RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 YARSP54577 528 aaKnown RBP15.23■□□□□ 0.03
CDCA3-207ENST00000538862 GEMIN4P57678 1058 aaKnown RBP15.23■□□□□ 0.03
CDCA3-207ENST00000538862 TFAMQ00059 246 aaKnown RBP15.23■□□□□ 0.03
CDCA3-207ENST00000538862 CYP4A22Q5TCH4 519 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 ARMCX2Q7L311 632 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 ACTL9Q8TC94 416 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 FBF1Q8TES7 1133 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 DPF3Q92784 378 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 HAUS1Q96CS2 278 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 ANKRD36BP1Q96IX9 119 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 PAIP2Q9BPZ3 127 aaKnown RBP15.23■□□□□ 0.03
CDCA3-207ENST00000538862 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.23■□□□□ 0.03
CDCA3-207ENST00000538862 ZMYND8Q9ULU4 1186 aaPredicted RBP15.23■□□□□ 0.03
CDCA3-207ENST00000538862 PHTF1Q9UMS5 762 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 LOC102724159A0A0B4J2E5 919 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 LRCH4O75427 683 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 UNC5CO95185 931 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 SRGAP2CP0DJJ0 459 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 KDELR1P24390 212 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 ARL4CP56559 192 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 OTUD4Q01804 1114 aaKnown RBP15.22■□□□□ 0.03
CDCA3-207ENST00000538862 PWP2Q15269 919 aaKnown RBP15.22■□□□□ 0.03
CDCA3-207ENST00000538862 PTPN20Q4JDL3 420 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 DENND1BQ6P3S1 775 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 MPZL3Q6UWV2 235 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 MAMDC4Q6UXC1 1216 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 TSHZ1Q6ZSZ6 1077 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 FAM47EQ6ZV65 393 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 NECAB2Q7Z6G3 386 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 NAT8LQ8N9F0 302 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 ANKLE1Q8NAG6 615 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 ATP11CQ8NB49 1132 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 RNF149Q8NC42 400 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 ACSF2Q96CM8 615 aaPredicted RBP15.22■□□□□ 0.03
CDCA3-207ENST00000538862 PTPRHQ9HD43 1115 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 TXLNGQ9NUQ3 528 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 RABGEF1Q9UJ41 708 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 USH1CQ9Y6N9 552 aa15.22■□□□□ 0.03
CDCA3-207ENST00000538862 E7ESA3 106 aa15.21■□□□□ 0.03
CDCA3-207ENST00000538862 ACKR2O00590 384 aa15.21■□□□□ 0.03
CDCA3-207ENST00000538862 CST8O60676 142 aa15.21■□□□□ 0.03
CDCA3-207ENST00000538862 LGR5O75473 907 aa15.21■□□□□ 0.03
CDCA3-207ENST00000538862 TSHRP16473 764 aa15.21■□□□□ 0.03
CDCA3-207ENST00000538862 GPX6P59796 221 aa15.21■□□□□ 0.03
CDCA3-207ENST00000538862 ACAP1Q15027 740 aa15.21■□□□□ 0.03
CDCA3-207ENST00000538862 SETDB1Q15047 1291 aa15.21■□□□□ 0.03
CDCA3-207ENST00000538862 GJC2Q5T442 439 aaPredicted RBP15.21■□□□□ 0.03
CDCA3-207ENST00000538862 ZNF467Q7Z7K2 595 aaPredicted RBP15.21■□□□□ 0.03
CDCA3-207ENST00000538862 ARFGAP1Q8N6T3 406 aa15.21■□□□□ 0.03
CDCA3-207ENST00000538862 LRRC8CQ8TDW0 803 aa15.21■□□□□ 0.03
CDCA3-207ENST00000538862 PYROXD1Q8WU10 500 aa15.21■□□□□ 0.03
CDCA3-207ENST00000538862 CPT1BQ92523 772 aa15.21■□□□□ 0.03
CDCA3-207ENST00000538862 BCO2Q9BYV7 579 aa15.21■□□□□ 0.03
CDCA3-207ENST00000538862 EDF1O60869 148 aaKnown RBP15.21■□□□□ 0.02
CDCA3-207ENST00000538862 ZWINTO95229 277 aa15.21■□□□□ 0.02
CDCA3-207ENST00000538862 IL18RAPO95256 599 aa15.21■□□□□ 0.02
CDCA3-207ENST00000538862 CD19P15391 556 aa15.21■□□□□ 0.02
CDCA3-207ENST00000538862 CA4P22748 312 aa15.21■□□□□ 0.02
CDCA3-207ENST00000538862 IL1R2P27930 398 aa15.21■□□□□ 0.02
CDCA3-207ENST00000538862 ALDH3A1P30838 453 aa15.21■□□□□ 0.02
CDCA3-207ENST00000538862 RPA3P35244 121 aaPredicted RBP15.21■□□□□ 0.02
CDCA3-207ENST00000538862 PSMC1P62191 440 aaKnown RBP15.21■□□□□ 0.02
CDCA3-207ENST00000538862 MYO1EQ12965 1108 aa15.21■□□□□ 0.02
CDCA3-207ENST00000538862 DNAJC3Q13217 504 aa15.21■□□□□ 0.02
CDCA3-207ENST00000538862 KLHL38Q2WGJ6 581 aa15.21■□□□□ 0.02
CDCA3-207ENST00000538862 HP1BP3Q5SSJ5 553 aaPredicted RBP15.21■□□□□ 0.02
CDCA3-207ENST00000538862 ADGRD1Q6QNK2 874 aa15.21■□□□□ 0.02
CDCA3-207ENST00000538862 EEPD1Q7L9B9 569 aa15.21■□□□□ 0.02
CDCA3-207ENST00000538862 GIMAP7Q8NHV1 300 aa15.21■□□□□ 0.02
CDCA3-207ENST00000538862 RSAD2Q8WXG1 361 aa15.21■□□□□ 0.02
CDCA3-207ENST00000538862 DHRS4Q9BTZ2 278 aa15.21■□□□□ 0.02
CDCA3-207ENST00000538862 C11orf49Q9H6J7 331 aa15.21■□□□□ 0.02
CDCA3-207ENST00000538862 EBF2Q9HAK2 575 aa15.21■□□□□ 0.02
CDCA3-207ENST00000538862 PCDH10Q9P2E7 1040 aa15.21■□□□□ 0.02
CDCA3-207ENST00000538862 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.21■□□□□ 0.02
CDCA3-207ENST00000538862 ANK1P16157 1881 aa15.21■□□□□ 0.02
CDCA3-207ENST00000538862 LRRC37A2A6NM11 1700 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 GOLGA8SH3BPF8 625 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 ADCY6O43306 1168 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 CLUHO75153 1309 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 DCTN3O75935 186 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 KRT16P08779 473 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 CCND1P24385 295 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 RPL22P35268 128 aaKnown RBP15.2■□□□□ 0.02
CDCA3-207ENST00000538862 MSH2P43246 934 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 TFDP1Q14186 410 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 E2F5Q15329 346 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 ZNF667Q5HYK9 610 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 SPDYAQ5MJ70 313 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 HHATQ5VTY9 493 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 SCARA5Q6ZMJ2 495 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 PLPPR4Q7Z2D5 763 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 C4orf33Q8N1A6 199 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 CMASQ8NFW8 434 aaPredicted RBP15.2■□□□□ 0.02
CDCA3-207ENST00000538862 JOSD2Q8TAC2 188 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 MAK16Q9BXY0 300 aaKnown RBP15.2■□□□□ 0.02
CDCA3-207ENST00000538862 FZD8Q9H461 694 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 ACSS3Q9H6R3 686 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 ZWILCHQ9H900 591 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 KIF9Q9HAQ2 790 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms