9UDY2 1190 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 AFF4Q9UHB7 1163 aaKnown RBP11.21□□□□□ -0.61
LEMD3-202ENST00000539442 ANAPC7Q9UJX3 599 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 MAFFQ9ULX9 164 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 COG5Q9UP83 839 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 IRAK3Q9Y616 596 aa11.21□□□□□ -0.61
LEMD3-202ENST00000539442 WDR27A2RRH5 827 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 GRID2IPA4D2P6 1211 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 TMEM191CA6NGB0 347 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 SIGLEC16A6NMB1 481 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 GRXCR1A8MXD5 290 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 F8VP50 259 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 C2CD2LO14523 706 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 PAPSS1O43252 624 aaPredicted RBP11.2□□□□□ -0.62
LEMD3-202ENST00000539442 BUB1BO60566 1050 aaPredicted RBP11.2□□□□□ -0.62
LEMD3-202ENST00000539442 LILRB3O75022 631 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 PALMO75781 387 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 ABLIM3O94929 683 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 CA3P07451 260 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 KRT3P12035 628 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 CYP2F1P24903 491 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 GRIK1P39086 918 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 RGS19P49795 217 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 NDUFV1P49821 464 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 CACNA2D1P54289 1103 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 ARPP19P56211 112 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 ERVK-21P61565 698 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 RPL10AP62906 217 aaKnown RBP11.2□□□□□ -0.62
LEMD3-202ENST00000539442 SLC6A3Q01959 620 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 ADIGQ0VDE8 80 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 RAB33AQ14088 237 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 FAM102AQ5T9C2 384 aaPredicted RBP11.2□□□□□ -0.62
LEMD3-202ENST00000539442 OR6B2Q6IFH4 312 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 DCUN1D2Q6PH85 259 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 SYT10Q6XYQ8 523 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 RNF19BQ6ZMZ0 732 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 FAM183BPQ6ZVS7 135 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 SLC26A9Q7LBE3 791 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 ARCQ7LC44 396 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 TMC7Q7Z402 723 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 SLFN11Q7Z7L1 901 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 SIX6OS1Q8N1H7 587 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 ZNF461Q8TAF7 563 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 FNIP1Q8TF40 1166 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 WDR24Q96S15 920 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 KCNK16Q96T55 309 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 C17orf80Q9BSJ5 609 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 RHOBTB2Q9BYZ6 727 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 TMEM30AQ9NV96 361 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 ASNSD1Q9NWL6 643 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 DNAI1Q9UI46 699 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 MSRAQ9UJ68 235 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 JRKLQ9Y4A0 524 aa11.2□□□□□ -0.62
LEMD3-202ENST00000539442 GOLGA8SH3BPF8 625 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 MYO1FO00160 1098 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 ADAM12O43184 909 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 GLI1P08151 1106 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 HAPLN1P10915 354 aaPredicted RBP11.19□□□□□ -0.62
LEMD3-202ENST00000539442 LCP1P13796 627 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 MYOGP15173 224 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 ATF2P15336 505 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 RPL17P18621 184 aaKnown RBP11.19□□□□□ -0.62
LEMD3-202ENST00000539442 DNAJB2P25686 324 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 CASQ1P31415 396 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 MAN1A1P33908 653 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 SLC1A1P43005 524 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 TUFMP49411 452 aaKnown RBP11.19□□□□□ -0.62
LEMD3-202ENST00000539442 TKTL1P51854 596 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 MRPS5P82675 430 aaKnown RBP11.19□□□□□ -0.62
LEMD3-202ENST00000539442 SMC1AQ14683 1233 aaKnown RBP11.19□□□□□ -0.62
LEMD3-202ENST00000539442 EFHC1Q5JVL4 640 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 PDE12Q6L8Q7 609 aaKnown RBP11.19□□□□□ -0.62
LEMD3-202ENST00000539442 LLGL2Q6P1M3 1020 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 DAAM2Q86T65 1068 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 ATAD1Q8NBU5 361 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms