RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 FAM172AQ8WUF8 416 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 FAXDC2Q96IV6 333 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 SLC4A5Q9BY07 1137 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 MED4Q9NPJ6 270 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 CRTAC1Q9NQ79 661 aa14.82□□□□□ -0.04
ACTN1-205ENST00000538545 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.82□□□□□ -0.047e-7■■■■□ 25.5
ACTN1-205ENST00000538545 DCDC2CA8MYV0 355 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 H0YGN5 161 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 ZNF143P52747 638 aaPredicted RBP14.81□□□□□ -0.04
ACTN1-205ENST00000538545 ITGA8P53708 1063 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 MAP3K7CLP57077 242 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 PIGZQ86VD9 579 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 TMEM209Q96SK2 561 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 DDX23Q9BUQ8 820 aaKnown RBP14.81□□□□□ -0.04
ACTN1-205ENST00000538545 WDR35Q9P2L0 1181 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 NFS1Q9Y697 457 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 TDRD15B5MCY1 1934 aaKnown RBP14.81□□□□□ -0.04
ACTN1-205ENST00000538545 GOLGA6CA6NDK9 693 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 XPOTO43592 962 aaKnown RBP14.81□□□□□ -0.04
ACTN1-205ENST00000538545 LIASO43766 372 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 TRUB2O95900 331 aaKnown RBP14.81□□□□□ -0.04
ACTN1-205ENST00000538545 GOLGA6DP0CG33 693 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 CDH6P55285 790 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 OTUD4Q01804 1114 aaKnown RBP14.81□□□□□ -0.04
ACTN1-205ENST00000538545 TAP1Q03518 808 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 ADIGQ0VDE8 80 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 TRIM71Q2Q1W2 868 aaKnown RBP14.81□□□□□ -0.04
ACTN1-205ENST00000538545 DSTYKQ6XUX3 929 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 UNC93AQ86WB7 457 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 GOLGA6L1Q8N7Z2 621 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 STKLD1Q8NE28 680 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 ACTL9Q8TC94 416 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 FAM149B1Q96BN6 582 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 RBM41Q96IZ5 413 aaKnown RBP14.81□□□□□ -0.04
ACTN1-205ENST00000538545 GLT1D1Q96MS3 346 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 SH3GL2Q99962 352 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 MED10Q9BTT4 135 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 AAASQ9NRG9 546 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 GOLGA6AQ9NYA3 693 aa14.81□□□□□ -0.04
ACTN1-205ENST00000538545 CKBP12277 381 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 LRPAP1P30533 357 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 SLC6A3Q01959 620 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 ZNF844Q08AG5 666 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 PPP2R5EQ16537 467 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 HFE2Q6ZVN8 426 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 GPRIN1Q7Z2K8 1008 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 TMEM110Q86TL2 294 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 RFX6Q8HWS3 928 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 CRYBG2Q8N1P7 616 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 MREGQ8N565 214 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 ANKRD52Q8NB46 1076 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 PCSK9Q8NBP7 692 aaKnown RBP14.8□□□□□ -0.04
ACTN1-205ENST00000538545 ATL2Q8NHH9 583 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 RSAD1Q9HA92 442 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 PTCH2Q9Y6C5 1203 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 A0A1W2PQ45 241 aaPredicted RBP14.8□□□□□ -0.04
ACTN1-205ENST00000538545 A0A1W2PQY0 241 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 PTPN1P18031 435 aaKnown RBP14.8□□□□□ -0.04
ACTN1-205ENST00000538545 GAD2Q05329 585 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 GABPB1Q06547 395 aaPredicted RBP14.8□□□□□ -0.04
ACTN1-205ENST00000538545 BST2Q10589 180 aaKnown RBP14.8□□□□□ -0.04
ACTN1-205ENST00000538545 BYSLQ13895 437 aaKnown RBP14.8□□□□□ -0.04
ACTN1-205ENST00000538545 SLC29A2Q14542 456 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 CCNG2Q16589 344 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 PPP6R3Q5H9R7 873 aaPredicted RBP14.8□□□□□ -0.04
ACTN1-205ENST00000538545 ZC3H18Q86VM9 953 aaKnown RBP14.8□□□□□ -0.04
ACTN1-205ENST00000538545 ADAM32Q8TC27 787 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 HCSTQ9UBK5 93 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 KIAA1257Q9ULG3 409 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 NR2E3Q9Y5X4 410 aa14.8□□□□□ -0.04
ACTN1-205ENST00000538545 FOXO6A8MYZ6 492 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 TJP3O95049 919 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 SLCO1A2P46721 670 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 HDAC4P56524 1084 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 CLUL1Q15846 466 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 HADHQ16836 314 aaKnown RBP14.79□□□□□ -0.04
ACTN1-205ENST00000538545 ALS2CLQ60I27 953 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 ZNF771Q7L3S4 317 aaPredicted RBP14.79□□□□□ -0.04
ACTN1-205ENST00000538545 FNIP1Q8TF40 1166 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 ART4Q93070 314 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 TXLNGYQ9BZA5 131 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 NEU2Q9Y3R4 380 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 TLDC2A0PJX2 215 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 GOLGA8MH3BSY2 632 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 ACSL3O95573 720 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 HPDP32754 393 aaPredicted RBP14.79□□□□□ -0.04
ACTN1-205ENST00000538545 PNPLA4P41247 253 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 PMS2P54278 862 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 BCAT1P54687 386 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 BCAR1P56945 870 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 UPP1Q16831 310 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 P3H1Q32P28 736 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 LRRC38Q5VT99 294 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 ARHGAP17Q68EM7 881 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 C1orf228Q6PIY5 440 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 ZNF365Q70YC5 407 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 ZNF280BQ86YH2 543 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 PYROXD2Q8N2H3 581 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 PCED1BQ96HM7 432 aa14.79□□□□□ -0.04
ACTN1-205ENST00000538545 CNPY3Q9BT09 278 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms